# STOCKHOLM 1.0 #=GF ID 2.130.10.10/FF/001011 #=GF DE Cleavage and polyadenylation specificity factor (CPSF) A subunit protein #=GF AC 2.130.10.10/FF/001011 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 81.115 #=GS Q84R20/47-301_359-469 AC Q84R20 #=GS Q84R20/47-301_359-469 OS Arabidopsis thaliana #=GS Q84R20/47-301_359-469 DE Cleavage and polyadenylation specificity factor (CPSF) A subunit protein #=GS Q84R20/47-301_359-469 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS D7TI88/33-295_342-455 AC D7TI88 #=GS D7TI88/33-295_342-455 OS Vitis vinifera #=GS D7TI88/33-295_342-455 DE Uncharacterized protein #=GS D7TI88/33-295_342-455 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS A0A2K1IHF4/29-306_355-466 AC A0A2K1IHF4 #=GS A0A2K1IHF4/29-306_355-466 OS Physcomitrella patens #=GS A0A2K1IHF4/29-306_355-466 DE Uncharacterized protein #=GS A0A2K1IHF4/29-306_355-466 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; #=GS A9SPK3/29-306_355-466 AC A9SPK3 #=GS A9SPK3/29-306_355-466 OS Physcomitrella patens #=GS A9SPK3/29-306_355-466 DE Predicted protein #=GS A9SPK3/29-306_355-466 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; #=GS A0A1D6HVI8/48-310_367-480 AC A0A1D6HVI8 #=GS A0A1D6HVI8/48-310_367-480 OS Zea mays #=GS A0A1D6HVI8/48-310_367-480 DE Cleavage and polyadenylation specificity factor (CPSF) A subunit protein #=GS A0A1D6HVI8/48-310_367-480 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS I1JQE1/39-352_386-464 AC I1JQE1 #=GS I1JQE1/39-352_386-464 OS Glycine max #=GS I1JQE1/39-352_386-464 DE Uncharacterized protein #=GS I1JQE1/39-352_386-464 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS D7KZM7/47-303_348-467 AC D7KZM7 #=GS D7KZM7/47-303_348-467 OS Arabidopsis lyrata subsp. lyrata #=GS D7KZM7/47-303_348-467 DE Predicted protein #=GS D7KZM7/47-303_348-467 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A1B6Q9S1/53-315_372-484 AC A0A1B6Q9S1 #=GS A0A1B6Q9S1/53-315_372-484 OS Sorghum bicolor #=GS A0A1B6Q9S1/53-315_372-484 DE Uncharacterized protein #=GS A0A1B6Q9S1/53-315_372-484 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS A0A1B6Q9P7/53-315_372-484 AC A0A1B6Q9P7 #=GS A0A1B6Q9P7/53-315_372-484 OS Sorghum bicolor #=GS A0A1B6Q9P7/53-315_372-484 DE Uncharacterized protein #=GS A0A1B6Q9P7/53-315_372-484 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS A0A1D6HVN0/48-310_367-480 AC A0A1D6HVN0 #=GS A0A1D6HVN0/48-310_367-480 OS Zea mays #=GS A0A1D6HVN0/48-310_367-480 DE Cleavage and polyadenylation specificity factor (CPSF) A subunit protein #=GS A0A1D6HVN0/48-310_367-480 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6HVM7/48-310_367-480 AC A0A1D6HVM7 #=GS A0A1D6HVM7/48-310_367-480 OS Zea mays #=GS A0A1D6HVM7/48-310_367-480 DE Cleavage and polyadenylation specificity factor (CPSF) A subunit protein #=GS A0A1D6HVM7/48-310_367-480 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS I1NAY8/39-337_386-460 AC I1NAY8 #=GS I1NAY8/39-337_386-460 OS Glycine max #=GS I1NAY8/39-337_386-460 DE Uncharacterized protein #=GS I1NAY8/39-337_386-460 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A0R0F241/39-337_386-460 AC A0A0R0F241 #=GS A0A0R0F241/39-337_386-460 OS Glycine max #=GS A0A0R0F241/39-337_386-460 DE Uncharacterized protein #=GS A0A0R0F241/39-337_386-460 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GF SQ 13 Q84R20/47-301_359-469 -VLQVAYGYFRSPSSRDIVFGKETCIELVVIGEDGIVESVCEQYVFGTIKDLAVIPQSSKLY-SNSLQM-GKDLLAVLSDSGKLSFLSFSNEMHRFSPIQHVQLSTPGNSRIQLGRMLTIDSSGLFLAVSAYHDRFALFSLSTSSMGD----IIHQRISYPSEDGGNGSSIQA----------ISGTIWSMCFISKDFN---E--SKEYAPILAIVINRKGSLMNELALFRWNVKEESICLISEYVET------GALAHSIVEVPHSSGFAFLFRIGDVLLMD--------RD-----HDPMFIDTESDIGKLSSKNVSSWTWEPENN---------------HNPRMIICLDNGDFFMFELIYED--DGVKVNLSECLYKGLPCKDILWIEGGFLATFAEMADGTVFKLGT-EKLHWMSSIQNI- D7TI88/33-295_342-455 VVLHVVHGRIRSPSFSDIVFGKETSLELVIIGEDGIVQSVCEQAVFGTIKDLAVLRWNERFH-HQNLQMQGRDLLVVVSDSGKLSFLRFCNEMHRFFPVTHVQLSSPGNLRNQLGQMLAIDSNGCFIATSAYEDRLAMFSISMATDSD----IIDKRIFYPPEIEGDSGVARSV-----HRTSISGTIWSMCFISKDLN--QP--SGGYNPVLAIILNRRGAVLTELVLLEWIIIENAVRVISQYAEA------GHVAHSIVEVPHSYGFAFLFRIGDALLMDS--ALLELKDYVAKGDDPMNVDGDSGMVKSTSKHVCALSWEPGNE---------------KNSRMIFCVDTGELFMIEISFDS--DGPKVNLSDCLYRGLSCKALLWFAGGFLAALVEMGDGMVLKLEQ-GRLV--------- A0A2K1IHF4/29-306_355-466 VVLHAVYGHIRCPSTFDVVLGKETSLELVVVSEDGIVQSVCEQPLFGTIKDLRVLPWNESRR-SPLPQTYEKDLLVLLSDSGKLSFLTFNVDLHRFLAVVHIHIAECGNLRRELGRLLAIESRGRAVAVAAFEDRIAIFPTSIAAGNN----IVDKRMIYPRELLSSTGLTEASTSGVEEKFTGWGTIWSMTFVGMPVDHLTPIVKSDSLLLLAVLVHRKGAASNEIVILKCDTKERIIQVTARYDSSVIRPFISPLWISVLDVPAAPGFLLLSLPGELLLLDS---PASSSNGEPTEVMDLNWDPSSLPT------ITAWSWEPYAE---------------GQSRLALAMDTGEIHLARLIFESPDDVPRIEVQQRQYKCSPCNVVLWTKGGLLAVFVEMGDGQVLQCSDNGKLIFK------- A9SPK3/29-306_355-466 VVLHAVYGHIRCPSTFDVVLGKETSLELVVVSEDGIVQSVCEQPLFGTIKDLRVLPWNESRR-SPLPQTYEKDLLVLLSDSGKLSFLTFNVDLHRFLAVVHIHIAECGNLRRELGRLLAIESRGRAVAVAAFEDRIAIFPTSIAAGNN----IVDKRMIYPRELLSSTGLTEASTSGVEEKFTGWGTIWSMTFVGMPVDHLTPIVKSDSLLLLAVLVHRKGAASNEIVILKCDTKERIIQVTARYDSSVIRPFISPLWISVLDVPAAPGFLLLSLPGELLLLDS---PASSSNGEPTEVMDLNWDPSSLPT------ITAWSWEPYAE---------------GQSRLALAMDTGEIHLARLIFESPDDVPRIEVQQRQYKCSPCNVVLWTKGGLLAVFVEMGDGQVLQCSDNGKLIFK------- A0A1D6HVI8/48-310_367-480 AVLHVAEGCFRSPDSADVVLAKETSLELVAVGDDGVLQSICEQDIFGIIKDIGVLQWHSRHN-GLIPQIECKDLLVVLSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLRHHLGRILAIDRESNFVAVSSYEDKFALIHVSVSQSGSGSGIISEKKYFYPPENEDDARIITS------SRTSIRGTIWTMRFISVPQD-------EEYYPVLAMIINRKGSDVNDLSLFGYDSSSCVINHLSSYSEI------GPLVLDVSEIPETFGFALLLRVGDALLLDD--------------DGYMDIDGVDSRSNVKPRIVCSWSWEPPDPVRR------------GCARLLFCLDDGEFHILEFTLDV--EGAKLYTFEYIDRTLPCRPLFWMKNRMIIGFVEMGDGMIFKLGH-RRLLHKSTIQNVA I1JQE1/39-352_386-464 VVLQVLHAHIRSPSSNDVIFGKETSIELVVIDEDGNVQSVCDQPVFGTVKDLAILPWNEKFRVARDPQLWGKDLLVATSDSGKLSLLTFCNEMHRFIPVTHIQLSNPGNQIYLPGRKLAVDSSGCFIASSAYEDRLALFSLSMSS-GD----IIDERIVYPSENEGTASTSRSI-----QRIGIRGTIWSICFISQDSR--QP--SKEHNPVLAVIINRRGALLNELLLLEWNVKAHKIFVISQYVEA------GPLAHDIVEVPNSGGLAFLFRAGDVLLMD----LRDHRNPSCVCKTNLNFLPNAMEEQTYVEESCKL-----HDVDDERFSVAACALLERDPRMIFCVDTGEFFMIEVLFDS--EGPKVNLSECLYKGLPCKALLWVESGYLAALVEMGDGMVLKLED-GRLCYINPIQNI- D7KZM7/47-303_348-467 -VLQVAYGYFRSLSSRDIVFGKETCIELVVIGEDGIVESVCEQYVFGTIKDLAVIPQSSKLY-SNSLQM-GKDLLAVLSDSGNLSFLSFSNEMHRFSPIQHVQLSTPGNSRIQLGRMLTIDSSGLFLAVSAYHDRFALFSLSTSSMGD----IIHERISYPSEDGGNGSSVQA----------ISGTIWSMCFISKDFND-SE--SKEYAPVFAIVINRIGSLMNELALFRWNVKEESMCLISEYVEA------GALAHSIVEVPHSSGFAFLFRIGDALLMDAACALLELSD-----HDPMFIDTESDIGKLSSKHVSSWTWEPENN---------------HNPRMIICLDDGEFYMFELIYED--DGVKVNLSECLYKGLPCKEILWVEGGFLATFAEMADGTVFKLGS-EKLHWMSSIQNIA A0A1B6Q9S1/53-315_372-484 AVLHVAEGCFRSPDSADVVLAKETSLELVAVGDDGVLQSICEQDMFGIIKDIGVLQWHSRHV-GLIPQIEHKDLLVVLSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLRHHLGRILAIDRESNFVAVSSYEDKFALIHVSVSQSGSGRGIISEKKYFYPPENEEDSRIISS------SRTSIRGTIWTMRFISIPQD-------EEYYPVLAMIINRKGSDVNDLSLFGYDTSSCVVDHISSYSEI------GPLALDISEIPEMFGFALLLRVGDALLLDD--------------DGYMDIDGVDSRGNVKPRIICSWSWEPPEPVRR------------GWARLLFCLDDGEFHILEFTLDV--EGVKLYTFEYIDRSLPCRPLFWMKNRMIIGFVEMGDGMIFKLGD-RRLFHKSTIQNV- A0A1B6Q9P7/53-315_372-484 AVLHVAEGCFRSPDSADVVLAKETSLELVAVGDDGVLQSICEQDMFGIIKDIGVLQWHSRHV-GLIPQIEHKDLLVVLSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLRHHLGRILAIDRESNFVAVSSYEDKFALIHVSVSQSGSGRGIISEKKYFYPPENEEDSRIISS------SRTSIRGTIWTMRFISIPQD-------EEYYPVLAMIINRKGSDVNDLSLFGYDTSSCVVDHISSYSEI------GPLALDISEIPEMFGFALLLRVGDALLLDD--------------DGYMDIDGVDSRGNVKPRIICSWSWEPPEPVRR------------GWARLLFCLDDGEFHILEFTLDV--EGVKLYTFEYIDRSLPCRPLFWMKNRMIIGFVEMGDGMIFKLGD-RRLFHKSTIQNV- A0A1D6HVN0/48-310_367-480 AVLHVAEGCFRSPDSADVVLAKETSLELVAVGDDGVLQSICEQDIFGIIKDIGVLQWHSRHN-GLIPQIECKDLLVVLSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLRHHLGRILAIDRESNFVAVSSYEDKFALIHVSVSQSGSGSGIISEKKYFYPPENEDDARIITS------SRTSIRGTIWTMRFISVPQD-------EEYYPVLAMIINRKGSDVNDLSLFGYDSSSCVINHLSSYSEI------GPLVLDVSEIPETFGFALLLRVGDALLLDD--------------DGYMDIDGVDSRSNVKPRIVCSWSWEPPDPVRR------------GCARLLFCLDDGEFHILEFTLDV--EGAKLYTFEYIDRTLPCRPLFWMKNRMIIGFVEMGDGMIFKLGH-RRLLHKSTIQNVA A0A1D6HVM7/48-310_367-480 AVLHVAEGCFRSPDSADVVLAKETSLELVAVGDDGVLQSICEQDIFGIIKDIGVLQWHSRHN-GLIPQIECKDLLVVLSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLRHHLGRILAIDRESNFVAVSSYEDKFALIHVSVSQSGSGSGIISEKKYFYPPENEDDARIITS------SRTSIRGTIWTMRFISVPQD-------EEYYPVLAMIINRKGSDVNDLSLFGYDSSSCVINHLSSYSEI------GPLVLDVSEIPETFGFALLLRVGDALLLDD--------------DGYMDIDGVDSRSNVKPRIVCSWSWEPPDPVRR------------GCARLLFCLDDGEFHILEFTLDV--EGAKLYTFEYIDRTLPCRPLFWMKNRMIIGFVEMGDGMIFKLGH-RRLLHKSTIQNVA I1NAY8/39-337_386-460 VVLHVLHAHIRSPSSNDVVFGKETSIELVVIDEDGNVQSVFDQPVFGTLKDLAILPWNEKFRAARDPQLWGKDLLVATSDSGKLSLLTFCNEMHRFVPVTHIQLSNPGNQMDFPGRKLAVDSSGCFIAASAYEDRLALFSLSMSS-GD----IIDERIVYPSESEGTASTSRSI-----QRTSISVTIWSICFISQDSR--QP--SKEHNPVLALIINRREALLNELLLLEWNVKARKIFVISQYVEA------GPLAHDIVEVPNSGGLAFLFRAGDVLLMD----LRDHRNPSCVCKTNLNFLPHAMEEQTYVEDSCKL-----HD---------------RDPKMIFCVDTGEFFMIEVLFNS--EGPKVNLSECLYKGLPCKALLWVEGGYLAALVEMGDGMVLKLED-GRLCYTNP----- A0A0R0F241/39-337_386-460 VVLHVLHAHIRSPSSNDVVFGKETSIELVVIDEDGNVQSVFDQPVFGTLKDLAILPWNEKFRAARDPQLWGKDLLVATSDSGKLSLLTFCNEMHRFVPVTHIQLSNPGNQMDFPGRKLAVDSSGCFIAASAYEDRLALFSLSMSS-GD----IIDERIVYPSESEGTASTSRSI-----QRTSISVTIWSICFISQDSR--QP--SKEHNPVLALIINRREALLNELLLLEWNVKARKIFVISQYVEA------GPLAHDIVEVPNSGGLAFLFRAGDVLLMD----LRDHRNPSCVCKTNLNFLPHAMEEQTYVEDSCKL-----HD---------------RDPKMIFCVDTGEFFMIEVLFNS--EGPKVNLSECLYKGLPCKALLWVEGGYLAALVEMGDGMVLKLED-GRLCYTNP----- #=GC scorecons 499775465597866397866999769995757995679777935996799657756555330433694248999755999989969395477999467467577469946336984977754636695767797596644956426500009556744994934444444361000002534646999674977353500120024753668956779676348774764554543372457494640000007684457477944397669464975996920001111220000033364454343333222325545455514411100000000000043576566595986564654564007647544465457468954669455646646799799576765405793333222220 #=GC scorecons_70 _****__*__***___*************_*_***_*******__*******_**_*_________**___*****__*********_*__*****__*_**_**_***____***_****__*_***_******_**___*_*__*_____*___*__**_*_________*__________*_******_***____________*__****_****_*___***_**________*___*_*_*_______***___*_***___*****_*_**_****__________________*____________________________________________**__*_*_***___*_______**_*____*___*_***__***_____*__*******_****____**__________ #=GC scorecons_80 _***______*_*___***__****_***___***__******__**__**__**____________*___*****__*******_*_*__*****_____*_*___**_____**_****______*___****_*____*__________*___*__**_*_______________________***_*_**__________________**____*_*___***_*_______________*___________*_____***___*___*___**_**_*_______________________________________________________________*_____*_**_______________*___________**____*_________******_*_*_____**__________ #=GC scorecons_90 _**_______*_____*_*__***__***____**___*___*__**__**________________*___****___*******_*_*____***___________**_____**_*_________*_____*__*____*__________*______**_*_______________________***___*___________________**____*_____*___________________*___________*_______*___*___*___*__**_*_____________________________________________________________________*_**___________________________**____*__________**_**__________*__________ //