# STOCKHOLM 1.0
#=GF ID 2.120.10.30/FF/000081
#=GF DE NHL repeat-containing protein 2
#=GF AC 2.120.10.30/FF/000081
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 73.957
#=GS Q8VZ10/547-703      AC Q8VZ10
#=GS Q8VZ10/547-703      OS Arabidopsis thaliana
#=GS Q8VZ10/547-703      DE Protein SUPPRESSOR OF QUENCHING 1, chloroplastic
#=GS Q8VZ10/547-703      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q8VZ10/547-703      DR GO; GO:0009507; GO:0009534; GO:0009570; GO:0010196; GO:0042651; 
#=GS Q5ZI67/211-364      AC Q5ZI67
#=GS Q5ZI67/211-364      OS Gallus gallus
#=GS Q5ZI67/211-364      DE NHL repeat-containing protein 2
#=GS Q5ZI67/211-364      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GS Q5ZI67/211-364      DR GO; GO:0005829; 
#=GS A0A178WG82/550-710  AC A0A178WG82
#=GS A0A178WG82/550-710  OS Arabidopsis thaliana
#=GS A0A178WG82/550-710  DE SOQ1
#=GS A0A178WG82/550-710  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A2K1INI9/579-730  AC A0A2K1INI9
#=GS A0A2K1INI9/579-730  OS Physcomitrella patens
#=GS A0A2K1INI9/579-730  DE Uncharacterized protein
#=GS A0A2K1INI9/579-730  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A9SEV6/529-676      AC A9SEV6
#=GS A9SEV6/529-676      OS Physcomitrella patens
#=GS A9SEV6/529-676      DE Predicted protein
#=GS A9SEV6/529-676      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A0A0P0VWM6/230-403  AC A0A0P0VWM6
#=GS A0A0P0VWM6/230-403  OS Oryza sativa Japonica Group
#=GS A0A0P0VWM6/230-403  DE Os03g0311300 protein
#=GS A0A0P0VWM6/230-403  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS W5N2G5/197-366      AC W5N2G5
#=GS W5N2G5/197-366      OS Lepisosteus oculatus
#=GS W5N2G5/197-366      DE Uncharacterized protein
#=GS W5N2G5/197-366      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS V4MEL6/606-768      AC V4MEL6
#=GS V4MEL6/606-768      OS Eutrema salsugineum
#=GS V4MEL6/606-768      DE Uncharacterized protein
#=GS V4MEL6/606-768      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A078HY95/551-709  AC A0A078HY95
#=GS A0A078HY95/551-709  OS Brassica napus
#=GS A0A078HY95/551-709  DE BnaA09g15360D protein
#=GS A0A078HY95/551-709  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS R0HX00/554-708      AC R0HX00
#=GS R0HX00/554-708      OS Capsella rubella
#=GS R0HX00/554-708      DE Uncharacterized protein
#=GS R0HX00/554-708      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS A0A0Q3MCF2/215-362  AC A0A0Q3MCF2
#=GS A0A0Q3MCF2/215-362  OS Amazona aestiva
#=GS A0A0Q3MCF2/215-362  DE NHL repeat-containing protein 2
#=GS A0A0Q3MCF2/215-362  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Psittaciformes; Psittacidae; Amazona; Amazona aestiva; 
#=GS A0A218UTK5/216-362  AC A0A218UTK5
#=GS A0A218UTK5/216-362  OS Lonchura striata domestica
#=GS A0A218UTK5/216-362  DE NHL repeat-containing protein 2
#=GS A0A218UTK5/216-362  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura; Lonchura striata; Lonchura striata domestica; 
#=GS A0A091G9T1/157-307  AC A0A091G9T1
#=GS A0A091G9T1/157-307  OS Cuculus canorus
#=GS A0A091G9T1/157-307  DE NHL repeat-containing protein 2
#=GS A0A091G9T1/157-307  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus; Cuculus canorus; 
#=GS A0A093GZ88/217-364  AC A0A093GZ88
#=GS A0A093GZ88/217-364  OS Picoides pubescens
#=GS A0A093GZ88/217-364  DE NHL repeat-containing protein 2
#=GS A0A093GZ88/217-364  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Piciformes; Picidae; Picoides; Picoides pubescens; 
#=GS U3J0R4/228-374      AC U3J0R4
#=GS U3J0R4/228-374      OS Anas platyrhynchos platyrhynchos
#=GS U3J0R4/228-374      DE NHL repeat containing 2
#=GS U3J0R4/228-374      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas; Anas platyrhynchos; Anas platyrhynchos platyrhynchos; 
#=GS F1NEF8/211-364      AC F1NEF8
#=GS F1NEF8/211-364      OS Gallus gallus
#=GS F1NEF8/211-364      DE NHL repeat-containing protein 2
#=GS F1NEF8/211-364      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GF SQ 16
Q8VZ10/547-703              -----------TPLPTRLEKDNDPRLATSPLKFPGKLAIDTLNNRLFISDSNHNRIIVTDLEGNFIVQIGSSGEEGFQDGSFEDAAFNRPQGLAYNAKKNLLYVADTENHALREIDFVNERVQTLAGNGTKGSDYQGGRKGTKQ------LLNSPWDVCFEP------VNEKVYIAMAGQ--------
Q5ZI67/211-364              --------------------DS---LPPSPLLFPGKVTVDKSGERLVIADTGHHRILVTLKNGQILHTIGGP-NSGRKDGRFSEAAFNSPQGVAI--KNNVIYVADTENHLIRKIDLELEIVTTVAGIGIQGVDKEGGAKGEEQ------PISSPWDVVFGNSVSGTQEDDVLWIAMAGIHQVWAL--
A0A178WG82/550-710          ---------------TRLEKDNDPRLATSPLKFPGKLAIDTLNNRLFISDSNHNRIIVTDLEGNFIVQIGSSGEEGFQDGSFEDAAFNRPQGLAYNAKKNLLYVADTENHALREIDFVNERVQTLAGNGTKGSDYQGGRKGTKQ------LLNSPWDVCFEP------VNEKVYIAMAGQHQIWEYSV
A0A2K1INI9/579-730          -----------------LERDKDSRLVASPLKFPGKLTTDLVNGRLFISDSNHHRIVVTDLDGNFIVNVGGG-GEGLKDGSFETSLFNRPQGVAYNAFKNVLYVADTENHALREIDLAKETVRTLAGNGIKGSDYRGGKKGSAQ------VLNSPWDVAHDA------EGGFVYIAMAGQHQ------
A9SEV6/529-676              ----------------SLERDKDSRLVASPLKFPGKLTTDLVNGRLFISDSNHHRIVVTDLDGNFIVNVGGG-GEGLKDGSFETSLFNRPQGVAYNAFKNVLYVADTENHALREIDLAKETVRTLAGNGIKGSDYRGGKKGSAQ------VLNSPWDVAHDA------EGGFVYIAM-----------
A0A0P0VWM6/230-403          EFYEENKLLQNSSLPLALEKDKDSRLLASPLKFPGKLAIDVLNNRLFISDSNHNRIVVTNLEGEFICQIGSS-EEGLLDGTFDTASFNRPQGLAYNSKKNILYVADTENHALREINFVSETVKTLAGNGTKGSDYRGGGQGTNQ------VLNSPWDVCYDP------SKETLYIAMAGQHQIWKHN-
W5N2G5/197-366              --YNDKRELKYNSIGLKLYRDS---LPPSILSFPGKVTVDRTGQRLVIADTGHHRILVVTKAGQLLHTVGGP-SSGRRDGGFAEAAFSSPQGVVM--RDDTIYVADTENHLIRKVDLLEGKVSTVAGIGIQGTDKCGGAMGPQQ------PISSPWDLALGS--AGGDEKNILWIAMAGTHQIWAL--
V4MEL6/606-768              --------LDSTPLPTRLEKDNDPRLAASPLKFPGKLAIDTLNNRLFISDSNHNRIIVTDLDGNFIVQIGSTGEEGFRDGSFEEAAFNRPQGLAYNAKKNLLYVADTENHALREIDFVNERVQTLAGNGTKGSDYQGGRKGTSQ------LLNSPWDVCFEP------VNEKVYVAMAGTHQI-----
A0A078HY95/551-709          ---------------TRLEKDNDPRLAASPLKFPGKLAIDTLNNRLFISDSNHNRIIVTDLDGNFIVQIGSTGEEGFRDGSFEDAAFNRPQGLAYNAKKNLLYVADTENHALREIDFVNERVETLAGNGTKGSDYQGGRKGTSQARKLDSLLNSPWDVCYEP------VKEKVYVAMAGQ--------
R0HX00/554-708              ---------------TRLEKDNDPRLATSPLKFPGKLAIDTLNNRLFISDSNHNRIIVTDLEGNFIVQIGSTGQEGFQDGSFEDAAFNRPQGLAYNAKKNLLYVADTENHALREIDFVNERVRTLAGNGTKGSDYQGGKKGIKQ------LLNSPWDVCFEP------VSEKVYIAMAGQHQ------
A0A0Q3MCF2/215-362          ---------------------------PSPLLFPGKVTVDHSGDRLVIADTGHHRILVARKNGQILHTIGGP-NSGRRDGRFSEAAFNSPQGIAI--KNDVIYVADTENHLIRKIDLVLEMVTTVAGIGIQGVDKEGGAKGEEQ------PISSPWDVVFGNSISGTQEDDVLWIAMAGTHQIW----
A0A218UTK5/216-362          ----------------------------SPLLFPGKVAVDDSGGRLVIADTGHHRILVTRKNGQILHTIGGP-NSGRRDGRFSEAAFNSPQGIAI--KNNVIYVADTENHLIRKIDLELQMVTTVAGIGVQGVDKEGGAKGEEQ------PISSPWDVVFGSSISGTQEDDVLWIAMAGIHQIW----
A0A091G9T1/157-307          --------------------DS---LPPSPLLFPGKVTVDDSGERLVIADTGHHRILVTRRNGQILHTIGGP-NSGRRDGRFSEAAFNSPQGVAI--KNNVIYVADTENHLIRKIDLELEMVTTVAGIGIQGVDKEGGAKGEEQ------PISSPWDVVFGNSIAGTQEDDVLWIAMAGTHQV-----
A0A093GZ88/217-364          -----------------------------PLLFPGKVTVDNSGERLVIADTGHHRILVTRRNGQILHTIGGP-NSGKRDGRFSEAAFNSPQGIAI--KDNIIYVADTENHLIRKIDLELEMVTTVAGIGIQGVDKEGGAKGEEQ------PISSPWDVVFGNSISGDQEDDVLWIAMAGTHQIWAL--
U3J0R4/228-374              ------------------------------LLFPGKVTVDNSGERLVIADTGHHRILVTQKNGQILHTIGGP-NSGRKDGRFSEASFNSPQGIAI--KNNVIYVADTENHLIRKIDLDLEIVTTVAGIGIQGVDKEGGAKGEEQ------PISSPWDVVFGNSVSETQEDDVLWIAMAGTHQIWAL--
F1NEF8/211-364              --------------------DS---LPPSPLLFPGKVTVDKSGERLVIADTGHHRILVTLKNGQILHTIGGP-NSGRKDGRFSEAAFNSPQGVAI--KNNVIYVADTENHLIRKIDLELEIVTTVAGIGIQGVDKEGGAKGEEQ------PISSPWDVVFGNSVSGTQEDDVLWIAMAGIHQVWAL--
#=GC scorecons              00000000000000011322522125236694999966693454995969659699597345955644796404593599494576985999584216575699999999569688643739496995956959449947944900000056699998465411111154536589977355320000
#=GC scorecons_70           ____________________________***_******_*____**_*_*__*_**_**___*__*__**_____*__**_*__*_**_***_*___*_*_*********_**_***__*_*_****_*_**_*__**_**__*_______*_*****_*____________*_*****_________
#=GC scorecons_80           ______________________________*_****___*____**_*_*__*_**_**___*_____**_____*__**_*__*_**_***_*_____*__********__*_**___*_*_*_**_*__*_*__**_**__*_________*****________________*****_________
#=GC scorecons_90           ______________________________*_****___*____**_*_*__*_**_*____*______*_____*__**_*____**_***_*________********__*_**_____*_*_**_*__*_*__**__*__*_________*****________________***___________
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