# STOCKHOLM 1.0
#=GF ID 2.10.70.10/FF/000096
#=GF DE Beta-2-glycoprotein 1
#=GF AC 2.10.70.10/FF/000096
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 40.707
#=GS 1qubA03/122-183     AC P02749
#=GS 1qubA03/122-183     OS Homo sapiens
#=GS 1qubA03/122-183     DE Beta-2-glycoprotein 1
#=GS 1qubA03/122-183     DR CATH; 1qub; A:122-183; 
#=GS 1qubA03/122-183     DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1qubA03/122-183     DR GO; GO:0001937; GO:0002576; GO:0005515; GO:0005543; GO:0005576; GO:0005615; GO:0006641; GO:0007597; GO:0008289; GO:0009986; GO:0010596; GO:0016525; GO:0030194; GO:0030195; GO:0031089; GO:0031639; GO:0033033; GO:0034197; GO:0034361; GO:0034364; GO:0034392; GO:0042627; GO:0042802; GO:0051006; GO:0051917; GO:0051918; GO:0060230; GO:0062023; GO:0070062; 
#=GS Q01339/141-201      AC Q01339
#=GS Q01339/141-201      OS Mus musculus
#=GS Q01339/141-201      DE Beta-2-glycoprotein 1
#=GS Q01339/141-201      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q01339/141-201      DR GO; GO:0001937; GO:0005543; GO:0005615; GO:0005737; GO:0005886; GO:0006641; GO:0007596; GO:0007597; GO:0008289; GO:0009986; GO:0010596; GO:0010898; GO:0016525; GO:0030193; GO:0030195; GO:0031100; GO:0031639; GO:0033033; GO:0034197; GO:0034361; GO:0034364; GO:0034392; GO:0042627; GO:0042802; GO:0051006; GO:0051917; GO:0051918; GO:0060230; GO:0060268; 
#=GS 1c1zA03/122-183     AC P02749
#=GS 1c1zA03/122-183     OS Homo sapiens
#=GS 1c1zA03/122-183     DE Beta-2-glycoprotein 1
#=GS 1c1zA03/122-183     DR CATH; 1c1z; A:122-183; 
#=GS 1c1zA03/122-183     DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1c1zA03/122-183     DR GO; GO:0001937; GO:0002576; GO:0005515; GO:0005543; GO:0005576; GO:0005615; GO:0006641; GO:0007597; GO:0008289; GO:0009986; GO:0010596; GO:0016525; GO:0030194; GO:0030195; GO:0031089; GO:0031639; GO:0033033; GO:0034197; GO:0034361; GO:0034364; GO:0034392; GO:0042627; GO:0042802; GO:0051006; GO:0051917; GO:0051918; GO:0060230; GO:0062023; GO:0070062; 
#=GS P02749/141-202      AC P02749
#=GS P02749/141-202      OS Homo sapiens
#=GS P02749/141-202      DE Beta-2-glycoprotein 1
#=GS P02749/141-202      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS P02749/141-202      DR GO; GO:0001937; GO:0002576; GO:0005515; GO:0005543; GO:0005576; GO:0005615; GO:0006641; GO:0007597; GO:0008289; GO:0009986; GO:0010596; GO:0016525; GO:0030194; GO:0030195; GO:0031089; GO:0031639; GO:0033033; GO:0034197; GO:0034361; GO:0034364; GO:0034392; GO:0042627; GO:0042802; GO:0051006; GO:0051917; GO:0051918; GO:0060230; GO:0062023; GO:0070062; 
#=GS A0A384NKM6/141-202  AC A0A384NKM6
#=GS A0A384NKM6/141-202  OS Homo sapiens
#=GS A0A384NKM6/141-202  DE Apolipoprotein H (Beta-2-glycoprotein I), isoform CRA_a
#=GS A0A384NKM6/141-202  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q9CY42/141-201      AC Q9CY42
#=GS Q9CY42/141-201      OS Mus musculus
#=GS Q9CY42/141-201      DE Uncharacterized protein
#=GS Q9CY42/141-201      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS A0A2K5EUF4/168-229  AC A0A2K5EUF4
#=GS A0A2K5EUF4/168-229  OS Aotus nancymaae
#=GS A0A2K5EUF4/168-229  DE Uncharacterized protein
#=GS A0A2K5EUF4/168-229  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS F6UM69/141-202      AC F6UM69
#=GS F6UM69/141-202      OS Macaca mulatta
#=GS F6UM69/141-202      DE Uncharacterized protein
#=GS F6UM69/141-202      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS A0A2K6U3X1/164-225  AC A0A2K6U3X1
#=GS A0A2K6U3X1/164-225  OS Saimiri boliviensis boliviensis
#=GS A0A2K6U3X1/164-225  DE Apolipoprotein H
#=GS A0A2K6U3X1/164-225  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri boliviensis; Saimiri boliviensis boliviensis; 
#=GS A0A2K5RQ27/150-211  AC A0A2K5RQ27
#=GS A0A2K5RQ27/150-211  OS Cebus capucinus imitator
#=GS A0A2K5RQ27/150-211  DE Uncharacterized protein
#=GS A0A2K5RQ27/150-211  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus; Cebus capucinus; Cebus capucinus imitator; 
#=GS G1QHF4/141-202      AC G1QHF4
#=GS G1QHF4/141-202      OS Nomascus leucogenys
#=GS G1QHF4/141-202      DE Uncharacterized protein
#=GS G1QHF4/141-202      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS F7H2U9/168-229      AC F7H2U9
#=GS F7H2U9/168-229      OS Callithrix jacchus
#=GS F7H2U9/168-229      DE Apolipoprotein H
#=GS F7H2U9/168-229      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS A0A2K5ILH0/141-202  AC A0A2K5ILH0
#=GS A0A2K5ILH0/141-202  OS Colobus angolensis palliatus
#=GS A0A2K5ILH0/141-202  DE Uncharacterized protein
#=GS A0A2K5ILH0/141-202  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis; Colobus angolensis palliatus; 
#=GS Q95LB0/141-202      AC Q95LB0
#=GS Q95LB0/141-202      OS Pan troglodytes
#=GS Q95LB0/141-202      DE Beta-2-glycoprotein 1
#=GS Q95LB0/141-202      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS A0A2K5XC11/141-202  AC A0A2K5XC11
#=GS A0A2K5XC11/141-202  OS Mandrillus leucophaeus
#=GS A0A2K5XC11/141-202  DE Uncharacterized protein
#=GS A0A2K5XC11/141-202  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Mandrillus; Mandrillus leucophaeus; 
#=GS A0A2K6QY04/141-202  AC A0A2K6QY04
#=GS A0A2K6QY04/141-202  OS Rhinopithecus roxellana
#=GS A0A2K6QY04/141-202  DE Uncharacterized protein
#=GS A0A2K6QY04/141-202  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; 
#=GS A0A096NTX8/141-202  AC A0A096NTX8
#=GS A0A096NTX8/141-202  OS Papio anubis
#=GS A0A096NTX8/141-202  DE Uncharacterized protein
#=GS A0A096NTX8/141-202  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; 
#=GS A0A2K5LFZ6/119-180  AC A0A2K5LFZ6
#=GS A0A2K5LFZ6/119-180  OS Cercocebus atys
#=GS A0A2K5LFZ6/119-180  DE Uncharacterized protein
#=GS A0A2K5LFZ6/119-180  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; 
#=GS G7PV74/141-202      AC G7PV74
#=GS G7PV74/141-202      OS Macaca fascicularis
#=GS G7PV74/141-202      DE Uncharacterized protein
#=GS G7PV74/141-202      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS A0A2R9C3R2/141-202  AC A0A2R9C3R2
#=GS A0A2R9C3R2/141-202  OS Pan paniscus
#=GS A0A2R9C3R2/141-202  DE Uncharacterized protein
#=GS A0A2R9C3R2/141-202  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; 
#=GS A0A2J8IXI4/141-202  AC A0A2J8IXI4
#=GS A0A2J8IXI4/141-202  OS Pan troglodytes
#=GS A0A2J8IXI4/141-202  DE APOH isoform 1
#=GS A0A2J8IXI4/141-202  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS A0A2K5EUI2/165-226  AC A0A2K5EUI2
#=GS A0A2K5EUI2/165-226  OS Aotus nancymaae
#=GS A0A2K5EUI2/165-226  DE Uncharacterized protein
#=GS A0A2K5EUI2/165-226  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS A0A2K5RQ38/141-202  AC A0A2K5RQ38
#=GS A0A2K5RQ38/141-202  OS Cebus capucinus imitator
#=GS A0A2K5RQ38/141-202  DE Uncharacterized protein
#=GS A0A2K5RQ38/141-202  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus; Cebus capucinus; Cebus capucinus imitator; 
#=GS A0A2K5EUG2/150-211  AC A0A2K5EUG2
#=GS A0A2K5EUG2/150-211  OS Aotus nancymaae
#=GS A0A2K5EUG2/150-211  DE Uncharacterized protein
#=GS A0A2K5EUG2/150-211  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS A0A2K5VLR0/129-190  AC A0A2K5VLR0
#=GS A0A2K5VLR0/129-190  OS Macaca fascicularis
#=GS A0A2K5VLR0/129-190  DE Uncharacterized protein
#=GS A0A2K5VLR0/129-190  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS A0A2K5VLM9/138-199  AC A0A2K5VLM9
#=GS A0A2K5VLM9/138-199  OS Macaca fascicularis
#=GS A0A2K5VLM9/138-199  DE Uncharacterized protein
#=GS A0A2K5VLM9/138-199  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS A0A2K5V4B0/153-214  AC A0A2K5V4B0
#=GS A0A2K5V4B0/153-214  OS Macaca fascicularis
#=GS A0A2K5V4B0/153-214  DE Uncharacterized protein
#=GS A0A2K5V4B0/153-214  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS A0A2K5VLP0/129-190  AC A0A2K5VLP0
#=GS A0A2K5VLP0/129-190  OS Macaca fascicularis
#=GS A0A2K5VLP0/129-190  DE Uncharacterized protein
#=GS A0A2K5VLP0/129-190  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GF SQ 28
1qubA03/122-183             ICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
Q01339/141-201              TCPPPPVPKFALLKDYRPSAGNNSLYQDTVVFKCLPHFAMIGNDTVMCTEQGNWTRLPECL-
1c1zA03/122-183             ICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
P02749/141-202              ICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
A0A384NKM6/141-202          ICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
Q9CY42/141-201              TCPPPPVPKFALLKDYRPSAGNNSLYQDTVVFKCLPHFAMIGNDTVMCTEQGNWTRLPECL-
A0A2K5EUF4/168-229          TCPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTMHGNWTKLPECRE
F6UM69/141-202              TCPPPSVPMFATLRVYKPSAGNNSFYQDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
A0A2K6U3X1/164-225          TCPPPSRPTFATLRVYKPSAGNNSLYQDTAVFECLPQHAMFGNDTITCTMHGNWTKLPECRE
A0A2K5RQ27/150-211          TCPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
G1QHF4/141-202              TCPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
F7H2U9/168-229              TCPPPSIPTFATLRVYKPSAGNNSLYQDTAVFQCLPQHAMFGNDTITCTLHGNWTKLPECRE
A0A2K5ILH0/141-202          TCPPPSVPMFATLRVYKPSAGNNSLYQDTAVFECLPQHAMFGNDTITCTTHGNWTTLPECRE
Q95LB0/141-202              TCPPPSIPTFATLHVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
A0A2K5XC11/141-202          TCPPPSVPMFATLRVYKPSAGNNSFYQDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
A0A2K6QY04/141-202          TCPPPSVPMFATLRVYKPSAGNNSLYQDTAVFECLPQHAMFGNDTITCTTHGNWTTLPECRE
A0A096NTX8/141-202          TCPPPSVPMFATLRVYKPSAGNNSFYQDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
A0A2K5LFZ6/119-180          TCPPPSVPMFATLRVYKPSAGNNSLYQDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
G7PV74/141-202              TCPPPSVPMFATLRVYKPSAGNNSFYQDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
A0A2R9C3R2/141-202          TCPPPSIPTFATLRVYKPSAGNNSLYRDTAAFECLPQHAMFGNDTITCTTHGNWTKLPECRE
A0A2J8IXI4/141-202          TCPPPSIPTFATLHVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
A0A2K5EUI2/165-226          TCPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTMHGNWTKLPECRE
A0A2K5RQ38/141-202          TCPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
A0A2K5EUG2/150-211          TCPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTMHGNWTKLPECRE
A0A2K5VLR0/129-190          TCPPPSVPMFATLRVYKPSAGNNSFYQDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
A0A2K5VLM9/138-199          TCPPPSVPMFATLRVYKPSAGNNSFYQDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
A0A2K5V4B0/153-214          TCPPPSVPMFATLRVYKPSAGNNSFYQDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
A0A2K5VLP0/129-190          TCPPPSVPMFATLRVYKPSAGNNSFYQDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECRE
#=GC scorecons              79999669499697597999999979699689699976996999976994799996999954
#=GC scorecons_70           ********_*****_**********************************_**********__
#=GC scorecons_80           *****__*_**_*__***********_**_**_****_**_*****_**_*****_****__
#=GC scorecons_90           _****__*_**_*__*_*******_*_**_**_***__**_****__**__****_****__
//