# STOCKHOLM 1.0
#=GF ID 2.10.70.10/FF/000104
#=GF DE Complement component 4 binding protein beta
#=GF AC 2.10.70.10/FF/000104
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 92.050
#=GS P20851/135-193        AC P20851
#=GS P20851/135-193        OS Homo sapiens
#=GS P20851/135-193        DE C4b-binding protein beta chain
#=GS P20851/135-193        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS P20851/135-193        DR GO; GO:0005515; GO:0005576; GO:0005615; GO:0005886; GO:0007596; GO:0009609; GO:0030449; GO:0045732; GO:0045959; GO:1903027; 
#=GS A8JUT1/105-161        AC A8JUT1
#=GS A8JUT1/105-161        OS Drosophila melanogaster
#=GS A8JUT1/105-161        DE Furrowed, isoform B
#=GS A8JUT1/105-161        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A8JUT1/105-161        DR GO; GO:0007156; GO:0007423; GO:0007476; GO:0030246; GO:0035317; GO:0042067; GO:0043296; GO:0050821; 
#=GS A2AVA0/2441-2493      AC A2AVA0
#=GS A2AVA0/2441-2493      OS Mus musculus
#=GS A2AVA0/2441-2493      DE Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1
#=GS A2AVA0/2441-2493      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS A2AVA0/2441-2493      DR GO; GO:0003682; GO:0005576; GO:0005615; 
#=GS Q9VIU9/306-361        AC Q9VIU9
#=GS Q9VIU9/306-361        OS Drosophila melanogaster
#=GS Q9VIU9/306-361        DE Hig-anchoring scaffold protein, isoform C
#=GS Q9VIU9/306-361        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VIU9/306-361        DR GO; GO:0043083; 
#=GS A0A1D5NSM8/1845-1902  AC A0A1D5NSM8
#=GS A0A1D5NSM8/1845-1902  OS Danio rerio
#=GS A0A1D5NSM8/1845-1902  DE Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing 1
#=GS A0A1D5NSM8/1845-1902  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A0A1D5NSM8/1845-1902  DR GO; GO:0001945; GO:0009913; 
#=GS Q9VYR4/524-580        AC Q9VYR4
#=GS Q9VYR4/524-580        OS Drosophila melanogaster
#=GS Q9VYR4/524-580        DE Furrowed, isoform A
#=GS Q9VYR4/524-580        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VYR4/524-580        DR GO; GO:0007156; GO:0007423; GO:0007476; GO:0030246; GO:0035317; GO:0042067; GO:0043296; GO:0050821; 
#=GS P91658/292-347        AC P91658
#=GS P91658/292-347        OS Drosophila melanogaster
#=GS P91658/292-347        DE Furrowed
#=GS P91658/292-347        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS P91658/292-347        DR GO; GO:0007156; GO:0007423; GO:0007476; GO:0030246; GO:0035317; GO:0042067; GO:0043296; GO:0050821; 
#=GS C3YKN8/241-302        AC C3YKN8
#=GS C3YKN8/241-302        OS Branchiostoma floridae
#=GS C3YKN8/241-302        DE Uncharacterized protein
#=GS C3YKN8/241-302        DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS A0A1I8QF32/296-350    AC A0A1I8QF32
#=GS A0A1I8QF32/296-350    OS Stomoxys calcitrans
#=GS A0A1I8QF32/296-350    DE Uncharacterized protein
#=GS A0A1I8QF32/296-350    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Muscinae; Stomoxyini; Stomoxys; Stomoxys calcitrans; 
#=GS A0A2R9AXB3/135-193    AC A0A2R9AXB3
#=GS A0A2R9AXB3/135-193    OS Pan paniscus
#=GS A0A2R9AXB3/135-193    DE Uncharacterized protein
#=GS A0A2R9AXB3/135-193    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; 
#=GS A0A2I2YWR4/134-192    AC A0A2I2YWR4
#=GS A0A2I2YWR4/134-192    OS Gorilla gorilla gorilla
#=GS A0A2I2YWR4/134-192    DE Complement component 4 binding protein beta
#=GS A0A2I2YWR4/134-192    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS A0A2J8QVR3/135-193    AC A0A2J8QVR3
#=GS A0A2J8QVR3/135-193    OS Pan troglodytes
#=GS A0A2J8QVR3/135-193    DE C4BPB isoform 1
#=GS A0A2J8QVR3/135-193    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS B4ILA4/524-580        AC B4ILA4
#=GS B4ILA4/524-580        OS Drosophila sechellia
#=GS B4ILA4/524-580        DE GM13230
#=GS B4ILA4/524-580        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A0A3B0KQ61/533-589    AC A0A3B0KQ61
#=GS A0A3B0KQ61/533-589    OS Drosophila guanche
#=GS A0A3B0KQ61/533-589    DE Blast:Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1
#=GS A0A3B0KQ61/533-589    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS B5DNH9/590-646        AC B5DNH9
#=GS B5DNH9/590-646        OS Drosophila pseudoobscura pseudoobscura
#=GS B5DNH9/590-646        DE Uncharacterized protein
#=GS B5DNH9/590-646        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B3NXM9/577-633        AC B3NXM9
#=GS B3NXM9/577-633        OS Drosophila erecta
#=GS B3NXM9/577-633        DE Uncharacterized protein
#=GS B3NXM9/577-633        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4PYN4/520-576        AC B4PYN4
#=GS B4PYN4/520-576        OS Drosophila yakuba
#=GS B4PYN4/520-576        DE Uncharacterized protein
#=GS B4PYN4/520-576        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4H0Z0/514-570        AC B4H0Z0
#=GS B4H0Z0/514-570        OS Drosophila persimilis
#=GS B4H0Z0/514-570        DE GL15841
#=GS B4H0Z0/514-570        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS G3R971/135-193        AC G3R971
#=GS G3R971/135-193        OS Gorilla gorilla gorilla
#=GS G3R971/135-193        DE Complement component 4 binding protein beta
#=GS G3R971/135-193        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS H2R859/134-192        AC H2R859
#=GS H2R859/134-192        OS Pan troglodytes
#=GS H2R859/134-192        DE C4BPB isoform 2
#=GS H2R859/134-192        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GF SQ 20
P20851/135-193                KSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYLV-GVQEQQC-----VDGEWSSALPVCKL
A8JUT1/105-161                ---WCPDPQPIAGGDVRFNDKRAGSTATYVCEPGYVLV-GEAIISC----GLGGEWSSKTPSCRF
A2AVA0/2441-2493              ------QPEEILNGIIHVQGLAYLSTTLYTCKPGFELV-GNATTLC----GENGQWLGGKPMCK-
Q9VIU9/306-361                ---VCPTPENPKNGKATYTTLAYNSVVSYECRYGYTLV-GESSSRC----GADRKWSGTLPTCK-
A0A1D5NSM8/1845-1902          --LSCPHPTLPKYGILKGANFTYGSKVTFSCEKGYVPL-EPIESQC----QSDLKWSREPHICQP
Q9VYR4/524-580                ---WCPDPQPIAGGDVRFNDKRAGSTATYVCEPGYVLV-GEAIISC----GLGGEWSSKTPSCRF
P91658/292-347                ---WCPDPQPIAGGDVRFNDKRAGSTATYFCEPGYVLV-GEAIISC----GLGGEWSSKTPSCR-
C3YKN8/241-302                ---NCGDPGRGIYAERHGESYTYLSEVRYECWEGYYLVAGDLRRRCTMDLDSNLKWEGSPPICLL
A0A1I8QF32/296-350            ---VCPTPENPKNGKATFTTLAYNSVVSYECRYGYTLV-GESSSRC----GADRKWSGLLPTC--
A0A2R9AXB3/135-193            KSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYLV-GVQEQQC-----VDGEWSSALPVCKL
A0A2I2YWR4/134-192            KSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYLV-GVQEQQC-----VDGEWSSALPVCKL
A0A2J8QVR3/135-193            KSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYLV-GVQEQQC-----VDGEWSSALPVCKL
B4ILA4/524-580                ---WCPDPQPIAGGDVRFNDKRAGSTATYVCEPGYVLV-GEAIISC----GLGGEWSSKTPSCRF
A0A3B0KQ61/533-589            ---WCPDPQRITGGNVRFSDKRAGSTATYTCEPGYVLV-GEAIISC----GLGGEWSSKTPSCRF
B5DNH9/590-646                ---WCPDPQRITGGNVRFSDKRAGSTATYTCEPGYVLV-GEAIISC----GLGGEWSSKTPSCRF
B3NXM9/577-633                ---WCPDPQPIAGGDVRFNDKRAGSTATYVCEPGYVLV-GEAIISC----GLGGEWSSKTPSCRF
B4PYN4/520-576                ---WCPDPQPIAGGNVRFNDKRAGSTATYVCEPGYVLV-GEAIISC----GLGGEWSSKTPSCRF
B4H0Z0/514-570                ---WCPDPQRITGGNVRFSDKRAGSTATYTCEPGYVLV-GEAIISC----GLGGEWSSKTPSCRF
G3R971/135-193                KSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYLV-GVQEQQC-----VDGEWSSALPVCKL
H2R859/134-192                KSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYLV-GVQEQQC-----VDGEWSSALPVCKL
#=GC scorecons                00027449444348344354344596558395368388084433490000345569763484953
#=GC scorecons_70             ____*__*_____*__________*___*_*__**_**_*_____*________***___*_*__
#=GC scorecons_80             ____*__*_____*__________*___*_*___*_**_*_____*_________*____*_*__
#=GC scorecons_90             _______*_____*__________*___*_*___*_**_*_____*_________*____*_*__
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