# STOCKHOLM 1.0
#=GF ID 2.10.25.10/FF/000554
#=GF DE Cubilin
#=GF AC 2.10.25.10/FF/000554
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 84.449
#=GS Q9JLB4/393-431      AC Q9JLB4
#=GS Q9JLB4/393-431      OS Mus musculus
#=GS Q9JLB4/393-431      DE Cubilin
#=GS Q9JLB4/393-431      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q9JLB4/393-431      DR GO; GO:0001701; GO:0005515; GO:0005737; GO:0005768; GO:0005783; GO:0005794; GO:0005798; GO:0005886; GO:0005903; GO:0005905; GO:0006898; GO:0007584; GO:0008144; GO:0009617; GO:0015889; GO:0016020; GO:0016324; GO:0020028; GO:0030135; GO:0030139; GO:0030492; GO:0030666; GO:0031526; GO:0032991; GO:0038023; GO:0038024; GO:0042366; GO:0042802; GO:0042803; GO:0042953; GO:0043202; GO:0045177; GO:0070062; GO:0070207; 
#=GS O60494/399-433      AC O60494
#=GS O60494/399-433      OS Homo sapiens
#=GS O60494/399-433      DE Cubilin
#=GS O60494/399-433      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS O60494/399-433      DR GO; GO:0001894; GO:0005515; GO:0005829; GO:0005886; GO:0006898; GO:0008144; GO:0009235; GO:0010008; GO:0015889; GO:0016020; GO:0016324; GO:0030139; GO:0031232; GO:0031526; GO:0034384; GO:0038023; GO:0038024; GO:0042359; GO:0042803; GO:0043202; GO:0070062; 
#=GS O70244/392-431      AC O70244
#=GS O70244/392-431      OS Rattus norvegicus
#=GS O70244/392-431      DE Cubilin
#=GS O70244/392-431      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS O70244/392-431      DR GO; GO:0001701; GO:0005515; GO:0005798; GO:0005886; GO:0005905; GO:0006766; GO:0006898; GO:0007584; GO:0008144; GO:0015889; GO:0016020; GO:0016324; GO:0020028; GO:0030135; GO:0030492; GO:0030666; GO:0031526; GO:0032991; GO:0038023; GO:0038024; GO:0042366; GO:0042802; GO:0043202; GO:0070207; 
#=GS Q9TU53/389-428      AC Q9TU53
#=GS Q9TU53/389-428      OS Canis lupus familiaris
#=GS Q9TU53/389-428      DE Cubilin
#=GS Q9TU53/389-428      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris; 
#=GS Q9TU53/389-428      DR GO; GO:0008144; GO:0016324; GO:0031526; 
#=GS W4YGW8/287-323      AC W4YGW8
#=GS W4YGW8/287-323      OS Strongylocentrotus purpuratus
#=GS W4YGW8/287-323      DE Uncharacterized protein
#=GS W4YGW8/287-323      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4ZFQ7/660-695      AC W4ZFQ7
#=GS W4ZFQ7/660-695      OS Strongylocentrotus purpuratus
#=GS W4ZFQ7/660-695      DE Uncharacterized protein
#=GS W4ZFQ7/660-695      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS A7RFK1/1225-1262    AC A7RFK1
#=GS A7RFK1/1225-1262    OS Nematostella vectensis
#=GS A7RFK1/1225-1262    DE Predicted protein
#=GS A7RFK1/1225-1262    DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; 
#=GS W4YL87/1604-1640    AC W4YL87
#=GS W4YL87/1604-1640    OS Strongylocentrotus purpuratus
#=GS W4YL87/1604-1640    DE Uncharacterized protein
#=GS W4YL87/1604-1640    DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS K7E808/176-214      AC K7E808
#=GS K7E808/176-214      OS Ornithorhynchus anatinus
#=GS K7E808/176-214      DE Uncharacterized protein
#=GS K7E808/176-214      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; 
#=GS F6UUU8/394-434      AC F6UUU8
#=GS F6UUU8/394-434      OS Monodelphis domestica
#=GS F6UUU8/394-434      DE Uncharacterized protein
#=GS F6UUU8/394-434      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Didelphimorphia; Didelphidae; Didelphinae; Monodelphis; Monodelphis domestica; 
#=GS F1MKV7/396-429      AC F1MKV7
#=GS F1MKV7/396-429      OS Bos taurus
#=GS F1MKV7/396-429      DE Cubilin
#=GS F1MKV7/396-429      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GS F6PK84/398-432      AC F6PK84
#=GS F6PK84/398-432      OS Equus caballus
#=GS F6PK84/398-432      DE Cubilin
#=GS F6PK84/398-432      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS A0A2U4B764/396-430  AC A0A2U4B764
#=GS A0A2U4B764/396-430  OS Tursiops truncatus
#=GS A0A2U4B764/396-430  DE cubilin
#=GS A0A2U4B764/396-430  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Cetacea; Odontoceti; Delphinidae; Tursiops; Tursiops truncatus; 
#=GS L9JA46/350-384      AC L9JA46
#=GS L9JA46/350-384      OS Tupaia chinensis
#=GS L9JA46/350-384      DE Cubilin
#=GS L9JA46/350-384      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Scandentia; Tupaiidae; Tupaia; Tupaia chinensis; 
#=GS M3WJ25/393-431      AC M3WJ25
#=GS M3WJ25/393-431      OS Felis catus
#=GS M3WJ25/393-431      DE Uncharacterized protein
#=GS M3WJ25/393-431      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; 
#=GS A0A384C737/396-430  AC A0A384C737
#=GS A0A384C737/396-430  OS Ursus maritimus
#=GS A0A384C737/396-430  DE cubilin
#=GS A0A384C737/396-430  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus; Ursus maritimus; 
#=GS A0A2K6S9U4/398-432  AC A0A2K6S9U4
#=GS A0A2K6S9U4/398-432  OS Saimiri boliviensis boliviensis
#=GS A0A2K6S9U4/398-432  DE Cubilin
#=GS A0A2K6S9U4/398-432  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri boliviensis; Saimiri boliviensis boliviensis; 
#=GS A0A2K5J5S1/399-433  AC A0A2K5J5S1
#=GS A0A2K5J5S1/399-433  OS Colobus angolensis palliatus
#=GS A0A2K5J5S1/399-433  DE Uncharacterized protein
#=GS A0A2K5J5S1/399-433  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis; Colobus angolensis palliatus; 
#=GS A0A3Q7UF60/396-430  AC A0A3Q7UF60
#=GS A0A3Q7UF60/396-430  OS Ursus arctos horribilis
#=GS A0A3Q7UF60/396-430  DE cubilin
#=GS A0A3Q7UF60/396-430  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus; Ursus arctos; Ursus arctos horribilis; 
#=GS F6Y2R6/283-317      AC F6Y2R6
#=GS F6Y2R6/283-317      OS Callithrix jacchus
#=GS F6Y2R6/283-317      DE Cubilin
#=GS F6Y2R6/283-317      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS H2N9V3/399-433      AC H2N9V3
#=GS H2N9V3/399-433      OS Pongo abelii
#=GS H2N9V3/399-433      DE Cubilin
#=GS H2N9V3/399-433      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS A0A096N5M0/399-433  AC A0A096N5M0
#=GS A0A096N5M0/399-433  OS Papio anubis
#=GS A0A096N5M0/399-433  DE Uncharacterized protein
#=GS A0A096N5M0/399-433  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; 
#=GS H2Q1P2/399-433      AC H2Q1P2
#=GS H2Q1P2/399-433      OS Pan troglodytes
#=GS H2Q1P2/399-433      DE Cubilin
#=GS H2Q1P2/399-433      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS A0A2K6M2Q2/206-240  AC A0A2K6M2Q2
#=GS A0A2K6M2Q2/206-240  OS Rhinopithecus bieti
#=GS A0A2K6M2Q2/206-240  DE Uncharacterized protein
#=GS A0A2K6M2Q2/206-240  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus bieti; 
#=GS A0A2K5YG47/399-433  AC A0A2K5YG47
#=GS A0A2K5YG47/399-433  OS Mandrillus leucophaeus
#=GS A0A2K5YG47/399-433  DE Uncharacterized protein
#=GS A0A2K5YG47/399-433  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Mandrillus; Mandrillus leucophaeus; 
#=GS A0A0D9RJY2/398-432  AC A0A0D9RJY2
#=GS A0A0D9RJY2/398-432  OS Chlorocebus sabaeus
#=GS A0A0D9RJY2/398-432  DE Uncharacterized protein
#=GS A0A0D9RJY2/398-432  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus; Chlorocebus sabaeus; 
#=GS A0A2K5P620/399-433  AC A0A2K5P620
#=GS A0A2K5P620/399-433  OS Cercocebus atys
#=GS A0A2K5P620/399-433  DE Uncharacterized protein
#=GS A0A2K5P620/399-433  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; 
#=GS A0A2K5USK6/399-433  AC A0A2K5USK6
#=GS A0A2K5USK6/399-433  OS Macaca fascicularis
#=GS A0A2K5USK6/399-433  DE Uncharacterized protein
#=GS A0A2K5USK6/399-433  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS A0A2R9AM34/399-433  AC A0A2R9AM34
#=GS A0A2R9AM34/399-433  OS Pan paniscus
#=GS A0A2R9AM34/399-433  DE Uncharacterized protein
#=GS A0A2R9AM34/399-433  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; 
#=GS F7GN59/398-432      AC F7GN59
#=GS F7GN59/398-432      OS Macaca mulatta
#=GS F7GN59/398-432      DE Cubilin
#=GS F7GN59/398-432      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS A0A452U8T7/400-434  AC A0A452U8T7
#=GS A0A452U8T7/400-434  OS Ursus maritimus
#=GS A0A452U8T7/400-434  DE Uncharacterized protein
#=GS A0A452U8T7/400-434  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus; Ursus maritimus; 
#=GS F6ZW56/399-433      AC F6ZW56
#=GS F6ZW56/399-433      OS Equus caballus
#=GS F6ZW56/399-433      DE Cubilin
#=GS F6ZW56/399-433      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS A0A3Q2L6K5/310-344  AC A0A3Q2L6K5
#=GS A0A3Q2L6K5/310-344  OS Equus caballus
#=GS A0A3Q2L6K5/310-344  DE Cubilin
#=GS A0A3Q2L6K5/310-344  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS A0A3Q2GV23/311-345  AC A0A3Q2GV23
#=GS A0A3Q2GV23/311-345  OS Equus caballus
#=GS A0A3Q2GV23/311-345  DE Cubilin
#=GS A0A3Q2GV23/311-345  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS F1PK03/389-428      AC F1PK03
#=GS F1PK03/389-428      OS Canis lupus familiaris
#=GS F1PK03/389-428      DE Cubilin
#=GS F1PK03/389-428      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris; 
#=GS F1LNU2/392-431      AC F1LNU2
#=GS F1LNU2/392-431      OS Rattus norvegicus
#=GS F1LNU2/392-431      DE Cubilin
#=GS F1LNU2/392-431      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GF SQ 36
Q9JLB4/393-431              -VRLSNMCSRHPCVNGQCIETVSSYFCKCDSGWFGQNCTE--
O60494/399-433              -------CLSHPCLNGQCIDTVSGYFCKCDSGWTGVNCTENI
O70244/392-431              CVRLSNICSRHPCVNGQCIETVSSYFCKCDSGWSGQNCTE--
Q9TU53/389-428              CAQLSDTCLSHPCLNGQCIETVSGYLCKCESGWAGINCTE--
W4YGW8/287-323              -----NECNQNPCVNGQCINTFGSYICICELGFQGTNCEENI
W4ZFQ7/660-695              -----DVCSSNPCVNGSCVNQCSSYTCQCDTGYSGINCQRD-
A7RFK1/1225-1262            NV---DNCYPNPCVNGVCKNKVNGYECACNPGYSGSTCATK-
W4YL87/1604-1640            NI---NDCLPPPCNNGSCIDDVNGYRCNCDPGYQGFNCTE--
K7E808/176-214              -VPLSTICESHPCVHGQCTATASGYQCTCNSGWGGPNCTE--
F6UUU8/394-434              CVPLSHICRSDPCVNGQCIETVSGYHCICDPGWEGINCTEN-
F1MKV7/396-429              -------CLSRPCVNGQCIETVSGYVCKCESGWTSVNCTEN-
F6PK84/398-432              -------CLSHPCLNGQCIETVSGYLCKCEAGWAGVNCTENI
A0A2U4B764/396-430          -------CLSHPCLNGQCHETVSGYLCNCESGWAGVNCTENI
L9JA46/350-384              -------CLSHPCLNGQCIDTVSGYFCKCESGWAGVNCTENI
M3WJ25/393-431              -VQLSNVCSNHPCLNGQCIETVSGYLCKCESGWAGINCTE--
A0A384C737/396-430          -------CQSHPCLNGQCIETVSGYLCKCESGWAGINCTENI
A0A2K6S9U4/398-432          ------VCQSHPCLNGQCLDTVSGYFCKCDSGWTGVNCTEN-
A0A2K5J5S1/399-433          -------CLSHPCLNGQCIDTVSGYFCKCDSGWTGVNCTENI
A0A3Q7UF60/396-430          -------CQSHPCLNGQCIETVSGYLCKCESGWAGINCTENI
F6Y2R6/283-317              -------CLSHPCLNGQCLDTVSGYFCKCDSGWTGVNCTENI
H2N9V3/399-433              -------CLSHPCLNGQCIDTVSGYFCKCDSGWTGVNCTENI
A0A096N5M0/399-433          -------CLSHPCLNGQCIDTVSGYFCQCDSGWTGVNCTENI
H2Q1P2/399-433              -------CLSHPCLNGQCIDTVSGYFCKCDSGWTGVNCTENI
A0A2K6M2Q2/206-240          -------CLSHPCLNGQCIDTVSGYFCKCDSGWTGVNCTENI
A0A2K5YG47/399-433          -------CLSHPCLNGQCIDTVSGYFCQCDSGWTGVNCTENI
A0A0D9RJY2/398-432          -------CLSHPCLNGQCIDTVSGYFCQCDSGWTGVNCTENI
A0A2K5P620/399-433          -------CLSHPCLNGQCIDTVSGYFCQCDSGWTGVNCTENI
A0A2K5USK6/399-433          -------CLSHPCLNGQCIDTVSGYFCQCDSGWTGVNCTENI
A0A2R9AM34/399-433          -------CLSHPCLNGQCIDTVSGYFCKCDSGWTGVNCTENI
F7GN59/398-432              -------CLSHPCLNGQCIDTVSGYFCQCDSGWTGVNCTENI
A0A452U8T7/400-434          -------CQSHPCLNGQCIETVSGYLCKCESGWAGINCTENI
F6ZW56/399-433              -------CLSHPCLNGQCIETVSGYLCKCEAGWAGVNCTENI
A0A3Q2L6K5/310-344          -------CLSHPCLNGQCIETVSGYLCKCEAGWAGVNCTENI
A0A3Q2GV23/311-345          -------CLSHPCLNGQCIETVSGYLCKCEAGWAGVNCTENI
F1PK03/389-428              CAQLSDTCLSHPCLNGQCIETVSGYLCKCESGWAGINCTE--
F1LNU2/392-431              CVRLSNICSRHPCVNGQCIETVSSYFCKCDSGWSGQNCTE--
#=GC scorecons              010001194569968969657777949596596484897732
#=GC scorecons_70           _______*__***_*****_*****_*_**_**_*_****__
#=GC scorecons_80           _______*___**_**_*___**_*_*_*__*__*_****__
#=GC scorecons_90           _______*___**_**_*______*_*_*__*__*_**____
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