# STOCKHOLM 1.0
#=GF ID 2.10.110.10/FF/000135
#=GF DE LIM domain-containing protein, putative
#=GF AC 2.10.110.10/FF/000135
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 91.777
#=GS Q55GV9/370-433       AC Q55GV9
#=GS Q55GV9/370-433       OS Dictyostelium discoideum
#=GS Q55GV9/370-433       DE Calponin homology and LIM domain-containing protein
#=GS Q55GV9/370-433       DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS Q55GV9/370-433       DR GO; GO:0001891; GO:0005515; GO:0005829; GO:0005938; GO:0008270; GO:0030863; GO:0045335; GO:0046847; GO:0050765; 
#=GS Q54MG8/762-825       AC Q54MG8
#=GS Q54MG8/762-825       OS Dictyostelium discoideum
#=GS Q54MG8/762-825       DE LIM-domain containing phosphatase
#=GS Q54MG8/762-825       DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS Q54MG8/762-825       DR GO; GO:0031271; GO:0048870; 
#=GS Q54EY5/573-634       AC Q54EY5
#=GS Q54EY5/573-634       OS Dictyostelium discoideum
#=GS Q54EY5/573-634       DE LIM domain protein
#=GS Q54EY5/573-634       DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS A0A0D1BUD7/974-1033  AC A0A0D1BUD7
#=GS A0A0D1BUD7/974-1033  OS Ustilago maydis 521
#=GS A0A0D1BUD7/974-1033  DE Chromosome 23, whole genome shotgun sequence
#=GS A0A0D1BUD7/974-1033  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS C3ZYB2/124-186       AC C3ZYB2
#=GS C3ZYB2/124-186       OS Branchiostoma floridae
#=GS C3ZYB2/124-186       DE Uncharacterized protein
#=GS C3ZYB2/124-186       DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS A9V9W5/326-386       AC A9V9W5
#=GS A9V9W5/326-386       OS Monosiga brevicollis
#=GS A9V9W5/326-386       DE Predicted protein
#=GS A9V9W5/326-386       DR ORG; Eukaryota; Choanoflagellida; Salpingoecidae; Monosiga; Monosiga brevicollis; 
#=GS B7Q042/197-256       AC B7Q042
#=GS B7Q042/197-256       OS Ixodes scapularis
#=GS B7Q042/197-256       DE LIM domain-containing protein, putative
#=GS B7Q042/197-256       DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GS F0ZPB7/552-612       AC F0ZPB7
#=GS F0ZPB7/552-612       OS Dictyostelium purpureum
#=GS F0ZPB7/552-612       DE Uncharacterized protein
#=GS F0ZPB7/552-612       DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS A0A0S2M5V8/482-542   AC A0A0S2M5V8
#=GS A0A0S2M5V8/482-542   OS Cryptococcus neoformans var. neoformans JEC21
#=GS A0A0S2M5V8/482-542   DE Uncharacterized protein
#=GS A0A0S2M5V8/482-542   DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A226B8E5/546-606   AC A0A226B8E5
#=GS A0A226B8E5/546-606   OS Cryptococcus neoformans var. grubii Bt85
#=GS A0A226B8E5/546-606   DE LIM domain-containing protein
#=GS A0A226B8E5/546-606   DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS Q55J32/482-542       AC Q55J32
#=GS Q55J32/482-542       OS Cryptococcus neoformans var. neoformans B-3501A
#=GS Q55J32/482-542       DE Uncharacterized protein
#=GS Q55J32/482-542       DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS J9VXG2/546-606       AC J9VXG2
#=GS J9VXG2/546-606       OS Cryptococcus neoformans var. grubii H99
#=GS J9VXG2/546-606       DE LIM domain-containing protein
#=GS J9VXG2/546-606       DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GF SQ 12
Q55GV9/370-433               ------EKDGTCGKCNGELVGSAISVMDKNFHPQCFKCDSCNKNLNQNDQIKKSPTTGNPLCGPCSSNNN--
Q54MG8/762-825               -----ELVGTKCDQCNQYIDGMFLKVNGKNLCPTCFRCFCCNEVLEGGKYFEK---NGESICEKCRNEDILK
Q54EY5/573-634               -----FVVHKICNVCEKPIYGTVVSAMNNTFHSECFVCSNCHSSFPDNEFYQY---ESKPWCATCIQNIT--
A0A0D1BUD7/974-1033          -------HKPRCNGCKKPVLGDLISALRAKWHPECFTCCSCDKPFEDTMFFVK---DGRPYDEACYKVLL--
C3ZYB2/124-186               EEDFFQYNAPRCRSCSNPITGGFIEAIESTWHPDCFVCQDNGTGMLMEGYMHW---LHPNFCRHWE------
A9V9W5/326-386               -----DAQVHDCHSCPYLITDAFVELDGKRYHRDCIKCVDCGVSLADSKYSLE---PRGIVCESCWASS---
B7Q042/197-256               -------FAPCCGKCGEFIIGRVIKAMNNNWHPNCFRCEICQMTLADQGFIKN---AGRALCHECNAKEK--
F0ZPB7/552-612               ------VVHKICNICDKPIFGTVVSAMNSTYHSECFKCSSCNSNFPDNEFYQY---EGKPWCGPCIQKMT--
A0A0S2M5V8/482-542           -------HKPKCKACTLPIPDIAINAMGAKWHKECFVCSRCHNDFANNLFFPK---DGTAICTICYEQVM-S
A0A226B8E5/546-606           -------HKPKCKACTLPIPDVAISAMGAKWHKECFVCSRCHNDFANNIFFPR---NGAAICTICYEQVM-S
Q55J32/482-542               -------HKPKCKACTLPIPDIAINAMGAKWHKECFVCSRCHNDFANNLFFPK---DGTAICTICYEQVM-S
J9VXG2/546-606               -------HKPKCKACTLPIPDVAISAMGAKWHKECFVCSRCHNDFANNIFFPR---NGAAICTICYEQVM-S
#=GC scorecons               000000033439439324736346465444474597393374335444264330003534373272322200
#=GC scorecons_70            ___________*__*___*____*_______*__**_*__*________*___________*__*_______
#=GC scorecons_80            ___________*__*___*____________*__**_*__*____________________*__*_______
#=GC scorecons_90            ___________*__*___________________*__*__________________________________
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