# STOCKHOLM 1.0
#=GF ID 1.25.40.690/FF/000004
#=GF DE Nucleoporin 98-96
#=GF AC 1.25.40.690/FF/000004
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 80.921
#=GS Q9VCH5/1467-1556      AC Q9VCH5
#=GS Q9VCH5/1467-1556      OS Drosophila melanogaster
#=GS Q9VCH5/1467-1556      DE Nuclear pore complex protein Nup98-Nup96
#=GS Q9VCH5/1467-1556      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VCH5/1467-1556      DR GO; GO:0000785; GO:0002230; GO:0005515; GO:0005634; GO:0005643; GO:0005700; GO:0005703; GO:0005704; GO:0005737; GO:0006405; GO:0006606; GO:0010628; GO:0017056; GO:0030718; GO:0030838; GO:0031490; GO:0034605; GO:0035075; GO:0035080; GO:0035167; GO:0036098; GO:0043922; GO:0044613; GO:0045944; GO:0046822; GO:0060261; GO:0071390; GO:0071733; GO:1990841; 
#=GS Q868A8/439-528        AC Q868A8
#=GS Q868A8/439-528        OS Drosophila melanogaster
#=GS Q868A8/439-528        DE Nucleoporin 98-96
#=GS Q868A8/439-528        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q868A8/439-528        DR GO; GO:0005515; GO:0005643; GO:0006606; GO:0010628; GO:0017056; GO:0030718; GO:0035167; GO:0044613; 
#=GS Q867M7/439-528        AC Q867M7
#=GS Q867M7/439-528        OS Drosophila melanogaster
#=GS Q867M7/439-528        DE Nucleoporin 98-96
#=GS Q867M7/439-528        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q867M7/439-528        DR GO; GO:0005515; GO:0005643; GO:0006606; GO:0010628; GO:0017056; GO:0030718; GO:0035167; GO:0044613; 
#=GS Q867M2/439-528        AC Q867M2
#=GS Q867M2/439-528        OS Drosophila melanogaster
#=GS Q867M2/439-528        DE Nucleoporin 98-96
#=GS Q867M2/439-528        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q867M2/439-528        DR GO; GO:0005515; GO:0005643; GO:0006606; GO:0010628; GO:0017056; GO:0030718; GO:0035167; GO:0044613; 
#=GS Q86G43/439-528        AC Q86G43
#=GS Q86G43/439-528        OS Drosophila melanogaster
#=GS Q86G43/439-528        DE Nucleoporin 98-96
#=GS Q86G43/439-528        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q86G43/439-528        DR GO; GO:0005515; GO:0005643; GO:0006606; GO:0010628; GO:0017056; GO:0030718; GO:0035167; GO:0044613; 
#=GS Q867W7/439-528        AC Q867W7
#=GS Q867W7/439-528        OS Drosophila melanogaster
#=GS Q867W7/439-528        DE Nucleoporin 98-96
#=GS Q867W7/439-528        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q867W7/439-528        DR GO; GO:0005515; GO:0005643; GO:0006606; GO:0010628; GO:0017056; GO:0030718; GO:0035167; GO:0044613; 
#=GS Q867H5/439-528        AC Q867H5
#=GS Q867H5/439-528        OS Drosophila melanogaster
#=GS Q867H5/439-528        DE Nucleoporin 98-96
#=GS Q867H5/439-528        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q867H5/439-528        DR GO; GO:0005515; GO:0005643; GO:0006606; GO:0010628; GO:0017056; GO:0030718; GO:0035167; GO:0044613; 
#=GS E9GRW5/582-671        AC E9GRW5
#=GS E9GRW5/582-671        OS Daphnia pulex
#=GS E9GRW5/582-671        DE Uncharacterized protein
#=GS E9GRW5/582-671        DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS Q7QBX5/1570-1660      AC Q7QBX5
#=GS Q7QBX5/1570-1660      OS Anopheles gambiae
#=GS Q7QBX5/1570-1660      DE AGAP002351-PA
#=GS Q7QBX5/1570-1660      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; 
#=GS A0A182Y7A1/1568-1658  AC A0A182Y7A1
#=GS A0A182Y7A1/1568-1658  OS Anopheles stephensi
#=GS A0A182Y7A1/1568-1658  DE Uncharacterized protein
#=GS A0A182Y7A1/1568-1658  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles stephensi; 
#=GS A0A182RCW1/1566-1656  AC A0A182RCW1
#=GS A0A182RCW1/1566-1656  OS Anopheles funestus
#=GS A0A182RCW1/1566-1656  DE Uncharacterized protein
#=GS A0A182RCW1/1566-1656  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; funestus group; funestus subgroup; Anopheles funestus; 
#=GS A0A182PA24/1560-1649  AC A0A182PA24
#=GS A0A182PA24/1560-1649  OS Anopheles epiroticus
#=GS A0A182PA24/1560-1649  DE Uncharacterized protein
#=GS A0A182PA24/1560-1649  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles epiroticus; 
#=GS B4HFZ0/1468-1557      AC B4HFZ0
#=GS B4HFZ0/1468-1557      OS Drosophila sechellia
#=GS B4HFZ0/1468-1557      DE GM23537
#=GS B4HFZ0/1468-1557      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4R252/1469-1558      AC B4R252
#=GS B4R252/1469-1558      OS Drosophila simulans
#=GS B4R252/1469-1558      DE Nup98
#=GS B4R252/1469-1558      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B3P8D7/1467-1555      AC B3P8D7
#=GS B3P8D7/1467-1555      OS Drosophila erecta
#=GS B3P8D7/1467-1555      DE GG12402
#=GS B3P8D7/1467-1555      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4PNY2/1462-1550      AC B4PNY2
#=GS B4PNY2/1462-1550      OS Drosophila yakuba
#=GS B4PNY2/1462-1550      DE Uncharacterized protein
#=GS B4PNY2/1462-1550      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS Q867Y8/440-529        AC Q867Y8
#=GS Q867Y8/440-529        OS Drosophila simulans
#=GS Q867Y8/440-529        DE Nucleoporin 98-96
#=GS Q867Y8/440-529        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GF SQ 17
Q9VCH5/1467-1556              --GKDLLSKKVSTHSYLEHMLDLLSCHRVNEACELAFSYDDANLALVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERLKMYMLAAGAP
Q868A8/439-528                --GKDLLSKKVSTHSYLEHMLDLLSCHRVNEACELAFSYDDANLALVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERLKMYMLAAGAP
Q867M7/439-528                --GKDLLSKKVSTHSYLEHMLDLLSCHRVNEACELAFSYDDANLALVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERLKMYMLAAGAP
Q867M2/439-528                --GKDLLSKKVSTHSYLEHMLDLLSCHRVNEACELAFSYDDANLALVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERLKMYMLAAGAP
Q86G43/439-528                --GKDLLSKKVSTHSYLEHMLDLLSCHRVNEACELAFSYDDANLALVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERLKMYMLAAGAP
Q867W7/439-528                --GKDLLSKKVSTHSYLEHMLDLLSCHRVNEACELAFSYDDANLALVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERLKMYMLAAGAP
Q867H5/439-528                --GKDLLSKKVSTHSYLEHMLDLLSCHRVNEACELAFSYDDANLALVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERLKMYMLAAGAP
E9GRW5/582-671                --METNITGLNEEEEVFITFFKMLSRHDVAGAARLAHKNGEYYLALLISQAGSSLAFKGMLQRQLNLWTENRADAFITQDRLRVFALLAGIT
Q7QBX5/1570-1660              TIRSQQSSKKGEKRDYLDQLLELIQTHKVLEACELAFTNNDINLAMLLAQISGGPVVRQLLQHQLTCWQDSEADKFIDPRRLEAFMAIAGI-
A0A182Y7A1/1568-1658          TIHSQQTSKRAEKRDYLDQLLELIHTHKVLEACELAFTNNDINLAMLLAQISGGPVVRQLLQHQLSYWQDSEADKFIDPRRLEAFMAIAGV-
A0A182RCW1/1566-1656          TIRSQKNSNRGEKHDYLDQLLELIHTHKVLEACELAFTNNDINLAMLLAQISGGPVVRQLLQHQLTCWQDSEADKFIDPRRLEVFMAIAGI-
A0A182PA24/1560-1649          -MRSQQNSKNGEKRDYLDQLLELIHTHKVLEACDLAFNNNDINLAMLMAQISGGPVVRQLLQHQLTCWQDSEADKFIDPRRLEAYMAIAGI-
B4HFZ0/1468-1557              --GKDLLSKKVSTHSYLEHMLDLLSCHRVNEACELAFSYDDANLALVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERLKMYMLAAGAP
B4R252/1469-1558              --GKDLLSKKVSTHSYLEHMLDLLSCHRVNEACELAFSYDDANLALVLSQLSSGAVFRLLMEEQLFAWQQSKSDKHIDLERLKMYMLAAGAP
B3P8D7/1467-1555              --GKDLLSKKVSTHSYLDHMLELLSCHRVNEACELAFNYDDANLALVLSQLSSGAVFRLLMEEQLFAWQQSKADKYIDLERLKMYMLAAGV-
B4PNY2/1462-1550              --GKDLLSKKVSTHSYLDHMLELLSCHRVNEACELAFNYDDANLALVLSQLSSGAVFRLLMEEQLFAWQQSKADKYIDLERLKMYMLAAGV-
Q867Y8/440-529                --GKDLLSKKVSTHSYLEHMLDLLSCHRVNEACELAFSYDDANLALVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERLKMYMLAAGAP
#=GC scorecons                00444347654545567555767654959479769974558479966769576757584766599449757569779745995577559951
#=GC scorecons_70             _______**______**___*_**__*_*_*******___*_******_*_*_*_*_*_***_**__**_*__*****__**__**__**__
#=GC scorecons_80             _______*________*___*_*___*_*_***_***___*_***____*_*_*_*_*_*___**__**_*__**_**__**__**__**__
#=GC scorecons_90             __________________________*_*__*__**_______**____*_____________**__*_____*__*___**______**__
//