# STOCKHOLM 1.0
#=GF ID 1.25.40.470/FF/000020
#=GF DE Intraflagellar transport protein 172
#=GF AC 1.25.40.470/FF/000020
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 71.577
#=GS Q38CC3/597-761      AC Q38CC3
#=GS Q38CC3/597-761      OS Trypanosoma brucei brucei TREU927
#=GS Q38CC3/597-761      DE Uncharacterized protein
#=GS Q38CC3/597-761      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q38CC3/597-761      DR GO; GO:0030990; GO:0030992; GO:0031514; GO:0035735; GO:0036064; 
#=GS Q4QC98/632-791      AC Q4QC98
#=GS Q4QC98/632-791      OS Leishmania major
#=GS Q4QC98/632-791      DE Uncharacterized protein
#=GS Q4QC98/632-791      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4QC98/632-791      DR GO; GO:0030990; GO:0031514; GO:0035735; GO:0036064; 
#=GS D0P1I6/597-770      AC D0P1I6
#=GS D0P1I6/597-770      OS Phytophthora infestans T30-4
#=GS D0P1I6/597-770      DE Intraflagellar transport protein 172
#=GS D0P1I6/597-770      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS A0A0P1AMT9/600-773  AC A0A0P1AMT9
#=GS A0A0P1AMT9/600-773  OS Plasmopara halstedii
#=GS A0A0P1AMT9/600-773  DE Intraflagellar transport protein 172
#=GS A0A0P1AMT9/600-773  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Plasmopara; Plasmopara halstedii; 
#=GS A0A1G4II58/597-761  AC A0A1G4II58
#=GS A0A1G4II58/597-761  OS Trypanosoma equiperdum
#=GS A0A1G4II58/597-761  DE Intraflagellar transport protein 172
#=GS A0A1G4II58/597-761  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS W2X0B0/598-769      AC W2X0B0
#=GS W2X0B0/598-769      OS Phytophthora parasitica CJ01A1
#=GS W2X0B0/598-769      DE Uncharacterized protein
#=GS W2X0B0/598-769      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A0W8CP87/598-769  AC A0A0W8CP87
#=GS A0A0W8CP87/598-769  OS Phytophthora nicotianae
#=GS A0A0W8CP87/598-769  DE Intraflagellar transport protein
#=GS A0A0W8CP87/598-769  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS A0A3R7NKQ8/599-768  AC A0A3R7NKQ8
#=GS A0A3R7NKQ8/599-768  OS Phytophthora kernoviae
#=GS A0A3R7NKQ8/599-768  DE Uncharacterized protein
#=GS A0A3R7NKQ8/599-768  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora kernoviae; 
#=GS A0A329T0B6/600-768  AC A0A329T0B6
#=GS A0A329T0B6/600-768  OS Phytophthora cactorum
#=GS A0A329T0B6/600-768  DE Intraflagellar transport protein
#=GS A0A329T0B6/600-768  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora cactorum; 
#=GS H3GS66/598-766      AC H3GS66
#=GS H3GS66/598-766      OS Phytophthora ramorum
#=GS H3GS66/598-766      DE Uncharacterized protein
#=GS H3GS66/598-766      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS G4ZDC3/598-773      AC G4ZDC3
#=GS G4ZDC3/598-773      OS Phytophthora sojae strain P6497
#=GS G4ZDC3/598-773      DE Uncharacterized protein
#=GS G4ZDC3/598-773      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora sojae; 
#=GS W2L3N1/598-769      AC W2L3N1
#=GS W2L3N1/598-769      OS Phytophthora parasitica
#=GS W2L3N1/598-769      DE Uncharacterized protein
#=GS W2L3N1/598-769      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS V9F1Y0/598-769      AC V9F1Y0
#=GS V9F1Y0/598-769      OS Phytophthora parasitica P1569
#=GS V9F1Y0/598-769      DE Uncharacterized protein
#=GS V9F1Y0/598-769      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2R7D1/587-762      AC W2R7D1
#=GS W2R7D1/587-762      OS Phytophthora parasitica INRA-310
#=GS W2R7D1/587-762      DE Uncharacterized protein
#=GS W2R7D1/587-762      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A081A5G7/598-768  AC A0A081A5G7
#=GS A0A081A5G7/598-768  OS Phytophthora parasitica P1976
#=GS A0A081A5G7/598-768  DE Uncharacterized protein
#=GS A0A081A5G7/598-768  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2IZB2/598-769      AC W2IZB2
#=GS W2IZB2/598-769      OS Phytophthora parasitica
#=GS W2IZB2/598-769      DE Uncharacterized protein
#=GS W2IZB2/598-769      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2Z8S8/598-769      AC W2Z8S8
#=GS W2Z8S8/598-769      OS Phytophthora parasitica P10297
#=GS W2Z8S8/598-769      DE Uncharacterized protein
#=GS W2Z8S8/598-769      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GF SQ 17
Q38CC3/597-761              ----LDEALIEFGTAMEDHDYIKACDLLDQIALTPETEAMWANLASLALQELKLPIAQRCYAALGDMAKVNSLNQINELAVSEARSSGGATDGYDHYAVRAELSMLNKDYKQAEQLYLENAKIEDAMAMWEELNRFDESISIAEARGWPDLANKRTRYYNWLVETGQFE--------------
Q4QC98/632-791              VAYSLDESLIEFRAAMEERDLDRACDLLERTSLSPGTEVMWSTLANVSLQEMKLFIAERCYAALGDVAKVNALQRIHQLAAKARVDSADTTTGYEHYTVLAELYMMSQDFKRAEQLFLENGRVEDAMQMWEEMNCFDESLAIAESRGLDDVANRRARYFA-----------------------
D0P1I6/597-770              ---QLDESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSQEALTQNDHRIAERCAAALGDVTRSRYLRKLNKLDWQEK----DRLNGLAHWKVRARLAVLKNDYRSAEHLLLAQGQVDEAIEMYQHLHKWEDAIRVAETKNHSGCEQMKRSYYEYLVESRQEEKAAAVKVKDGDY--
A0A0P1AMT9/600-773          -----DESLISFGAAVDDRQLVKAMSILEPLELTPEVEAMWSQLSQEALAYNDHRIAERCAAALGDVARSRYLRKLNKLDWQEL----DRLNGLAHWKVRARLAVLKNDYRSAEHLLLAQGQVDEAIEMYQHLHKWEDAIRVAEVKNHAGCDQMKRSYYDYLVESRQEEKAAAVKVKDGDYAS
A0A1G4II58/597-761          ----LDEALIEFGTAMEDHDYIKACDLLDQIALTPETEAMWANLASLALQELKLPIAQRCYAALGDMAKVNSLNQINELAVSEARSSGGATDGYDHYAVRAELSMLNKDYKQAEQLYLENAKIEDAMAMWEELNRFDESISIAEARGWPDLANKRTRYYNWLVETGQFE--------------
W2X0B0/598-769              ---QLDESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSQEALTQNDHRIAERCAAALGDVARSRYLRKLNKLDWQEK----DRLNGLAHWKVRARLAVLKNDYRSAEHLLLAQGQVDEAIEMYQHLHKWEDAIRVAEAKNHSGCEQMKRSYYDYLVESRQEEKAAAVKVKDG----
A0A0W8CP87/598-769          ---QLDESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSQEALTQNDHRIAERCAAALGDVARSRYLRKLNKLDWQEK----DRLNGLAHWKVRARLAVLKNDYRSAEHLLLAQGQVDEAIEMYQHLHKWEDAIRVAEAKNHSGCEQMKRSYYDYLVESRQEEKAAAVKVKDG----
A0A3R7NKQ8/599-768          ----LDESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSQEALVQNDHRIAERCAAALGDVARSRYLRKLNKLDWQEK----DRLNGIAHWKVRARLAVLKNDYRSAEHLLLAQGQVDEAIEMYQHLHKWEDSIRVAEAKNHSGCEQMKRNYYDYLVESRQEEKAAAVKVKE-----
A0A329T0B6/600-768          -----DESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSQEALTQNDHRIAERCAAALGDVARSRYLRKLNKLDWQEK----DRLNGLAHWKVRARLAVLKNDYRSAEHLLLAQGQVDEAIEMYQHLHKWEDAIRVAEAKNHSGCEQMKRSYYDYLVESRQEEKAAAVKVKD-----
H3GS66/598-766              ---QLDESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSLEALTQNDHRIAERCAAALGDVARSRYLRKLNKLDWQEK----DRLNGLAHWKVRAQLAVLKNDYRSAEHLLLAQGQVDETIEMYQHLHKWEDAIRVAEAKNHAGCEQMKRSYYDYLVESRQEEKAAAVKV-------
G4ZDC3/598-773              ---QLDESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSQEALAQNDHRIAERCAAALGDVARSRYLRKLNKLDWQEK----DRLNGLAHWKVRAKLAVLKNDYRSAEHLLLAQGQVDEAIEMYQHLHKWEDAIRVAEAKNHAECEQMKRSYYDYLVESRQEEKAAAVKVKDGDYAS
W2L3N1/598-769              ---QLDESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSQEALTQNDHRIAERCAAALGDVARSRYLRKLNKLDWQEK----DRLNGLAHWKVRARLAVLKNDYRSAEHLLLAQGQVDEAIEMYQHLHKWEDAIRVAEAKNHSGCEQMKRSYYDYLVESRQEEKAAAVKVKDG----
V9F1Y0/598-769              ---QLDESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSQEALTQNDHRIAERCAAALGDVARSRYLRKLNKLDWQEK----DRLNGLAHWKVRARLAVLKNDYRSAEHLLLAQGQVDEAIEMYQHLHKWEDAIRVAEAKNHSGCEQMKRSYYDYLVESRQEEKAAAVKVKDG----
W2R7D1/587-762              ---QLDESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSQEALTQNDHRIAERCAAALGDVARSRYLRKLNKLDWQEK----DRLNGLAHWKVRARLAVLKNDYRSAEHLLLAQGQVDEAIEMYQHLHKWEDAIRVAEAKNHSGCEQMKRSYYDYLVESRQEEKAAAVKVKDGDYAG
A0A081A5G7/598-768          ---QLDESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSQEALTQNDHRIAERCAAALGDVARSRYLRKLNKLDWQEK----DRLNGLAHWKVRARLAVLKNDYRSAEHLLLAQGQVDEAIEMYQHLHKWEDAIRVAEAKNHSGCEQMKRSYYDYLVESRQEEKAAAVKVKD-----
W2IZB2/598-769              ---QLDESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSQEALTQNDHRIAERCAAALGDVARSRYLRKLNKLDWQEK----DRLNGLAHWKVRARLAVLKNDYRSAEHLLLAQGQVDEAIEMYQHLHKWEDAIRVAEAKNHSGCEQMKRSYYDYLVESRQEEKAAAVKVKDG----
W2Z8S8/598-769              ---QLDESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSQEALTQNDHRIAERCAAALGDVARSRYLRKLNKLDWQEK----DRLNGLAHWKVRARLAVLKNDYRSAEHLLLAQGQVDEAIEMYQHLHKWEDAIRVAEAKNHSGCEQMKRSYYDYLVESRQEEKAAAVKVKDG----
#=GC scorecons              000179969959769677456559556975549797897996596447945455499699499999687554956675953564001064559559549695946755987499695955667778659565765577674799675445455474598546664463622222222210000
#=GC scorecons_70           ____******_*******_____*__***___**********_*___**______*****_********___*__**_*___*_____*___*__*__***_*_**__***_****_*__*_*****_*_*_*___**_*_*****________*__**________________________
#=GC scorecons_80           ____***_**_*__*__*_____*___**___*********__*___**______**_**_*****_*____*___*_*_____________*__*__*_*_*__*__**__**_*_*____*__*__*___*______*__**_____________**________________________
#=GC scorecons_90           _____**_**_*__*________*___*____*_*_**_**__*____*______**_**_*****_*____*_____*_____________*__*__*_*_*_____*___**_*_*_______*__*_____________**_____________*_________________________
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