# STOCKHOLM 1.0
#=GF ID 1.25.40.430/FF/000006
#=GF DE Pre-mRNA-splicing factor SYF1
#=GF AC 1.25.40.430/FF/000006
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 58.128
#=GS E9G324/209-316      AC E9G324
#=GS E9G324/209-316      OS Daphnia pulex
#=GS E9G324/209-316      DE Uncharacterized protein
#=GS E9G324/209-316      DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS A9V7W6/235-357      AC A9V7W6
#=GS A9V7W6/235-357      OS Monosiga brevicollis
#=GS A9V7W6/235-357      DE Predicted protein
#=GS A9V7W6/235-357      DR ORG; Eukaryota; Choanoflagellida; Salpingoecidae; Monosiga; Monosiga brevicollis; 
#=GS H2LNL3/196-320      AC H2LNL3
#=GS H2LNL3/196-320      OS Oryzias latipes
#=GS H2LNL3/196-320      DE Uncharacterized protein
#=GS H2LNL3/196-320      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS K7FDD3/264-385      AC K7FDD3
#=GS K7FDD3/264-385      OS Pelodiscus sinensis
#=GS K7FDD3/264-385      DE XPA binding protein 2
#=GS K7FDD3/264-385      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus; Pelodiscus sinensis; 
#=GS A0A0P7YFR5/189-308  AC A0A0P7YFR5
#=GS A0A0P7YFR5/189-308  OS Scleropages formosus
#=GS A0A0P7YFR5/189-308  DE Pre-mRNA-splicing factor SYF1-like
#=GS A0A0P7YFR5/189-308  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossiformes; Osteoglossidae; Scleropages; Scleropages formosus; 
#=GS G3P6H9/198-323      AC G3P6H9
#=GS G3P6H9/198-323      OS Gasterosteus aculeatus
#=GS G3P6H9/198-323      DE XPA binding protein 2
#=GS G3P6H9/198-323      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus; Gasterosteus aculeatus; 
#=GS A0A3Q1F7C6/201-320  AC A0A3Q1F7C6
#=GS A0A3Q1F7C6/201-320  OS Acanthochromis polyacanthus
#=GS A0A3Q1F7C6/201-320  DE Uncharacterized protein
#=GS A0A3Q1F7C6/201-320  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Pomacentridae; Acanthochromis; Acanthochromis polyacanthus; 
#=GS A0A3P8QKV3/196-318  AC A0A3P8QKV3
#=GS A0A3P8QKV3/196-318  OS Astatotilapia calliptera
#=GS A0A3P8QKV3/196-318  DE Uncharacterized protein
#=GS A0A3P8QKV3/196-318  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Cichlomorphae; Cichliformes; Cichlidae; Pseudocrenilabrinae; Haplochromini; Astatotilapia; Astatotilapia calliptera; 
#=GS A0A3Q3MEE1/168-287  AC A0A3Q3MEE1
#=GS A0A3Q3MEE1/168-287  OS Mastacembelus armatus
#=GS A0A3Q3MEE1/168-287  DE Uncharacterized protein
#=GS A0A3Q3MEE1/168-287  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Synbranchiformes; Mastacembeloidei; Mastacembelidae; Mastacembelus; Mastacembelus armatus; 
#=GS A0A3B4UWD8/200-320  AC A0A3B4UWD8
#=GS A0A3B4UWD8/200-320  OS Seriola dumerili
#=GS A0A3B4UWD8/200-320  DE Uncharacterized protein
#=GS A0A3B4UWD8/200-320  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Carangiformes; Carangidae; Seriola; Seriola dumerili; 
#=GS A0A3P8VTY4/200-319  AC A0A3P8VTY4
#=GS A0A3P8VTY4/200-319  OS Cynoglossus semilaevis
#=GS A0A3P8VTY4/200-319  DE Uncharacterized protein
#=GS A0A3P8VTY4/200-319  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus; Cynoglossus semilaevis; 
#=GS A0A3Q3GB84/196-317  AC A0A3Q3GB84
#=GS A0A3Q3GB84/196-317  OS Kryptolebias marmoratus
#=GS A0A3Q3GB84/196-317  DE Uncharacterized protein
#=GS A0A3Q3GB84/196-317  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Cyprinodontiformes; Aplocheiloidei; Rivulidae; Kryptolebias; Kryptolebias marmoratus; 
#=GS A0A3B4Z1Z2/200-319  AC A0A3B4Z1Z2
#=GS A0A3B4Z1Z2/200-319  OS Stegastes partitus
#=GS A0A3B4Z1Z2/200-319  DE Uncharacterized protein
#=GS A0A3B4Z1Z2/200-319  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Pomacentridae; Stegastes; Stegastes partitus; 
#=GS A0A0P5X2E6/207-315  AC A0A0P5X2E6
#=GS A0A0P5X2E6/207-315  OS Daphnia magna
#=GS A0A0P5X2E6/207-315  DE Pre-mRNA-splicing factor SYF1
#=GS A0A0P5X2E6/207-315  DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; 
#=GS A0A3B4WFB6/200-320  AC A0A3B4WFB6
#=GS A0A3B4WFB6/200-320  OS Seriola lalandi dorsalis
#=GS A0A3B4WFB6/200-320  DE Uncharacterized protein
#=GS A0A3B4WFB6/200-320  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Carangiformes; Carangidae; Seriola; Seriola lalandi; Seriola lalandi dorsalis; 
#=GS A0A3Q2X798/196-318  AC A0A3Q2X798
#=GS A0A3Q2X798/196-318  OS Haplochromis burtoni
#=GS A0A3Q2X798/196-318  DE Uncharacterized protein
#=GS A0A3Q2X798/196-318  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Cichlomorphae; Cichliformes; Cichlidae; Pseudocrenilabrinae; Haplochromini; Haplochromis; Haplochromis burtoni; 
#=GS A0A3B4GCB1/196-318  AC A0A3B4GCB1
#=GS A0A3B4GCB1/196-318  OS Pundamilia nyererei
#=GS A0A3B4GCB1/196-318  DE Uncharacterized protein
#=GS A0A3B4GCB1/196-318  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Cichlomorphae; Cichliformes; Cichlidae; Pseudocrenilabrinae; Haplochromini; Pundamilia; Pundamilia nyererei; 
#=GS A0A3P9CRK3/196-318  AC A0A3P9CRK3
#=GS A0A3P9CRK3/196-318  OS Maylandia zebra
#=GS A0A3P9CRK3/196-318  DE Uncharacterized protein
#=GS A0A3P9CRK3/196-318  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Cichlomorphae; Cichliformes; Cichlidae; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex; Maylandia zebra; 
#=GS A0A3P9JHR1/163-285  AC A0A3P9JHR1
#=GS A0A3P9JHR1/163-285  OS Oryzias latipes
#=GS A0A3P9JHR1/163-285  DE XPA binding protein 2
#=GS A0A3P9JHR1/163-285  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A0P5MXQ5/209-315  AC A0A0P5MXQ5
#=GS A0A0P5MXQ5/209-315  OS Daphnia magna
#=GS A0A0P5MXQ5/209-315  DE Pre-mRNA-splicing factor SYF1
#=GS A0A0P5MXQ5/209-315  DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; 
#=GF SQ 20
E9G324/209-316              -------------KTGKSNHQLWNELCELNSKNPKQIKSLNVDAIIRGGLRRYTDQLGQLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELNLNHMMEEIGQKTN------
A9V7W6/235-357              ILIEVLNKEKYVSKQGKSHHQLWLELCQLVSEHPDGVRNIKVEPIIRGGLRKFSDMIGQLWCALAAYHIRRGSFEKARDIYEEAIQTVQTVRDFSQVFEAYAEFEEQSLTALMEQMGEEGLDG----
H2LNL3/196-320              --AAIVNDENFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETNSEMGQDEEDDV
K7FDD3/264-385              -LAVIVNDERFVSKEGKSNYQLWHELCDLISQNPDKVKSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVMTVRDFTQVFDSYAQFEESMIAAKMETTSELGQEE----
A0A0P7YFR5/189-308          -------DESFVSKEGKSNYQLWHELCDLISQNPDKVKSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTSEMGQDDEDDI
G3P6H9/198-323              -LAAVVNDESFVSKEGKSNYQLWHELCDLISQNPDKVTSLKVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEMGKDEDEDI
A0A3Q1F7C6/201-320          -------DESFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEMGQDEDDDI
A0A3P8QKV3/196-318          --AAVVNDENFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEMGQDEDD--
A0A3Q3MEE1/168-287          -------DEGFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEMGQDEDDDI
A0A3B4UWD8/200-320          ------NDESFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEMGQDEDDDI
A0A3P8VTY4/200-319          ------NDENFVSKEGKSNYQLWHELCELISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDNYAQFEENMIASKMETTAELGQDEDDD-
A0A3Q3GB84/196-317          --AAIVNDESFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEMGQEEE---
A0A3B4Z1Z2/200-319          ------NDESFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEMGQDEDDD-
A0A0P5X2E6/207-315          -----------TSKTGKSNHQLWNELCELSSKNPKQIKSLNVDAIIRGGLRRYTDQLGQLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELNLSHLMEEIGEKT-------
A0A3B4WFB6/200-320          ------NDESFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEMGQDEDDDI
A0A3Q2X798/196-318          --AAVVNDENFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEMGQDEDD--
A0A3B4GCB1/196-318          --AAVVNDENFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEMGQDEDD--
A0A3P9CRK3/196-318          --AAVVNDENFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEMGQDEDD--
A0A3P9JHR1/163-285          --AAIVNDENFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETNSEMGQDEED--
A0A0P5MXQ5/209-315          -------------KTGKSNHQLWNELCELSSKNPKQIKSLNVDAIIRGGLRRYTDQLGQLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELNLSHLMEEIGEKT-------
#=GC scorecons              0010113342445959997799959996959679657577795799999958779779699679979899794997999799999599499999799985997999456554995558463432200
#=GC scorecons_70           _____________*_********_*****_*_***_*_****_*******_**********_**********_************_**_**********_******__*___**___*_*_______
#=GC scorecons_80           _____________*_****_***_***_*_*_**__*_****_*******_*******_**_**********_******_*****_**_**********_******______**___*_________
#=GC scorecons_90           _____________*_***__***_***_*_*__*_______*__******_*__*__*_**__**_****_*_**_***_*****_**_*****_****_**_***______**_____________
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