# STOCKHOLM 1.0
#=GF ID 1.25.40.40/FF/000003
#=GF DE Cytochrome c oxidase subunit 5A, mitochondrial
#=GF AC 1.25.40.40/FF/000003
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 22.201
#=GS Q94514/30-139      AC Q94514
#=GS Q94514/30-139      OS Drosophila melanogaster
#=GS Q94514/30-139      DE Cytochrome c oxidase subunit 5A, mitochondrial
#=GS Q94514/30-139      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q94514/30-139      DR GO; GO:0004129; GO:0005739; GO:0005751; GO:0006123; GO:0007406; GO:0045787; 
#=GS A0A0B4KFT0/30-139  AC A0A0B4KFT0
#=GS A0A0B4KFT0/30-139  OS Drosophila melanogaster
#=GS A0A0B4KFT0/30-139  DE Cytochrome c oxidase subunit 5A, isoform C
#=GS A0A0B4KFT0/30-139  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS B4KB45/30-139      AC B4KB45
#=GS B4KB45/30-139      OS Drosophila mojavensis
#=GS B4KB45/30-139      DE Uncharacterized protein
#=GS B4KB45/30-139      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS A0A023JNL9/30-139  AC A0A023JNL9
#=GS A0A023JNL9/30-139  OS Drosophila santomea
#=GS A0A023JNL9/30-139  DE Mitochondrial cytochrome c oxidase subunit Va
#=GS A0A023JNL9/30-139  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila santomea; 
#=GS Q6W757/30-139      AC Q6W757
#=GS Q6W757/30-139      OS Drosophila mauritiana
#=GS Q6W757/30-139      DE Cytochrome c oxidase polypeptide Va
#=GS Q6W757/30-139      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila mauritiana; 
#=GS B4PTF4/30-139      AC B4PTF4
#=GS B4PTF4/30-139      OS Drosophila yakuba
#=GS B4PTF4/30-139      DE Mitochondrial cytochrome c oxidase subunit Va
#=GS B4PTF4/30-139      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS Q6W758/30-139      AC Q6W758
#=GS Q6W758/30-139      OS Drosophila simulans
#=GS Q6W758/30-139      DE CoVa
#=GS Q6W758/30-139      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B4HHW6/30-139      AC B4HHW6
#=GS B4HHW6/30-139      OS Drosophila sechellia
#=GS B4HHW6/30-139      DE GM23980
#=GS B4HHW6/30-139      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B3MTT2/30-139      AC B3MTT2
#=GS B3MTT2/30-139      OS Drosophila ananassae
#=GS B3MTT2/30-139      DE Uncharacterized protein
#=GS B3MTT2/30-139      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B4GMB9/30-139      AC B4GMB9
#=GS B4GMB9/30-139      OS Drosophila persimilis
#=GS B4GMB9/30-139      DE GL12282
#=GS B4GMB9/30-139      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS Q295B6/30-139      AC Q295B6
#=GS Q295B6/30-139      OS Drosophila pseudoobscura pseudoobscura
#=GS Q295B6/30-139      DE Uncharacterized protein
#=GS Q295B6/30-139      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A3B0KPC9/30-139  AC A0A3B0KPC9
#=GS A0A3B0KPC9/30-139  OS Drosophila guanche
#=GS A0A3B0KPC9/30-139  DE Blast:Cytochrome c oxidase subunit 5A, mitochondrial
#=GS A0A3B0KPC9/30-139  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS B4NKL3/30-139      AC B4NKL3
#=GS B4NKL3/30-139      OS Drosophila willistoni
#=GS B4NKL3/30-139      DE Uncharacterized protein
#=GS B4NKL3/30-139      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS A0A1W4W184/30-139  AC A0A1W4W184
#=GS A0A1W4W184/30-139  OS Drosophila ficusphila
#=GS A0A1W4W184/30-139  DE cytochrome c oxidase subunit 5A, mitochondrial
#=GS A0A1W4W184/30-139  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A059NU14/30-139  AC A0A059NU14
#=GS A0A059NU14/30-139  OS Drosophila teissieri
#=GS A0A059NU14/30-139  DE Mitochondrial cytochrome c oxidase subunit Va
#=GS A0A059NU14/30-139  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila teissieri; 
#=GS B3P4E7/30-139      AC B3P4E7
#=GS B3P4E7/30-139      OS Drosophila erecta
#=GS B3P4E7/30-139      DE GG18466
#=GS B3P4E7/30-139      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GF SQ 16
Q94514/30-139              LHGTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKP
A0A0B4KFT0/30-139          LHGTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKP
B4KB45/30-139              LHGTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDVVPSPKIIESGLRACRRVNDIALAIRWLEGCKDKCGDHKATLYPYLLEKITPTLKELGVPTIEELGYDKP
A0A023JNL9/30-139          LHGTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKP
Q6W757/30-139              LHGTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKP
B4PTF4/30-139              LHGTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKP
Q6W758/30-139              LHGTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKP
B4HHW6/30-139              LHGTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKP
B3MTT2/30-139              LHGTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIVEAGLRAARRVNDIALAIRWLEGCKYKCGDQMATLYPYILEKVTPTLKELGVPTLEELGYDKP
B4GMB9/30-139              LHGSEESAEDFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKVIEAGLRGARRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLKELGIPTIEELGYDKP
Q295B6/30-139              LHGSEESAEDFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKVIEAGLRGARRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLKELGIPTIEELGYDKP
A0A3B0KPC9/30-139          LHGSEESAEDFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRGARRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLKELGIPTIEELGYDQP
B4NKL3/30-139              LHGAEESAEEFDKRYEKYFSREGIDGWEVRKGMNDLLGMDLVPSPSIIEAGLRASRRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLNELGIPTIEELGYDKP
A0A1W4W184/30-139          AHGAEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKVIEAGLRATRRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTLEELGYDKP
A0A059NU14/30-139          LHGTEESAEEFDKRYEKYFSRDGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKP
B3P4E7/30-139              LHGTEESAEEFDKRYEKYFSRDGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKP
#=GC scorecons             79959999979999999999989999998999999999998999977897999659999999999999999979999879999997999899995999799799999989
#=GC scorecons_70          ***_**************************************************_***************************************_***************
#=GC scorecons_80          ***_*************************************************__***************************************_***************
#=GC scorecons_90          _**_*****_***********************************__**_***__*****************_*****_******_********_***_**_********
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