# STOCKHOLM 1.0
#=GF ID 1.25.40.280/FF/000008
#=GF DE Unplaced genomic scaffold supercont1.16, whole genome shotgun sequence
#=GF AC 1.25.40.280/FF/000008
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 14.054
#=GS P0CM48/4-279_310-457      AC P0CM48
#=GS P0CM48/4-279_310-457      OS Cryptococcus neoformans var. neoformans JEC21
#=GS P0CM48/4-279_310-457      DE pH-response regulator protein palC
#=GS P0CM48/4-279_310-457      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A0D0USL1/4-279_310-456  AC A0A0D0USL1
#=GS A0A0D0USL1/4-279_310-456  OS Cryptococcus gattii VGII Ram5
#=GS A0A0D0USL1/4-279_310-456  DE Unplaced genomic scaffold supercont1.16, whole genome shotgun sequence
#=GS A0A0D0USL1/4-279_310-456  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; 
#=GS A0A0D0WYX3/5-279_310-456  AC A0A0D0WYX3
#=GS A0A0D0WYX3/5-279_310-456  OS Cryptococcus gattii EJB2
#=GS A0A0D0WYX3/5-279_310-456  DE Unplaced genomic scaffold supercont1.168, whole genome shotgun sequence
#=GS A0A0D0WYX3/5-279_310-456  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS A0A0D0THS5/4-279_310-456  AC A0A0D0THS5
#=GS A0A0D0THS5/4-279_310-456  OS Cryptococcus gattii CA1280
#=GS A0A0D0THS5/4-279_310-456  DE Unplaced genomic scaffold supercont1.13, whole genome shotgun sequence
#=GS A0A0D0THS5/4-279_310-456  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIII; 
#=GS A0A0D0YTY9/4-279_310-455  AC A0A0D0YTY9
#=GS A0A0D0YTY9/4-279_310-455  OS Cryptococcus gattii VGIV IND107
#=GS A0A0D0YTY9/4-279_310-455  DE Unplaced genomic scaffold supercont2.13, whole genome shotgun sequence
#=GS A0A0D0YTY9/4-279_310-455  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIV; 
#=GS J9VV80/4-279_310-457      AC J9VV80
#=GS J9VV80/4-279_310-457      OS Cryptococcus neoformans var. grubii H99
#=GS J9VV80/4-279_310-457      DE pH-response regulator protein palC
#=GS J9VV80/4-279_310-457      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS P0CM49/4-279_310-457      AC P0CM49
#=GS P0CM49/4-279_310-457      OS Cryptococcus neoformans var. neoformans B-3501A
#=GS P0CM49/4-279_310-457      DE pH-response regulator protein palC
#=GS P0CM49/4-279_310-457      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A095CJI5/4-279_310-456  AC A0A095CJI5
#=GS A0A095CJI5/4-279_310-456  OS Cryptococcus gattii VGII R265
#=GS A0A095CJI5/4-279_310-456  DE pH-response regulator protein palC
#=GS A0A095CJI5/4-279_310-456  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; 
#=GS E6R781/5-279_310-456      AC E6R781
#=GS E6R781/5-279_310-456      OS Cryptococcus gattii WM276
#=GS E6R781/5-279_310-456      DE Uncharacterized protein
#=GS E6R781/5-279_310-456      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS A0A225YLD3/4-279_310-457  AC A0A225YLD3
#=GS A0A225YLD3/4-279_310-457  OS Cryptococcus neoformans var. grubii c45
#=GS A0A225YLD3/4-279_310-457  DE pH-response regulator protein palC
#=GS A0A225YLD3/4-279_310-457  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS A0A226BEQ3/4-279_310-457  AC A0A226BEQ3
#=GS A0A226BEQ3/4-279_310-457  OS Cryptococcus neoformans var. grubii Bt85
#=GS A0A226BEQ3/4-279_310-457  DE pH-response regulator protein palC
#=GS A0A226BEQ3/4-279_310-457  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GF SQ 11
P0CM48/4-279_310-457              YLYRLPTTSLITFSAILNDPSSSYTTILSDATASRTKLHLALKGIADNEPGASALAVLDAVQIYLPYLKGIIACLDADELLFKGEPTFQWRAPLTHFSFSSPLLPLASIHSEHLMVVLTYALALSNYAHSILASLPAFEIPAGPKAMPHMSSEDEKRTTAGLARAVDLLCQASGVAEWAAENVCLQVEPLKGVSSGRLGKGKWPAESSRETFKALSMILLADAHLTAIRKLLFPVLTYTLFAPPGPPLPPNHPSAPLQAKLYLYVHQLYSSARALLEAVEGEIIPELKRYLAKEAQLALALAHKWLGIDAGENGKGAKVGEALAWVKDAQGRLEDLEDSKMRAKLKGLSIGKSRERKKEERRARMGRVERELEVVKAWVKAYQKMNDTVAFQPVPPVSSLVTPSGRPIFGPKAFIPPPSKFSPS
A0A0D0USL1/4-279_310-456          YLYPLPTTSLITFSAILTDPSSSYTTILSEATAARTKLHLTLKGIADNEPGASALAVLDAVQIYLPYLKGIIACLDADELLFKSEPTFQWRAPLTHFALSSPLLPLLSIHSEHLMVILTYTLALSNYAHSILSSLPAFEIPAGSKNMPHMSSEDEKRTTAGLARAVDLLCQASGVAEWAAENVCLQVESLKSVSSGRLGKGKWPAESSRETFRALSMILLADAHLTAIRKLLLPVLTYTLFAPPGPPLPPNHPSAPLQAKLYLHVHQLYSSARALLEPVEGEITPELKRYLAKEAQLALALAHKWLGIDAGENGRGTKVGEALAWVKDAQDRLEDLEDSKMRTKLKGLSLGKSRERKKEERRARMGRVERELEVVKAWVKAYQMMNDTVAFQPVPPVSSLVTPAGRPIFGAKAFIPPPSKFAP-
A0A0D0WYX3/5-279_310-456          -LYSLPTTSLITFSAILTDPSSSYTTILSEATAARTKLHLTLKGIADNEPGASALAVLDAVQIYLPYLKGIIACLDADELLFKSEPTFQWRAPLTHFSLSTPLLPLLSIHSEHLMVILTYTLALSNYAHSILSSLPAFEIPAGSKNMPHMSSEDEKRTTAGLARAVDLLCQASGVAEWAAENVCLQVESLKSVSSGRLGKGRWPAESSRETFRALSMILLADAHLTAIRKLLLPVLTYTLFAPPGPPLPPNHPSAPLQAKLYLYVHQLYSSARALLEAVEGEITPELKRYLAKEARLALALAHKWLGIDAGENGKGTKVGEALAWVKDAQDRLEDLEDSKMRTKLKGLSLGKCRERKKEERKMRMGRVERELEVVKAWVKAYQMMNDTVAFQPVPPVSSLVTPAGRPIFGAKAFIPPPSKFAP-
A0A0D0THS5/4-279_310-456          YLYPLPTTSLITFSAILTDPSSSYTTILSEATAARTKLHLTLKGIADNEPGASALAVLDAVQIYLPYLKGIIACLDADELLFKSEPTFQWRAPLTHFGLSSPLLPLLSIHSEHLMVTLTYTLALSNYAHSILSSLPAFEIPAGSKNMPHMSSEDEKRTTAGLARAVDLLCQASGVAEWAAENVCLQVESLKSVSSGRLGKGKWPAESSRETFRALSMILLADAHLTAIRKLLLPVLTYTLFAPPGPPLPPNHPSAPLQAKLYLHVHQLYSSARALLEAVEGEITLELKRYLAKEAQLALALAHKWLGIDAGENGKGTKVGEALAWVKDAQDRLEDLEDSKMRTKLKGLSLGKSRERKREERKVRMGRVERELEVVKAWVKAYQMMNDTVAFQPVPPVSSLVTPAGRPIFGAKEFIPPPSKFAP-
A0A0D0YTY9/4-279_310-455          YLYPLPTTSLITFSAILTDPSSSYTTILSEATAARTKLHLTLKGIADNEPGASALAVLDAVQIYLPYLKGIIACLDADELLFKSEPTFQWRAPLTHFGLSWPLLPLLSIHSEHLMVILTYTLALSNYAHSILSSLPAFEIPAGSKNMPHMSSEDEKRTTAGLARAVDLLCQASGVAEWAAEHVCLQVESLKSVSSGRLGKGKWPAESSRETFRALSMILLADAHLTAIRKLLLPVLTYTLFAPPGPPLPPNHPSAPLQAKLYLHVHQLYSSARALLEPVEGEITPELKRYLAKEAQLALALAHKWLGIDAGENGRGTKVGEALAWVKDAQDRLEDLEDSKMRTKLKGLSLGKSRERKKEERKVRMGRVERELEVVKAWVKAYQMMNDTVAFQPVPPVSSLVTPAGRPIFGAKAFIPPPSKFA--
J9VV80/4-279_310-457              YLYPLPTTSLITFSAILNDPSSSYTTILSDATTARTKLHLALKGVANNEPGASALAVLDAVQIYLPYLKGIIACLDADELLFRSEPTFQWRAPLTHFSLSSPLLPLVSIHSEHLMIVLTYTLALSNYAHSILASLPAFEIPAGSKTMPHMSSEDEKRTTAGLTRAVDLLCQASGVAEWAAENVCLQVEPVKGVSSGRLGKGKWPAESSRETFKALSMILLADAHLTAIRKLLLPVLTYTLFAPPGPPLPPNHPSAPLQAKLYLHVHQLYSSARALLEAVEGEIIPELKRYLAKEAQLALALAHKWLGIDAGENGKGTKVGEALAWVKDAQGRLEDLEDSKMRAKLKGLSLGKSRERKKEERRARMGRVERELEVVKAWVKAYQKMNDTVAFQPVPPISSLVTPSGRPIFGSKAFIPPPSKFSPS
P0CM49/4-279_310-457              YLYRLPTTSLITFSAILNDPSSSYTTILSDATASRTKLHLALKGIADNEPGASALAVLDAVQIYLPYLKGIIACLDADELLFKGEPTFQWRAPLTHFSFSSPLLPLASIHSEHLMVVLTYALALSNYAHSILASLPAFEIPAGPKAMPHMSSEDEKRTTAGLARAVDLLCQASGVAEWAAENVCLQVEPLKGVSSGRLGKGKWPAESSRETFKALSMILLADAHLTAIRKLLFPVLTYTLFAPPGPPLPPNHPSAPLQAKLYLYVHQLYSSARALLEAVEGEIIPELKRYLAKEAQLALALAHKWLGIDAGENGKGAKVGEALAWVKDAQGRLEDLEDSKMRAKLKGLSIGKSRERKKEERRARMGRVERELEVVKAWVKAYQKMNDTVAFQPVPPVSSLVTPSGRPIFGPKAFIPPPSKFSPS
A0A095CJI5/4-279_310-456          YLYPLPTTSLITFSAILTDPSSSYTTILSEATAARTKLHLTLKGIADNEPGASALAVLDAVQIYLPYLKGIIACLDADELLFKSEPTFQWRAPLTHFALSSPLLPLLSIHSEHLMVILTYTLALSNYAHSILSSLPAFEIPAGSKNMPHMSSEDEKRTTAGLARAVDLLCQASGVAEWAAENVCLQVESLKSVSSGRLGKGKWPAESSRETFRALSMILLADAHLTAIRKLLLPVLTYTLFAPPGPPLPPNHPSAPLQAKLYLHVHQLYSSARALLEPVEGEITPELKRYLAKEAQLALALAHKWLGIDAGENGRGTKVGEALAWVKDAQDRLEDLEDSKMRTKLKGLSLGKSRERKKEERRARMGRVERELEVVKAWVKAYQMMNDTVAFQPVPPVSSLVTPAGRPIFGAKAFIPPPSKFAP-
E6R781/5-279_310-456              -LYSLPTTSLITFSAILTDPSSSYTTILSEATAARTKLHLTLKGIADNEPGASALAVLDAVQIYLPYLKGIIACLDADELLFKSEPTFQWRAPLTHFSLSTPLLPLLSIHSEHLMVILTYTLALSNYAHSILSSLPAFEIPAGSKNMPHMSSEDEKRTTAGLARAVDLLCQASGVAEWAAENVCLQVESLKSVSSGRLGKGRWPAESSRETFRALSMILLADAHLTAIRKLLLPVLTYTLFAPPGPPLPPNHPSAPLQAKLYLYVHQLYSSARALLEAVEGEITPELKRYLAKEARLALALAHKWLGIDAGENGKGTKVGEALAWVKDAQDRLEDLEDSKMRTKLKGLSLGKCRERKKEERKMRMGRVERELEVVKAWVKAYQMMNDTVAFQPVPPVSSLVTPAGRPIFGAKAFIPPPSKFAP-
A0A225YLD3/4-279_310-457          YLYPLPTTSLITFSAILNDPSSSYTTILSDATAARTKLHLALKGVADNEPGASALAVLDAVQIYLPYLKGIIACLDADELLFKSEPTFQWRAPLTHFSLSSPLLPLVSIHSEHLMIVLTYTLALSNYAHSILASLPAFEIPAGSKTMPHMSSEDEKRTTAGLTRAVDLLCQASGVAEWAAENVCLQVEPVKGVSSGRLGKGKWPAESSRETFKALSMILLADAHLTAIRKLLLPVLTYTLFAPPGPPLPPNHPSAPLQAKLYLHVHQLYSSARALLEAVEGEIIPELKRYLAKEAQLALALAHKWLGIDAGENGKGTKVGEALAWVKDAQSRLEDLEDSKMRAKLKGLSLGKSRERKKEERRARMGRVERELEVVKAWVKAYQKMNDTVAFQPVPPVSSLVTPSGRPIFGPKAFIPPPSKFSPS
A0A226BEQ3/4-279_310-457          YLYPLPTTSLITFSAILNDPSSSHTTILSDATAARTKLHLALKGVADNEPEASALAVLDAVQIYLPYLKGIIACLDADELLFKGEPIFQWRAPLTHFSLSSPLLPLVSIHSEHLMVVLTYTLALSNYAHSILVSLPAFEIPAGSKTMPHMSSEDEKRTTAGLTRAVDLLCQASGVAGWAAENVCLQVEPVKGVSSGRLGKGKWPAESSRETFKALSMILLADAHLTAIRKLLLPVLTYTLFAPPGPPLPPNHPSAPLQAKLYLHVHQLYSSARALLEAVEGEIIPELKRYLAKEAQLALALAHKWLGIDAGENGKGTKVGEALAWVKDAQSRLEDLEDSKMRAKLKGLSLGKSRERKKEERRARTGRVERELEVVKAWVKAYQKMNDTVAFQPVPPVSSLVTPSGRPIFGPKAFIPPPSKFSPS
#=GC scorecons                    5995999999999999969999989999979987999999699979899979999999999999999999999999999999869979999999999679699999599999999769997999999999995999999999979599999999999999996999999999999979999899999966969999999997999999999979999999999999999999799999999999999999999999999999979999999999999699999679999999999799999999999999999979799999999999995999999999996999999799799998999759799999999999999999959999999999998999999699999959799999999671
#=GC scorecons_70                 _**_*************_*******************************************************************************_**_*****_*************************_************_******************************************_**_*******************************************************************************************_**********************************************_*******************************_********************_*******************_******_**********_*_
#=GC scorecons_80                 _**_*************_***********_***_******_******************************************_*************_**_*****_*********_***************_**********_*_****************_*************************__*_********************_**************************************************_*************_*****_**********************************************_***********_******************__********************_*******************_******_**********_*_
#=GC scorecons_90                 _**_*************_***********_**__******_***_*_***_********************************_**_**********__*_*****_********__***_***********_**********_*_****************_*************_****_******__*_*********_**********_*******************_******************************_*************_*****__**********_******************_*_*************_***********_******_**_********__*_******************_*******************_******_*_********___
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