# STOCKHOLM 1.0 #=GF ID 1.25.40.20/FF/000251 #=GF DE Protein LHCP TRANSLOCATION DEFECT #=GF AC 1.25.40.20/FF/000251 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 75.842 #=GS Q8VY88/99-174 AC Q8VY88 #=GS Q8VY88/99-174 OS Arabidopsis thaliana #=GS Q8VY88/99-174 DE Protein LHCP TRANSLOCATION DEFECT #=GS Q8VY88/99-174 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q8VY88/99-174 DR GO; GO:0005515; GO:0006886; GO:0009507; GO:0009570; GO:0009941; GO:0080167; GO:0090391; #=GS A0A178W808/99-174 AC A0A178W808 #=GS A0A178W808/99-174 OS Arabidopsis thaliana #=GS A0A178W808/99-174 DE LTD #=GS A0A178W808/99-174 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A8IYJ6/70-165 AC A8IYJ6 #=GS A8IYJ6/70-165 OS Chlamydomonas reinhardtii #=GS A8IYJ6/70-165 DE Predicted protein #=GS A8IYJ6/70-165 DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; #=GS A0A0P0X6M7/78-161 AC A0A0P0X6M7 #=GS A0A0P0X6M7/78-161 OS Oryza sativa Japonica Group #=GS A0A0P0X6M7/78-161 DE Os07g0520800 protein #=GS A0A0P0X6M7/78-161 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A3BKF2/85-168 AC A3BKF2 #=GS A3BKF2/85-168 OS Oryza sativa Japonica Group #=GS A3BKF2/85-168 DE Protein LHCP TRANSLOCATION DEFECT #=GS A3BKF2/85-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A438ISS7/94-172 AC A0A438ISS7 #=GS A0A438ISS7/94-172 OS Vitis vinifera #=GS A0A438ISS7/94-172 DE Protein LHCP translocation defect #=GS A0A438ISS7/94-172 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS D7T0C7/94-172 AC D7T0C7 #=GS D7T0C7/94-172 OS Vitis vinifera #=GS D7T0C7/94-172 DE Uncharacterized protein #=GS D7T0C7/94-172 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS I1JFS5/87-178 AC I1JFS5 #=GS I1JFS5/87-178 OS Glycine max #=GS I1JFS5/87-178 DE Uncharacterized protein #=GS I1JFS5/87-178 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A218X9R6/79-173 AC A0A218X9R6 #=GS A0A218X9R6/79-173 OS Punica granatum #=GS A0A218X9R6/79-173 DE Uncharacterized protein #=GS A0A218X9R6/79-173 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Myrtales; Lythraceae; Punica; Punica granatum; #=GS A0A067EGF1/95-172 AC A0A067EGF1 #=GS A0A067EGF1/95-172 OS Citrus sinensis #=GS A0A067EGF1/95-172 DE Uncharacterized protein #=GS A0A067EGF1/95-172 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Sapindales; Rutaceae; Aurantioideae; Citrus; Citrus sinensis; #=GS V4JY07/99-176 AC V4JY07 #=GS V4JY07/99-176 OS Eutrema salsugineum #=GS V4JY07/99-176 DE Uncharacterized protein #=GS V4JY07/99-176 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS A0A078GKS4/99-175 AC A0A078GKS4 #=GS A0A078GKS4/99-175 OS Brassica napus #=GS A0A078GKS4/99-175 DE BnaC06g04130D protein #=GS A0A078GKS4/99-175 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A199UR60/88-180 AC A0A199UR60 #=GS A0A199UR60/88-180 OS Ananas comosus #=GS A0A199UR60/88-180 DE Protein LHCP TRANSLOCATION DEFECT #=GS A0A199UR60/88-180 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Bromeliaceae; Bromelioideae; Ananas; Ananas comosus; #=GS I1GTX1/76-166 AC I1GTX1 #=GS I1GTX1/76-166 OS Brachypodium distachyon #=GS I1GTX1/76-166 DE Uncharacterized protein #=GS I1GTX1/76-166 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS B6TVT9/90-185 AC B6TVT9 #=GS B6TVT9/90-185 OS Zea mays #=GS B6TVT9/90-185 DE Protein LHCP TRANSLOCATION DEFECT #=GS B6TVT9/90-185 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A2H5PIR5/95-172 AC A0A2H5PIR5 #=GS A0A2H5PIR5/95-172 OS Citrus unshiu #=GS A0A2H5PIR5/95-172 DE Uncharacterized protein #=GS A0A2H5PIR5/95-172 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Sapindales; Rutaceae; Aurantioideae; Citrus; Citrus unshiu; #=GS V4TY14/95-172 AC V4TY14 #=GS V4TY14/95-172 OS Citrus clementina #=GS V4TY14/95-172 DE Uncharacterized protein #=GS V4TY14/95-172 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Sapindales; Rutaceae; Aurantioideae; Citrus; Citrus clementina; #=GS M4DQT3/99-175 AC M4DQT3 #=GS M4DQT3/99-175 OS Brassica rapa subsp. pekinensis #=GS M4DQT3/99-175 DE Uncharacterized protein #=GS M4DQT3/99-175 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A2T7EWS0/90-184 AC A0A2T7EWS0 #=GS A0A2T7EWS0/90-184 OS Panicum hallii var. hallii #=GS A0A2T7EWS0/90-184 DE Uncharacterized protein #=GS A0A2T7EWS0/90-184 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; Panicum hallii var. hallii; #=GS A0A3P5YV81/99-175 AC A0A3P5YV81 #=GS A0A3P5YV81/99-175 OS Brassica rapa #=GS A0A3P5YV81/99-175 DE Uncharacterized protein #=GS A0A3P5YV81/99-175 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; #=GS A0A445JMR1/87-178 AC A0A445JMR1 #=GS A0A445JMR1/87-178 OS Glycine soja #=GS A0A445JMR1/87-178 DE Protein LHCP TRANSLOCATION DEFECT #=GS A0A445JMR1/87-178 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; #=GS A0A368Q5Y9/90-185 AC A0A368Q5Y9 #=GS A0A368Q5Y9/90-185 OS Setaria italica #=GS A0A368Q5Y9/90-185 DE Uncharacterized protein #=GS A0A368Q5Y9/90-185 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Cenchrinae; Setaria; Setaria italica; #=GS J3MLE3/49-141 AC J3MLE3 #=GS J3MLE3/49-141 OS Oryza brachyantha #=GS J3MLE3/49-141 DE Uncharacterized protein #=GS J3MLE3/49-141 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza brachyantha; #=GS A0A0E0EC60/88-170 AC A0A0E0EC60 #=GS A0A0E0EC60/88-170 OS Oryza meridionalis #=GS A0A0E0EC60/88-170 DE Uncharacterized protein #=GS A0A0E0EC60/88-170 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS A0A0E0LLD8/95-177 AC A0A0E0LLD8 #=GS A0A0E0LLD8/95-177 OS Oryza punctata #=GS A0A0E0LLD8/95-177 DE Uncharacterized protein #=GS A0A0E0LLD8/95-177 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; #=GS A0A0E0AKN3/85-168 AC A0A0E0AKN3 #=GS A0A0E0AKN3/85-168 OS Oryza glumipatula #=GS A0A0E0AKN3/85-168 DE Uncharacterized protein #=GS A0A0E0AKN3/85-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0D3GRP8/82-165 AC A0A0D3GRP8 #=GS A0A0D3GRP8/82-165 OS Oryza barthii #=GS A0A0D3GRP8/82-165 DE Uncharacterized protein #=GS A0A0D3GRP8/82-165 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS I1QB69/82-165 AC I1QB69 #=GS I1QB69/82-165 OS Oryza glaberrima #=GS I1QB69/82-165 DE Uncharacterized protein #=GS I1QB69/82-165 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; #=GS A0A2S3H2U1/90-184 AC A0A2S3H2U1 #=GS A0A2S3H2U1/90-184 OS Panicum hallii #=GS A0A2S3H2U1/90-184 DE Uncharacterized protein #=GS A0A2S3H2U1/90-184 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; #=GS A0A0Q3GZW7/153-243 AC A0A0Q3GZW7 #=GS A0A0Q3GZW7/153-243 OS Brachypodium distachyon #=GS A0A0Q3GZW7/153-243 DE Uncharacterized protein #=GS A0A0Q3GZW7/153-243 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A2YLX7/85-168 AC A2YLX7 #=GS A2YLX7/85-168 OS Oryza sativa Indica Group #=GS A2YLX7/85-168 DE Protein LHCP TRANSLOCATION DEFECT #=GS A2YLX7/85-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GF SQ 31 Q8VY88/99-174 ---------------------AVEGTYSKMEALLNLNIHPVDILLMLAATEGDRPKIEELLKAGADYSVKDADGRTAIDRANSEEIRDLILGYSTQK--- A0A178W808/99-174 ---------------------AVEGTYSKMEALLNLNIHPVDILLMLAATEGDRPKIEELLKAGADYSVKDADGRTAIDRANSEEIRDLILGYSTQK--- A8IYJ6/70-165 ----EYTYDDVEQYFNYMGFLATEGTYDRMEAMLNSGLHPIDVILLLACSENDTPKVQEILKAGADPTVKGIDGKQPLELAAKPELIRMINEALASKSGV A0A0P0X6M7/78-161 ----------VEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDILLMLAASEGDKPKLEELLRAGAKYDVKDVDGRTALDRAA-DDTREFILGFAA----- A3BKF2/85-168 ----------VEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDILLMLAASEGDKPKLEELLRAGAKYDVKDVDGRTALDRAA-DDTREFILGFAA----- A0A438ISS7/94-172 -------------------MLAVEGTYDKMEALLSQNIHPVDILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEIKDLILNFSTQKA-- D7T0C7/94-172 -------------------MLAVEGTYDKMEALLSQNIHPVDILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEIKDLILNFSTQKA-- I1JFS5/87-178 --RDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDADGRTALDRAA-DEIKDFILNFSV----- A0A218X9R6/79-173 QSRDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLSQNIHPVDILLLMAASEGDKPKIEELLRAGAKYDVKDADGRTAIDRAADDEVRDLILGFSA----- A0A067EGF1/95-172 -------------------MLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPSEEIKDLILNFSVQK--- V4JY07/99-176 --------------------LAVEGTYSKMEALLNLKIHPVDILLMLAATEGDRPKIEELLRAGADYSVQDADGRTALDRANSQEIRDLILNYSAQKA-- A0A078GKS4/99-175 --------------------LAVEGTYSKMEALLNLNIHPVDILLMLAATEGDKPKIEELLRAGASYSVKDADGRTALDRANSEEIRDLILGYSTQK--- A0A199UR60/88-180 QSRDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLNQNIHPVDILLMLAASEGDKPKIEELLRAGAKYDVKDADGRTALDRVANDEIKELILGF------- I1GTX1/76-166 QARDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQGTHPVDILLLLAASEGDVPKIEELLRAGAKCDVKDPDERTALDRATSEEVRDLIA--------- B6TVT9/90-185 QARDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDILLMLAASEGDRPKIEELLRAGARFDVKDVDGRTALDRAT-DETREFILGFAAKK--- A0A2H5PIR5/95-172 -------------------MLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPSEEIKDLILNFSVQK--- V4TY14/95-172 -------------------MLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPSEEIKDLILNFSVQK--- M4DQT3/99-175 --------------------LAVEGTYSKMEALLNLNIHPVDILLMLAATEGDKPKIEELLRAGASYSVKDADGRTALDRANSEEIRDLILGYSTQK--- A0A2T7EWS0/90-184 QARDDFDRDDVEQYYNYMGMLAVEGTYDKMEALLNQDIHPVDILLMLAASEGDRPKIEELLRAGAKYDVKDVDGRTALDRAS-DETREFILGFAVK---- A0A3P5YV81/99-175 --------------------LAVEGTYSKMEALLNLNIHPVDILLMLAATEGDKPKIEELLRAGASYSVKDADGRTALDRANSEEIRDLILGYSTQK--- A0A445JMR1/87-178 --RDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDADGRTALDRAA-DEIKDFILNFSV----- A0A368Q5Y9/90-185 QARDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDILLMLAASEGDRPKIEELLRAGAKYDVKDVDGRTALDRAS-DETREFILGFAAKK--- J3MLE3/49-141 --RDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDILLMLAASEGDKPKIEELLRAGAKYDVKDVDGRTALDRAS-DDTRDFILGFAKT---- A0A0E0EC60/88-170 -----------EQYFNYMGMLAVEGTYDKMEALLNQDIHPVDILLMLAASEGDKPKLEELLRAGAKYDVKDVDGRTALDRAA-DDTREFILGFAA----- A0A0E0LLD8/95-177 -----------EQYFNYMGMLAVEGTYDKMEALLNQDIHPVDILLMLAASEGDKPKLEELLRAGAKYDVKDVDGRTALDRAA-DDTREFILGFAA----- A0A0E0AKN3/85-168 ----------VEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDILLMLAASEGDKPKLEELLRAGAKYDVKDVDGRTALDRAA-DDTREFILGFAA----- A0A0D3GRP8/82-165 ----------VEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDILLMLAASEGDKPKLEELLRAGAKYDVKDVDGRTALDRAA-DDTREFILGFAA----- I1QB69/82-165 ----------VEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDILLMLAASEGDKPKLEELLRAGAKYDVKDVDGRTALDRAA-DDTREFILGFAA----- A0A2S3H2U1/90-184 QARDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDILLMLAASEGDRPKIEELLRAGAKYDVKDVDGRTALDRAS-DETREFILGFAVK---- A0A0Q3GZW7/153-243 QARDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQGTHPVDILLLLAASEGDVPKIEELLRAGAKCDVKDPDERTALDRATSEEVRDLIA--------- A2YLX7/85-168 ----------VEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDILLMLAASEGDKPKLEELLRAGAKYDVKDVDGRTALDRAA-DDTREFILGFAA----- #=GC scorecons 0011111111233333333479899896899989655799898897898798959978989899957598859888887884167566697554412000 #=GC scorecons_70 ____________________***************__****************_***********_*_***_*********__**_**_**_________ #=GC scorecons_80 ____________________*******_******___************_***_**_********_*_***_*********___*____*__________ #=GC scorecons_90 _____________________******_******____*******_***_***_**_********___***_*****___*________*__________ //