# STOCKHOLM 1.0
#=GF ID 1.25.40.180/FF/000094
#=GF DE Nonsense-mediated mRNA decay protein 2
#=GF AC 1.25.40.180/FF/000094
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 2.508
#=GS P38798/574-815      AC P38798
#=GS P38798/574-815      OS Saccharomyces cerevisiae S288C
#=GS P38798/574-815      DE Nonsense-mediated mRNA decay protein 2
#=GS P38798/574-815      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P38798/574-815      DR GO; GO:0000184; GO:0005515; GO:0005737; GO:0005844; GO:0006310; GO:0070478; 
#=GS A0A0L8VP94/574-815  AC A0A0L8VP94
#=GS A0A0L8VP94/574-815  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VP94/574-815  DE NMD2p Protein involved in the nonsense-mediated mRNA decay (NMD) pathway
#=GS A0A0L8VP94/574-815  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS N1P4K0/576-817      AC N1P4K0
#=GS N1P4K0/576-817      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P4K0/576-817      DE Nmd2p
#=GS N1P4K0/576-817      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LSJ5/574-815      AC B3LSJ5
#=GS B3LSJ5/574-815      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LSJ5/574-815      DE Nonsense-mediated mRNA decay protein 2
#=GS B3LSJ5/574-815      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WFF0/574-815      AC G2WFF0
#=GS G2WFF0/574-815      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WFF0/574-815      DE K7_Nmd2p
#=GS G2WFF0/574-815      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8Z9M0/578-815      AC C8Z9M0
#=GS C8Z9M0/578-815      OS Saccharomyces cerevisiae EC1118
#=GS C8Z9M0/578-815      DE Nmd2p
#=GS C8Z9M0/578-815      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZSY4/578-815      AC A6ZSY4
#=GS A6ZSY4/578-815      OS Saccharomyces cerevisiae YJM789
#=GS A6ZSY4/578-815      DE Protein involved in the nonsense-mediated mRNA decay (NMD) pathway
#=GS A6ZSY4/578-815      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF SQ 7
P38798/574-815              TPEQQFYRILIRSELSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFVIRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGHINNQPNPFYLNYSDPPDNYFRIQLVTTILLNINRTPAAFTKKCKLLLRFFEYYTFIKEQPLPKETEFRVSSTFKKYENIFGNTKFERSENLVESASRLESLLKSLNAIK
A0A0L8VP94/574-815          TPEQQFYRILIRSELSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFVIRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGHINNQPNPFYLNDSDPPDNYFRIQLVTTILLNINRTPAAFTKKCKLLLRFFEYYTFIKEQPLPKETEFRVSSTFKKYENIFGNTKFERSENLVESASRLESLLKSLNAIK
N1P4K0/576-817              TPEQQFYRILIRSELSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFVIRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGHINNQPNPFYLNYSDPPDNYFRIQLVTTILLNINRTPAAFTKKCKLLLRFFEYYTFIKEQPLPKETEFRVSSTFKKYENIFGNTKFERSENLVESASRLESLLKSLNAIK
B3LSJ5/574-815              TPEQQFYRILIRSELSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFVIRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGHINNQPNPFYLNDSDPPDNYFRIQLVTTILLNINRTPAAFTKKCKLLLRFFEYYTFIKEQPLPKETEFRVSSTFKKYENIFGNTKFERSENLVESASRLESLLKSLNAIK
G2WFF0/574-815              TPEQQFYRILIRSELSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFVIRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGHINNQPNPFYLNDSDPPDNYFRIQLVTTILLNINRTPAAFTKKCKLLLRFFEYYTFIKEQPLPKETEFRVSSTFKKYENIFGNTKFERSENLVESASRLESLLKSLNAIK
C8Z9M0/578-815              ----QFYRILIRSELSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFVIRCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGHINNQPNPFYLNDSDPPDNYFRIQLVTTILLNINRTPAAFTKKCKLLLRFFEYYTFIKEQPLPKETEFRVSSTFKKYENIFGNTKFERSENLVESASRLESLLKSLNAIK
A6ZSY4/578-815              ----QFYRILIRSELSSLDFKHIVKLVRKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFVIKCIDQVLENIERGLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGHINNQPNPFYLNDSDPPDNYFRIQLVTTILLNINRTPAAFTKKCKLLLRFFEYYTFIKEQPLPKETEFRVSSTFKKYENIFGNTKFERSENLVESASRLESLLKSLNAIK
#=GC scorecons              22229999999999999999999999999999999999999999999999999999999999999999999999979999999999999999999999999999999999999999999999999999999999999999999959999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999
#=GC scorecons_70           ____********************************************************************************************************************************************_*************************************************************************************************
#=GC scorecons_80           ____********************************************************************************************************************************************_*************************************************************************************************
#=GC scorecons_90           ____***********************************************************************_********************************************************************_*************************************************************************************************
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