# STOCKHOLM 1.0
#=GF ID 1.25.40.180/FF/000062
#=GF DE CCR4-not transcription complex, putative
#=GF AC 1.25.40.180/FF/000062
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 69.876
#=GS A2G0U7/726-913      AC A2G0U7
#=GS A2G0U7/726-913      OS Trichomonas vaginalis
#=GS A2G0U7/726-913      DE Uncharacterized protein
#=GS A2G0U7/726-913      DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS C4M3Y6/707-924      AC C4M3Y6
#=GS C4M3Y6/707-924      OS Entamoeba histolytica
#=GS C4M3Y6/707-924      DE Uncharacterized protein
#=GS C4M3Y6/707-924      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS K2GUA5/263-487      AC K2GUA5
#=GS K2GUA5/263-487      OS Entamoeba nuttalli P19
#=GS K2GUA5/263-487      DE Uncharacterized protein
#=GS K2GUA5/263-487      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba nuttalli; 
#=GS B0E6T7/709-924      AC B0E6T7
#=GS B0E6T7/709-924      OS Entamoeba dispar SAW760
#=GS B0E6T7/709-924      DE CCR4-not transcription complex, putative
#=GS B0E6T7/709-924      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba dispar; 
#=GS M2Q985/510-728      AC M2Q985
#=GS M2Q985/510-728      OS Entamoeba histolytica KU27
#=GS M2Q985/510-728      DE CCR4not transcription complex, putative
#=GS M2Q985/510-728      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS N9V510/377-595      AC N9V510
#=GS N9V510/377-595      OS Entamoeba histolytica HM-1:IMSS-A
#=GS N9V510/377-595      DE CCR4-not transcription complex, putative
#=GS N9V510/377-595      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M3TB38/377-595      AC M3TB38
#=GS M3TB38/377-595      OS Entamoeba histolytica HM-1:IMSS-B
#=GS M3TB38/377-595      DE Uncharacterized protein
#=GS M3TB38/377-595      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M7W0B9/377-595      AC M7W0B9
#=GS M7W0B9/377-595      OS Entamoeba histolytica HM-3:IMSS
#=GS M7W0B9/377-595      DE CCR4-not transcription complex, putative
#=GS M7W0B9/377-595      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS C4LUT6/1124-1329    AC C4LUT6
#=GS C4LUT6/1124-1329    OS Entamoeba histolytica
#=GS C4LUT6/1124-1329    DE Uncharacterized protein
#=GS C4LUT6/1124-1329    DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS A0A175JFQ8/721-927  AC A0A175JFQ8
#=GS A0A175JFQ8/721-927  OS Entamoeba histolytica
#=GS A0A175JFQ8/721-927  DE Uncharacterized protein
#=GS A0A175JFQ8/721-927  DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS B0EEH9/714-927      AC B0EEH9
#=GS B0EEH9/714-927      OS Entamoeba dispar SAW760
#=GS B0EEH9/714-927      DE Uncharacterized protein
#=GS B0EEH9/714-927      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba dispar; 
#=GS M7WHX6/408-615      AC M7WHX6
#=GS M7WHX6/408-615      OS Entamoeba histolytica HM-3:IMSS
#=GS M7WHX6/408-615      DE CCR4-not transcription complex, putative
#=GS M7WHX6/408-615      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS K2H3K2/300-515      AC K2H3K2
#=GS K2H3K2/300-515      OS Entamoeba nuttalli P19
#=GS K2H3K2/300-515      DE Uncharacterized protein
#=GS K2H3K2/300-515      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba nuttalli; 
#=GS N9ULM1/402-615      AC N9ULM1
#=GS N9ULM1/402-615      OS Entamoeba histolytica HM-1:IMSS-A
#=GS N9ULM1/402-615      DE CCR4-not transcription complex, putative
#=GS N9ULM1/402-615      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M3TU16/402-615      AC M3TU16
#=GS M3TU16/402-615      OS Entamoeba histolytica HM-1:IMSS-B
#=GS M3TU16/402-615      DE Uncharacterized protein
#=GS M3TU16/402-615      DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GS M2SDU9/1147-1352    AC M2SDU9
#=GS M2SDU9/1147-1352    OS Entamoeba histolytica KU27
#=GS M2SDU9/1147-1352    DE CCR4not transcription complex, putative
#=GS M2SDU9/1147-1352    DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba histolytica; 
#=GF SQ 16
A2G0U7/726-913              -----------------------QQLIDSNSIQSVLEKHTNQTNYIALQIVQA--ISEHPNKLDSLSKSVLQ-------NNFERPVCYAISYTVTT--IIMENNQFDSILQSKLILLGKFLGILTLMQTKCVTNNILNIKELIFYCLSVGKLYPCISFILSLFYESSK--FFYPPNPFTSGILQILASIAAIPGIKGSIKFRVMSLLNHFGTNLENINQFLDLF---------------------
C4M3Y6/707-924              -------LLDSKNVSIIKNIVSSTENIEGLNREQLKQEIEKVFDLLKPQANHKKVLTEISLFIIALLNENNQQECIRFVQEMESTTEHLFSFTIESINIFLKLREYDKHSASLFESLGSLLGLLTIGMNKPLRSIHLRPKILLTDQLTKENYDVMLEFIIHFLMASSNSTVFTPNNPWIQPLLQFVCETSLSP-----------ELCLHH----ESSNKLLNKLHISPEQYLTVHPIRIA-----
K2GUA5/263-487              INIKLPSLLDSKNVSIIKNIVSSIENIEGLNGEQLKQEIEKVFDLLKPQANHKKVLTEISLFIIALLNENNQPECIRFVQEMESTTEHLFSFTIESINIFLKLREYDKHSASLFESLGSLLGLLTIGMNKPLRSIHLRPKILLTDQLTKENYDVMLEFIIHFLMASSNSTVFTPNNPWIQPLLQFVCETSLSP-----------ELCLHH----ESSNKLLNKLHISPEQYLTVHPIRIA-----
B0E6T7/709-924              ---------DSKNVSIIKNIVSSRENTEGLNGEQLKEEIEKVFELLKPQPNHKKVLTEISLFVIALLNEKNQKECIQFVQEVESTTEHLFSFTIESINIFLKLREYDRQSASLFESLGSLLGLLTIGMNKPLRSNHLRPKILLTDQLTRENYDVMLEFIIHFLMASSNSTVFTPNNPWIQPLLQFVCETSLSP-----------ELCSHH----ESSNKLLNKLHISPEQYLTIHPIRIE-----
M2Q985/510-728              ------SLLDSKNVSIIKNIVSSTENIEGLNREQLKQEIEKVFDLLKPQANHKKVLTEISLFIIALLNENNQQECIRFVQEMESTTEHLFSFTIESINIFLKLREYDKHSASLFESLGSLLGLLTIGMNKPLRSIHLRPKILLTDQLTKENYDVMLEFIIHFLMASSNSTVFTPNNPWIQPLLQFVCETSLSP-----------ELCLHH----ESSNKLLNKLHISPEQYLTVHPIRIA-----
N9V510/377-595              ------SLLDSKNVSIIKNIVSSTENIEGLNREQLKQEIEKVFDLLKPQANHKKVLTEISLFIIALLNENNQQECIRFVQEMESTTEHLFSFTIESINIFLKLREYDKHSASLFESLGSLLGLLTIGMNKPLRSIHLRPKILLTDQLTKENYDVMLEFIIHFLMASSNSTVFTPNNPWIQPLLQFVCETSLSP-----------ELCLHH----ESSNKLLNKLHISPEQYLTVHPIRIA-----
M3TB38/377-595              ------SLLDSKNVSIIKNIVSSTENIEGLNREQLKQEIEKVFDLLKPQANHKKVLTEISLFIIALLNENNQQECIRFVQEMESTTEHLFSFTIESINIFLKLREYDKHSASLFESLGSLLGLLTIGMNKPLRSIHLRPKILLTDQLTKENYDVMLEFIIHFLMASSNSTVFTPNNPWIQPLLQFVCETSLSP-----------ELCLHH----ESSNKLLNKLHISPEQYLTVHPIRIA-----
M7W0B9/377-595              ------SLLDSKNVSIIKNIVSSTENIEGLNREQLKQEIEKVFDLLKPQANHKKVLTEISLFIIALLNENNQQECIRFVQEMESTTEHLFSFTIESINIFLKLREYDKHSASLFESLGSLLGLLTIGMNKPLRSIHLRPKILLTDQLTKENYDVMLEFIIHFLMASSNSTVFTPNNPWIQPLLQFVCETSLSP-----------ELCLHH----ESSNKLLNKLHISPEQYLIVHPIRIA-----
C4LUT6/1124-1329            ----------------------CFEDISSMSIEQIKKESENVFNTFKPAQMTE--MIETSLFMIAIIRESTQPKCIDTIQSFGFSLDKLNLFTVEMINMLLKRREYDKQTASLFESLGSLLGLLTIGMNKPLRSNKLVPKSLLTDQLTVENFDVMLEFVVHFLFSSNKSDIFTPNNPWIVPLLQVVCEVSLSP-----------ELLTHH----NSIEKLLQLLHISAKDYLECHPLRSSAEDSI
A0A175JFQ8/721-927          ---------------------GCFEDISSMSIEQIKKESENVFNTFKPAQMTE--MIETSLFMIAIIRESTQPKCIDTIQSFGFSLDKLNLFTVEMINMLLKRREYDKQTASLFESLGSLLGLLTIGMNKPLRSNKLVPKSLLTDQLTVENFDVMLEFVVHFLFSSNKSDIFTPNNPWIVPLLQVVCEVSLSP-----------ELLTHH----NSIEKLLQLLHISAKDYLECHPLRSSAEDSI
B0EEH9/714-927              --------------SVIRSLCGCFEDISSMSIEQIKKESQNLLNTFKSTQTNE--MIETSLFMIAITRESTQPKCIDIIQSFGFSLDNLNSFTIEMINILLKRREYDKQTASLFESLGSLLGLLTIGMNKPLRSNKLVPKSLLTDQLTIENFDVMLEFVVHFLFSSNKSDIFTPNNPWIVPLLQVVCEVSLSP-----------ELMIHH----SSIEKLLQSLHISAKDYLECHPLRSSAEDSI
M7WHX6/408-615              --------------------CGCFEDISSMSIEQIKKESENVFNTFKPAQMTE--MIETSLFMIAIIRESTQPKCIDTIQSFGFSLDKLNLFTVEMINMLLKRREYDKQTASLFESLGSLLGLLTIGMNKPLRSNKLVPKSLLTDQLTVENFDVMLEFVVHFLFSSNKSDIFTPNNPWIVPLLQVVCEVSLSP-----------ELLTHH----NSIEKLLQLLHISAKDYLECHPLRSSAEDSI
K2H3K2/300-515              ------------SVSVIRTLCGCFEDISSMSIEQIKKESENVFNTFKPAQMTE--MIETSLFMVAIIRESTQSKCIDTIQSFGFSLDKLNLFTVEMINMLLKRREYDKQTASLFESLGSLLGLLTIGMNKPLRSNKLVPKSLLTDQLTVENFDVMLEFVVHFLFSSNKSDIFTPNNPWIVPLLQVVCEVSLSP-----------ELITHH----SSIEKLLQLLHISAKDYLECHPLRSSAEDSI
N9ULM1/402-615              --------------SVIRTLCGCFEDISSMSIEQIKKESENVFNTFKPAQMTE--MIETSLFMIAIIRESTQPKCIDTIQSFGFSLDKLNLFTVEMINMLLKRREYDKQTASLFESLGSLLGLLTIGMNKPLRSNKLVPKSLLTDQLTVENFDVMLEFVVHFLFSSNKSDIFTPNNPWIVPLLQVVCEVSLSP-----------ELLTHH----NSIEKLLQLLHISAKDYLECHPLRSSAEDSI
M3TU16/402-615              --------------SVIRTLCGCFEDISSMSIEQIKKESENVFNTFKPAQMTE--MIETSLFMIAIIRESTQPKCIDTIQSFGFSLDKLNLFTVEMINMLLKRREYDKQTASLFESLGSLLGLLTIGMNKPLRSNKLVPKSLLTDQLTVENFDVMLEFVVHFLFSSNKSDIFTPNNPWIVPLLQVVCEVSLSP-----------ELLTHH----NSIEKLLQLLHISAKDYLECHPLRSSAEDSI
M2SDU9/1147-1352            ----------------------CFEDISSMSIEQIKKESENVFNTFKPAQMTE--MIETSLFMIAIIRESTQPKCIDTIQSFGFSLDKLNLFTVEMINMLLKRREYDKQTASLFESLGSLLGLLTIGMNKPLRSNKLVPKSLLTDQLTVENFDVMLEFVVHFLFSSNKSDIFTPNNPWIVPLLQVVCEVSLSP-----------ELLTHH----NSIEKLLQLLHISAKDYLECHPLRSSAEDSI
#=GC scorecons              00000000011111323222234374856564775657466666457654445116594766567645744934663357456454557458977466657747789654796766997799799766796777549469497666974776676779767775596663596979977477995777577790000000000079449700005756779547666444663366463311111
#=GC scorecons_70           ________________________*_*_____**_*_*_*__*___**_________*_***_***__*__*__**___*________*__****_***_**_*****__************************__*_**_*******_**_*******_***__*__*__********_****_***_****___________**__**_____*__***__****___**__**_*_______
#=GC scorecons_80           ________________________*_*_____*____*___________________*_*____*______*_______*___________**_______**_****____*_*__**_*******__**_*_*__*__*_**___**_**____*_*___**__*_____*_*_**_*__***_*___*__*____________*__**_____*__***__*_____________________
#=GC scorecons_90           __________________________*______________________________*_____________*___________________**____________**____*____**__**_**____*______*__*_*____*__________*_______*_____*_*_**_____**________*____________*__*___________*________________________
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