# STOCKHOLM 1.0 #=GF ID 1.25.40.1040/FF/000011 #=GF DE Related to RNA14-component of pre-mRNA 3`-end processing factor CF I #=GF AC 1.25.40.1040/FF/000011 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 68.140 #=GS P25991/321-579 AC P25991 #=GS P25991/321-579 OS Drosophila melanogaster #=GS P25991/321-579 DE Protein suppressor of forked #=GS P25991/321-579 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS P25991/321-579 DR GO; GO:0005848; GO:1903220; #=GS Q4PCV8/585-787 AC Q4PCV8 #=GS Q4PCV8/585-787 OS Ustilago maydis 521 #=GS Q4PCV8/585-787 DE mRNA 3'-end-processing protein RNA14 #=GS Q4PCV8/585-787 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; #=GS P0CO13/641-858 AC P0CO13 #=GS P0CO13/641-858 OS Cryptococcus neoformans var. neoformans B-3501A #=GS P0CO13/641-858 DE mRNA 3'-end-processing protein RNA14 #=GS P0CO13/641-858 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; #=GS V5ES34/531-737 AC V5ES34 #=GS V5ES34/531-737 OS Kalmanozyma brasiliensis GHG001 #=GS V5ES34/531-737 DE Uncharacterized protein #=GS V5ES34/531-737 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Kalmanozyma; Kalmanozyma brasiliensis; #=GS A0A0F7RS16/557-757 AC A0A0F7RS16 #=GS A0A0F7RS16/557-757 OS Sporisorium scitamineum #=GS A0A0F7RS16/557-757 DE Related to RNA14-component of pre-mRNA 3`-end processing factor CF I #=GS A0A0F7RS16/557-757 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium scitamineum; #=GS E6R0T7/657-874 AC E6R0T7 #=GS E6R0T7/657-874 OS Cryptococcus gattii WM276 #=GS E6R0T7/657-874 DE Cleavage stimulation factor, 77kDa subunit, putative #=GS E6R0T7/657-874 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; #=GS I2FZL0/539-738 AC I2FZL0 #=GS I2FZL0/539-738 OS Ustilago hordei Uh4857-4 #=GS I2FZL0/539-738 DE Related to RNA14-component of pre-mRNA 3`-end processing factor CF I #=GS I2FZL0/539-738 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago hordei; #=GS A0A1K0HER1/533-738 AC A0A1K0HER1 #=GS A0A1K0HER1/533-738 OS Ustilago bromivora #=GS A0A1K0HER1/533-738 DE Related to RNA14-component of pre-mRNA 3`-end processing factor CF I #=GS A0A1K0HER1/533-738 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago bromivora; #=GS A0A2N8UBM9/571-776 AC A0A2N8UBM9 #=GS A0A2N8UBM9/571-776 OS Sporisorium reilianum f. sp. reilianum #=GS A0A2N8UBM9/571-776 DE Related to RNA14-component of pre-mRNA 3`-end processing factor CF I #=GS A0A2N8UBM9/571-776 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; #=GS A0A095C0U9/646-862 AC A0A095C0U9 #=GS A0A095C0U9/646-862 OS Cryptococcus gattii VGII R265 #=GS A0A095C0U9/646-862 DE mRNA 3'-end-processing protein RNA14 #=GS A0A095C0U9/646-862 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; #=GS A0A0D0TV54/645-862 AC A0A0D0TV54 #=GS A0A0D0TV54/645-862 OS Cryptococcus gattii CA1280 #=GS A0A0D0TV54/645-862 DE Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence #=GS A0A0D0TV54/645-862 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIII; #=GS A0A0D0YN01/642-859 AC A0A0D0YN01 #=GS A0A0D0YN01/642-859 OS Cryptococcus gattii VGIV IND107 #=GS A0A0D0YN01/642-859 DE Unplaced genomic scaffold supercont2.15, whole genome shotgun sequence #=GS A0A0D0YN01/642-859 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIV; #=GS A0A226BMN1/642-858 AC A0A226BMN1 #=GS A0A226BMN1/642-858 OS Cryptococcus neoformans var. grubii Bt85 #=GS A0A226BMN1/642-858 DE mRNA 3'-end-processing protein RNA14 #=GS A0A226BMN1/642-858 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; #=GS P0CO12/641-858 AC P0CO12 #=GS P0CO12/641-858 OS Cryptococcus neoformans var. neoformans JEC21 #=GS P0CO12/641-858 DE mRNA 3'-end-processing protein RNA14 #=GS P0CO12/641-858 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; #=GS A0A0D0WUZ0/645-862 AC A0A0D0WUZ0 #=GS A0A0D0WUZ0/645-862 OS Cryptococcus gattii EJB2 #=GS A0A0D0WUZ0/645-862 DE Unplaced genomic scaffold supercont1.217, whole genome shotgun sequence #=GS A0A0D0WUZ0/645-862 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; #=GS A0A0D0SY72/646-862 AC A0A0D0SY72 #=GS A0A0D0SY72/646-862 OS Cryptococcus gattii VGII Ram5 #=GS A0A0D0SY72/646-862 DE Unplaced genomic scaffold supercont1.17, whole genome shotgun sequence #=GS A0A0D0SY72/646-862 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; #=GS A0A225ZWX8/642-858 AC A0A225ZWX8 #=GS A0A225ZWX8/642-858 OS Cryptococcus neoformans var. grubii c45 #=GS A0A225ZWX8/642-858 DE mRNA 3'-end-processing protein RNA14 #=GS A0A225ZWX8/642-858 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; #=GF SQ 17 P25991/321-579 -ISPILCVPVVNQIEWVMAFAWWWAKDVQAAKIFADECANILERSINGVLNRNALLYFAYADFEEGRLKYEKVHTMYNKLLQLPDIDPTLVYVQYMKFARRAEGIKSARSIFKKAREDVRSRYHIFVAAALMEYYCSKDKEIAFRIFELGLKRFGGSPEYVMCYIDYLSHLNEDNNTRVLFERVLSSGGLSPHKSVEVWNRFLEFESNIGDLSSIVKVERRRSAVFEN---LKEYEGKETAQLVDRYKFLDLYPCTSTELKSI Q4PCV8/585-787 ---------------------------VDGEERERERKAG-----------------------ELLQIRKQELQAAAKPEIEGLKEASALVWIKYMHFLRRTEGIRPARSVFSRARKSPHCTWQVFEASALMEYHCSKDAVVATKVFELALKTFGSDEAFVVRYLDFLISMNDDSNARALFERVI--GTFAPERARPIWERWAKYEYNFGDSVAIQKLESRLAETYPDEPATKRFIARSSYMDLDLVGPRDL--------GIR P0CO13/641-858 SEKAAVAAAVGDSI------------DADGNDISDIQRLV-----------------------EEREQRGALVAQRRGKDIEELMVGISVVWIMYMRFARRAEGIKAARGVFGKARKSPHLTWQVFEASALMEYHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSINDDNNARALFERSV--VRIMGDKARPLWDAWARYEYTYGDLSAVHKLEARMSEVFPEDAPLKRFAQRWSYNGIDQIAIRDL--------GFN V5ES34/531-737 -----------GDV------------DVDGEERERERKAG-----------------------EQVQARKQALQAAASPEIEGLKEASALVWIKFMHFLRRTEGIRAARGVFSRARKSPHCTWQIFEASALMEYHCSKDAVVATKVFELALKTFGSDEAFVVRYLDFLISMNDDSNARALFERVI--GTFSPERARPIWDRWSKYEYNFGDSVAIQKLEARLAESYPDEPATKRFVARNSYMDLDLVGPRDL--------GLQ A0A0F7RS16/557-757 -----------------------------GEERERERKAG-----------------------QQMQARKQALQAAATPEIEGLKEASALVWIKYMHFLRRTEGIRPARGVFSRARKSPHCTWQIFEASALMEYHCSKDAVVATKVFELALKTFGHDEAFVVRYLDFLISMNDDGNARALFERVI--GTFSPERARPIWDRWAKYEYNFGDSIAIQKIEARLAETYPDEPATKRFVARSSYMDLDLVGPRDL--------GIQ E6R0T7/657-874 SEKAAAAAAVGDSI------------DVDGNDISDIQRLV-----------------------EEREQRGELVAQRRGRDVEELMIGISVVWIMYMRFARRAEGIKAARGVFGKARKSPHLTWHVFEASALMEYHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSINDDNNARALFERSA--VRITGDKARPLWDAWARYEYTYGDLSAVHKLEARFSEVFPEDAPLKRFAQRWSYNGIDQIAIRDL--------GFN I2FZL0/539-738 ------------------------------EERERERKAG-----------------------EQLQARKQALQRQANPEIEGLKEATALVWIKYMHFLRRTEGIRPARGVFSRARKSPHCTWQIFEASALMEYHCSKDPVVATKVFELALKTFGNDEAFVVRYLDFLISINDDSNARALFERVI--GTFSPDRARPIWDRWSKYEYNFGDTVAIQKLESRLAETYPDEPAIKRFAARSSYMDLDLVGPRDL--------GLQ A0A1K0HER1/533-738 ------------DV------------DVDGEERERERKAG-----------------------EQLQARKQALQRQANPEIEGLKEATALVWIKYMHFLRRTEGIRPARGVFSRARKSPHCTWQIFEASALMEYHCSKDPVVATKVFELALKTFGNDEAFVVRYLDFLISINDDSNARALFERVI--GTFSPDRARPIWDRWSKYEYNFGDTVAIQKLESRLAETYPDEPAIKRFAARSSYMDLDLVGPRDL--------GLQ A0A2N8UBM9/571-776 ------------DV------------DVDGEERERERKAG-----------------------EQVQARKQALQAAATPEIEGLKEASALVWIKYMHFLRRTEGIRPARGVFSRARKSAHCTWKVFEASALMEYHCSKDAVVATKVFELALKTFGHDEAFVVRYLDFLISMNDDSNARALFERVI--GTFSPERARPIWDRWARYEYNFGDSVAMHKIETRLAETYPDEPATKRFIARSSYMDLDLVGPRDL--------GIQ A0A095C0U9/646-862 -EKAAAAAAVGDSI------------DVDGNDISDIQRLV-----------------------EEREQRGELVAQRRGKDIEELMIGISVVWIMYMRFARRAEGIKAARGVFGKARKSPHLTWHVFEASALMEYHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSINDDNNARALFERSA--VRVTGDKARPLWDAWARYEYTYGDLSAVHKLEARFSEVFPEDAPLKRFAQRWSYNGIDQIAIRDL--------GFN A0A0D0TV54/645-862 SEKAAAAAAVGDSI------------DVDGNDISDIQRLV-----------------------EEREQRGELVAQRRGKDVEELMIGISVVWIMYMRFARRAEGIKAARGVFGKARKSPHLTWHVFEASALMEYHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSINDDNNARALFERSA--VRITGDKARPLWDAWARYEYTYGDLSAVHKLEARFSEVFPEDAPLKRFAQRWSYNGIDQIAIRDL--------GFN A0A0D0YN01/642-859 SEKAAVAAAVGDSI------------DVDGNDISDIQRLV-----------------------EEREQRGELVAQRRGKDVEELMIGISVVWIMYMRFARRAEGIKAARGVFGKARKSPHLTWHVFEASALMEYHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSINDDNNARALFERSA--VRITGDKARPLWDAWARYEYTYGDLSAVHKLEARISEVFPEDAPLKRFAQRWSYNGIDQIAIRDL--------GFN A0A226BMN1/642-858 -EKAAAAAAVGDSI------------DVDGNDISDIQRLV-----------------------EEREQRGELVAQRRGKDIEELMVGISVVWIMYMRFARRAEGIKAARGVFGKARKSPHLTWHVFEASALMEYHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSINDDNNARALFERSA--VRIMGDKARPLWDAWARYEYTYGDLSAVHKLEARFSEVFPEDAPLKRFAQRWSYNGIDQIAIRDL--------GFN P0CO12/641-858 SEKAAVAAAVGDSI------------DADGNDISDIQRLV-----------------------EEREQRGALVAQRRGKDIEELMVGISVVWIMYMRFARRAEGIKAARGVFGKARKSPHLTWQVFEASALMEYHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSINDDNNARALFERSV--VRIMGDKARPLWDAWARYEYTYGDLSAVHKLEARMSEVFPEDAPLKRFAQRWSYNGIDQIAIRDL--------GFN A0A0D0WUZ0/645-862 SEKAAAAAAVGDSI------------DVDGNDISDIQRLV-----------------------EEREQRGELVAQRRGRDVEELMIGISVVWIMYMRFARRAEGIKAARGVFGKARKSPHLTWHVFEASALMEYHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSINDDNNARALFERSA--VRITGDKARPLWDAWARYEYTYGDLSAVHKLEARFSEVFPEDAPLKRFAQRWSYNGIDQIAIRDL--------GFN A0A0D0SY72/646-862 -EKAAAAAAVGDSI------------DVDGNDISDIQRLV-----------------------EEREQRGELVAQRRGKDIEELMIGISVVWIMYMRFARRAEGIKAARGVFGKARKSPHLTWHVFEASALMEYHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSINDDNNARALFERSA--VRVTGDKARPLWDAWARYEYTYGDLSAVHKLEARFSEVFPEDAPLKRFAQRWSYNGIDQIAIRDL--------GFN A0A225ZWX8/642-858 -EKAAAAAAVGDSI------------DVDGNDITDIQRLV-----------------------EEREQRGELVAQRRGKDIEELMVGISVVWIMYMRFARRAEGIKAARGVFGKARKSPHLTWHVFEASALMEYHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSINDDNNARALFERSA--VRIMGDKARPLWDAWARYEYTYGDLSAVHKLEARFSEVFPEDAPLKRFAQRWSYNGIDQIAIRDL--------GFN #=GC scorecons 01222122221234000000000000555656444455540000000000000000000000085354845464444445674744545697848959599699975997895799776747767979799999856996589577999699496474579659758957698959797999955005454567777697575689766994576596959467577654459785483774469455479900000000744 #=GC scorecons_70 _____________________________*_________________________________*____*___*_______**_*_____****_**_*_*******_*****_*******_**************__**__**_*****_**_*__*__***_**_**_*****_********__________****_**_*__***__**__**_***_*__*_**_____***__*_**___*____***________*__ #=GC scorecons_80 _______________________________________________________________*____*____________*_*______***_**_*_**_***__**_**__****_*_**__*_********__**__**___***_**_*__*__**__**_**_*_***_********___________*___**_*__***__**__*__*_*_*__*_*______***__*_*____*_____**________*__ #=GC scorecons_90 _______________________________________________________________*__________________________*___**_*_**_***__**__*__**_________*_*_*****___**___*___***_**_*______*__*__**___*_*_*_*_****_______________*_____**___**_____*_*_*___________*_*_________*_____**___________ //