# STOCKHOLM 1.0 #=GF ID 1.20.58.90/FF/000014 #=GF DE Type III secretion apparatus needle protein YscF #=GF AC 1.20.58.90/FF/000014 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 36.566 #=GS P95434/3-84 AC P95434 #=GS P95434/3-84 OS Pseudomonas aeruginosa PAO1 #=GS P95434/3-84 DE Type III export protein PscF #=GS P95434/3-84 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS P95434/3-84 DR GO; GO:0030254; GO:0030257; #=GS Q663I4/8-86 AC Q663I4 #=GS Q663I4/8-86 OS Yersinia pseudotuberculosis IP 32953 #=GS Q663I4/8-86 DE YscF putative type III secretion protein #=GS Q663I4/8-86 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pseudotuberculosis; #=GS Q663I4/8-86 DR GO; GO:0042000; #=GS A0A157WID5/3-84 AC A0A157WID5 #=GS A0A157WID5/3-84 OS Enterobacter cloacae #=GS A0A157WID5/3-84 DE Pseudomonas secretion protein F #=GS A0A157WID5/3-84 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex; Enterobacter cloacae; #=GS A0A1G5LV51/3-84 AC A0A1G5LV51 #=GS A0A1G5LV51/3-84 OS Acinetobacter baumannii #=GS A0A1G5LV51/3-84 DE Pseudomonas secretion protein F #=GS A0A1G5LV51/3-84 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex; Acinetobacter baumannii; #=GS A0A1S1C2L4/3-84 AC A0A1S1C2L4 #=GS A0A1S1C2L4/3-84 OS Pseudomonas sp. HMSC059F05 #=GS A0A1S1C2L4/3-84 DE EscF/YscF/HrpA family type III secretion system needle major subunit #=GS A0A1S1C2L4/3-84 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC059F05; #=GS A0A1F0I2F7/3-84 AC A0A1F0I2F7 #=GS A0A1F0I2F7/3-84 OS Pseudomonas sp. HMSC065H01 #=GS A0A1F0I2F7/3-84 DE EscF/YscF/HrpA family type III secretion system needle major subunit #=GS A0A1F0I2F7/3-84 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC065H01; #=GS A0A2V2TI91/3-84 AC A0A2V2TI91 #=GS A0A2V2TI91/3-84 OS Pseudomonas sp. RW410 #=GS A0A2V2TI91/3-84 DE EscF/YscF/HrpA family type III secretion system needle major subunit #=GS A0A2V2TI91/3-84 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. RW410; #=GS A0A3S4MQP7/3-84 AC A0A3S4MQP7 #=GS A0A3S4MQP7/3-84 OS Pseudomonas fluorescens #=GS A0A3S4MQP7/3-84 DE Type III export protein #=GS A0A3S4MQP7/3-84 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens; #=GS Q7BRZ6/8-86 AC Q7BRZ6 #=GS Q7BRZ6/8-86 OS Yersinia enterocolitica #=GS Q7BRZ6/8-86 DE YscF #=GS Q7BRZ6/8-86 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia enterocolitica; #=GS A0A0U1EWL5/8-86 AC A0A0U1EWL5 #=GS A0A0U1EWL5/8-86 OS Yersinia intermedia #=GS A0A0U1EWL5/8-86 DE Putative type III secretion protein #=GS A0A0U1EWL5/8-86 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia intermedia; #=GS A0A3N4BYH7/8-86 AC A0A3N4BYH7 #=GS A0A3N4BYH7/8-86 OS Yersinia pestis #=GS A0A3N4BYH7/8-86 DE EscF/YscF/HrpA family type III secretion system needle major subunit #=GS A0A3N4BYH7/8-86 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS A0A0M1V1T4/8-86 AC A0A0M1V1T4 #=GS A0A0M1V1T4/8-86 OS Yersinia pestis biovar Orientalis str. IP275 #=GS A0A0M1V1T4/8-86 DE Type III secretion apparatus needle protein YscF #=GS A0A0M1V1T4/8-86 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; Yersinia pestis subsp. pestis; #=GS W1MKQ0/3-84 AC W1MKQ0 #=GS W1MKQ0/3-84 OS Pseudomonas aeruginosa VRFPA03 #=GS W1MKQ0/3-84 DE Type III export protein pscF #=GS W1MKQ0/3-84 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS V6AGR0/3-84 AC V6AGR0 #=GS V6AGR0/3-84 OS Pseudomonas aeruginosa MH27 #=GS V6AGR0/3-84 DE Uncharacterized protein #=GS V6AGR0/3-84 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS A0A0H2Z996/3-84 AC A0A0H2Z996 #=GS A0A0H2Z996/3-84 OS Pseudomonas aeruginosa UCBPP-PA14 #=GS A0A0H2Z996/3-84 DE Type III export protein PscF #=GS A0A0H2Z996/3-84 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS A0A072ZGT9/3-84 AC A0A072ZGT9 #=GS A0A072ZGT9/3-84 OS Pseudomonas aeruginosa #=GS A0A072ZGT9/3-84 DE EscF/YscF/HrpA family type III secretion system needle major subunit #=GS A0A072ZGT9/3-84 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS Q01247/8-86 AC Q01247 #=GS Q01247/8-86 OS Yersinia enterocolitica #=GS Q01247/8-86 DE Yop proteins translocation protein F #=GS Q01247/8-86 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia enterocolitica; #=GS A0A0E1NLA9/8-86 AC A0A0E1NLA9 #=GS A0A0E1NLA9/8-86 OS Yersinia pestis Antiqua #=GS A0A0E1NLA9/8-86 DE Type III secretion protein #=GS A0A0E1NLA9/8-86 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS O68691/8-86 AC O68691 #=GS O68691/8-86 OS Yersinia pestis #=GS O68691/8-86 DE Putative type III secretion protein #=GS O68691/8-86 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS A0A3G5IQF8/8-86 AC A0A3G5IQF8 #=GS A0A3G5IQF8/8-86 OS Yersinia pseudotuberculosis #=GS A0A3G5IQF8/8-86 DE EscF/YscF/HrpA family type III secretion system needle major subunit #=GS A0A3G5IQF8/8-86 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pseudotuberculosis; #=GS E8PSR2/8-86 AC E8PSR2 #=GS E8PSR2/8-86 OS Yersinia pestis Java 9 #=GS E8PSR2/8-86 DE Type III secretion apparatus needle protein YscF #=GS E8PSR2/8-86 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GF SQ 21 P95434/3-84 QIFNPNPGN---TLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQK- Q663I4/8-86 -----TKGTDIADLDAVAQTLKKPADDANKAVNDSIAALK--DKPDNPALLADLQHSINKWSVIYNINSTIVRSMKDLMQGILQKF A0A157WID5/3-84 QIFNPNPGN---TLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQK- A0A1G5LV51/3-84 QIFNPNPGN---TLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQK- A0A1S1C2L4/3-84 QIFNPNPGN---TLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQK- A0A1F0I2F7/3-84 QIFNPNPGN---TLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQK- A0A2V2TI91/3-84 QIFNPNPGN---TLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQK- A0A3S4MQP7/3-84 QIFNPNPGN---TLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQK- Q7BRZ6/8-86 -----TKGNDIADLDAVAQTLKKPADDANKAVNDSIAALK--DTPDNPALLADLQHSINKWSVIYNISSTIVRSMKDLMQGILQKF A0A0U1EWL5/8-86 -----TKGTDIADLDAVAQTLKKPADDANKAVNDSIAALK--DKPDNPALLADLQHSINKWSVIYNINSTIVRSMKDLMQGILQKF A0A3N4BYH7/8-86 -----TKGTDIADLDAVAQTLKKPADDANKAVNDSIAALK--DKPDNPALLADLQHSINKWSVIYNINSTIVRSMKDLMQGILQKF A0A0M1V1T4/8-86 -----TKGTDIADLDAVAQTLKKPADDANKAVNDSIAALK--DKPDNPALLADLQHSINKWSVIYNINSTIVRSMKDLMQGILQKF W1MKQ0/3-84 QIFNPNPGN---TLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQK- V6AGR0/3-84 QIFNPNPGN---TLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQK- A0A0H2Z996/3-84 QIFNPNPGN---TLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQK- A0A072ZGT9/3-84 QIFNPNPGN---TLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQK- Q01247/8-86 -----TKGNDIADLDAVAQTLKKPADDANKAVNDSIAALK--DTPDNPALLADLQHSINKWSVIYNISSTIVRSMKDLMQGILQKF A0A0E1NLA9/8-86 -----TKGTDIADLDAVAQTLKKPADDANKAVNDSIAALK--DKPDNPALLADLQHSINKWSVIYNINSTIVRSMKDLMQGILQKF O68691/8-86 -----TKGTDIADLDAVAQTLKKPADDANKAVNDSIAALK--DKPDNPALLADLQHSINKWSVIYNINSTIVRSMKDLMQGILQKF A0A3G5IQF8/8-86 -----TKGTDIADLDAVAQTLKKPADDANKAVNDSIAALK--DKPDNPALLADLQHSINKWSVIYNINSTIVRSMKDLMQGILQKF E8PSR2/8-86 -----TKGTDIADLDAVAQTLKKPADDANKAVNDSIAALK--DKPDNPALLADLQHSINKWSVIYNINSTIVRSMKDLMQGILQKF #=GC scorecons 22222659622259969956996596599959996959962295699999997999599999999997997596679999999992 #=GC scorecons_70 _______*_____*****_***__**_***_***_*_***__*__***********_**************_*_***********_ #=GC scorecons_80 _______*_____**_**__**__*__***_***_*_**___*__*******_***_*************__*___*********_ #=GC scorecons_90 _______*_____**_**__**__*__***_***_*_**___*__*******_***_**********_**__*___*********_ //