# STOCKHOLM 1.0 #=GF ID 1.20.58.390/FF/000081 #=GF DE Proton-gated ion channel subunit pbo-5 #=GF AC 1.20.58.390/FF/000081 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 68.884 #=GS G5ECT0/275-399 AC G5ECT0 #=GS G5ECT0/275-399 OS Caenorhabditis elegans #=GS G5ECT0/275-399 DE Proton-gated ion channel subunit pbo-5 #=GS G5ECT0/275-399 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS G5ECT0/275-399 DR GO; GO:0005230; GO:0010877; GO:0030421; GO:0045989; GO:1904731; #=GS Q19351/235-404 AC Q19351 #=GS Q19351/235-404 OS Caenorhabditis elegans #=GS Q19351/235-404 DE Proton-gated ion channel subunit pbo-6 #=GS Q19351/235-404 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q19351/235-404 DR GO; GO:0005230; #=GS H3DWY9/269-394 AC H3DWY9 #=GS H3DWY9/269-394 OS Pristionchus pacificus #=GS H3DWY9/269-394 DE Uncharacterized protein #=GS H3DWY9/269-394 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A0A2G5TU13/271-395 AC A0A2G5TU13 #=GS A0A2G5TU13/271-395 OS Caenorhabditis nigoni #=GS A0A2G5TU13/271-395 DE Uncharacterized protein #=GS A0A2G5TU13/271-395 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A261A1U8/264-384 AC A0A261A1U8 #=GS A0A261A1U8/264-384 OS Caenorhabditis latens #=GS A0A261A1U8/264-384 DE Uncharacterized protein #=GS A0A261A1U8/264-384 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; #=GS E3MEW4/266-391 AC E3MEW4 #=GS E3MEW4/266-391 OS Caenorhabditis remanei #=GS E3MEW4/266-391 DE CRE-PBO-5 protein #=GS E3MEW4/266-391 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A8X047/266-390 AC A8X047 #=GS A8X047/266-390 OS Caenorhabditis briggsae #=GS A8X047/266-390 DE Protein CBR-PBO-5 #=GS A8X047/266-390 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS G0NKR0/267-386 AC G0NKR0 #=GS G0NKR0/267-386 OS Caenorhabditis brenneri #=GS G0NKR0/267-386 DE CBN-PBO-5 protein #=GS G0NKR0/267-386 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A0A1I7U0A1/112-283 AC A0A1I7U0A1 #=GS A0A1I7U0A1/112-283 OS Caenorhabditis tropicalis #=GS A0A1I7U0A1/112-283 DE Uncharacterized protein #=GS A0A1I7U0A1/112-283 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; #=GS A0A2G5TU58/266-390 AC A0A2G5TU58 #=GS A0A2G5TU58/266-390 OS Caenorhabditis nigoni #=GS A0A2G5TU58/266-390 DE Uncharacterized protein #=GS A0A2G5TU58/266-390 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A2G5TU56/271-395 AC A0A2G5TU56 #=GS A0A2G5TU56/271-395 OS Caenorhabditis nigoni #=GS A0A2G5TU56/271-395 DE Uncharacterized protein #=GS A0A2G5TU56/271-395 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS H3FJK5/75-215 AC H3FJK5 #=GS H3FJK5/75-215 OS Pristionchus pacificus #=GS H3FJK5/75-215 DE Uncharacterized protein #=GS H3FJK5/75-215 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS G0MIF0/233-404 AC G0MIF0 #=GS G0MIF0/233-404 OS Caenorhabditis brenneri #=GS G0MIF0/233-404 DE CBN-PBO-6 protein #=GS G0MIF0/233-404 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A0A2G5SLU8/235-404 AC A0A2G5SLU8 #=GS A0A2G5SLU8/235-404 OS Caenorhabditis nigoni #=GS A0A2G5SLU8/235-404 DE Uncharacterized protein #=GS A0A2G5SLU8/235-404 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS E3MAM2/231-402 AC E3MAM2 #=GS E3MAM2/231-402 OS Caenorhabditis remanei #=GS E3MAM2/231-402 DE CRE-PBO-6 protein #=GS E3MAM2/231-402 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A8XNG3/202-357 AC A8XNG3 #=GS A8XNG3/202-357 OS Caenorhabditis briggsae #=GS A8XNG3/202-357 DE Protein CBR-PBO-6 #=GS A8XNG3/202-357 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GF SQ 16 G5ECT0/275-399 YMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSLVVSEKVPHSSTHVPLLVAYFLFNMVIVSIAAMTTGIVMKV---HRLG-----------------------------------------------RYGDEPSDFWMRCFLLKPVFRTSNRRKYRMNP- Q19351/235-404 --ISLVVPSYIICVLSIAGLFARFSTKHERQERFTLGVTAILSMAVLSLVVTEKVPHSSENVPLLIVYMHFIIVMVTIATILTSTVMRV---HAKGFRTHFLSPPNWIRKVLLIARKHANFFQQHGKVYMDIHTTAEQWGEVSRRMDYLLASVFIIIISTPTLYLFYMCFQMDHA- H3DWY9/269-394 YMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSLVVSEKVPHSSTSVPLLVIYFLFNMVTVSVAAMSTGLSMKV---HRMG-----------------------------------------------RFGREPPDWMLALFLLTPKTHMLYECKCSSTKD A0A2G5TU13/271-395 YMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSLVVSEKVPHSSTHVPLLVAYFLFNMVIVSIAAMTTGIVMKV---HRLG-----------------------------------------------RYGDEPHEFWMKLFFLRPIFRTSNRRTYRMNP- A0A261A1U8/264-384 YMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSLVVSEKVPHSSTHVPLLVAYFLFNMVIVSIAAMTTGIVMKV---HRLG-----------------------------------------------RYGDEPHEFWMKLFLLRPIFKTSNKRRY----- E3MEW4/266-391 YMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSLVVSEKVPHSSTHVPLLVAYFLFNMVIVSIAAMTTGIVMKV---HRLG-----------------------------------------------RYGDEPHEFWMKLFLLRPIFKTSNKRRYRMNPE A8X047/266-390 YMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSLVVSEKVPHSSTHVPLLVAYFLFNMVIVSIAAMTTGIVMKV---HRLG-----------------------------------------------RYGDEPHEFWMKLFFLRPIFRTSNRRTYRMNP- G0NKR0/267-386 --VTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSLVVSEKVPHSSTHVPLLVAYFLFNMVIVSIAAMTTGIVMKV---HRLG-----------------------------------------------RYGDEPHEFWLKIFLLKPIFRNSNVCFYM---- A0A1I7U0A1/112-283 YLISLVVPSYIICVLSIAGLFARFSTKHERQERFTLGVTAILSMAVLSLVVTEKVPHSSESVPLLIVYMHFIIIMVTIATILTSTVMRV---HAKGFRTHFLSPPGWIRKALFIARKHAAFFQQHGQVYMDIHTTAEQWGEVSRRMDYLLASVFIIIISTPTLYLFYMCYQMDHA- A0A2G5TU58/266-390 YMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSLVVSEKVPHSSTHVPLLVAYFLFNMVIVSIAAMTTGIVMKV---HRLG-----------------------------------------------RYGDEPHEFWMKLFFLRPIFRTSNRRTYRMNP- A0A2G5TU56/271-395 YMVTLTFPSYIMCAISVVGLFARFSTTGEREERFTLGVTAILTMAVLSLVVSEKVPHSSTHVPLLVAYFLFNMVIVSIAAMTTGIVMKV---HRLG-----------------------------------------------RYGDEPHEFWMKLFFLRPIFRTSNRRTYRMNP- H3FJK5/75-215 --SSLLIPSYIICVLSVAGLFARFSTRDERQERFSLGVTATLTLSVLSLVVTEKVPHTSDEIPILILYFHLNTLVVTVATVLTSVSMSISEWRGDTFKDKRL-------------RRHRRDFQR-----------------LADYADKVFCIVFLIILTIPFAYMTYRCASLS--- G0MIF0/233-404 YLISLVVPSYIICVLSIAGLFARFSTKHERQERFTLGVTAILSMAVLSLVVTEKVPHSSDSVPLLIVYMHFIIIMVTIATILTSTVMRV---HAKGFRTHFLSPPTWIRKALFIASKHAAFFEKHGQVYMDIHTTAEQWGEVSRRMDYLLASVFIIIISTPTLYLFYMCYQMDHA- A0A2G5SLU8/235-404 --ISLVVPSYIICVLSIAGLFARFSTKHERQERFTLGVTAILSMAVLSLVVTEKVPHSSESVPLLIVYMHFIIIMVTIATILTSTVMRV---HAKGFRTHFLSPPNWIRKGLFIARKHAAFFQQNGQVYMDIHTTAEQWGEVSRRMDYLLASVFIIIISTPTLYLFYMCFQMDHA- E3MAM2/231-402 YLISLVVPSYIICVLSIAGLFARFSTKHERQERFTLGVTAILSMAVLSLVVTEKVPHSSESVPLLIVYMHFIIIMVTIATILTSTVMRV---HAKGFRTHFLSPPNWIRKGLFIARKHAAFFQQHGQVYMDIHTTAEQWGEVSRRMDYLLASVFIIIISTPTLYLFYMCYQMDHA- A8XNG3/202-357 YLISLVVPSYIICVLSIAGLFARFSTKHERQERFTLGVTAILSMAVLSLVVTEKVPHSSESVPLLIVYMHFIIIMVTIATILTSTVMRV---HAKGFRTHFLSPPNWIRKGLFIARKHAAFFQQN----------------VSRRMDYLLASVFIIIISTPTLYLFYMCFQMDHA- #=GC scorecons 43669559999696697699999999549969998999998968899999969999989548989759558566596896659657968000854721111211101111011111121112110000000000000000011744845444454555449454445453443330 #=GC scorecons_70 ____*__******_***_********__**************_********_*******__*****_*__*__*_*_****_*__**_*___*__*_______________________________________________*__*_____________*_______________ #=GC scorecons_80 ____*__****_*__*__********__**_***********_********_*******__****__*__*____*_**___*___*_*___*__*_______________________________________________*__*_____________*_______________ #=GC scorecons_90 ____*__****_*__*__********__**_***_*****_*_*_******_*****_*__****__*__*____*__*___*___*_*___*_____________________________________________________*_____________*_______________ //