# STOCKHOLM 1.0 #=GF ID 1.20.58.390/FF/000077 #=GF DE Ligand-gated ion channel 50 #=GF AC 1.20.58.390/FF/000077 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 15.390 #=GS P41849/234-337_454-490 AC P41849 #=GS P41849/234-337_454-490 OS Caenorhabditis elegans #=GS P41849/234-337_454-490 DE Ligand-gated ion channel 50 #=GS P41849/234-337_454-490 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A016V2Y4/245-346_445-481 AC A0A016V2Y4 #=GS A0A016V2Y4/245-346_445-481 OS Ancylostoma ceylanicum #=GS A0A016V2Y4/245-346_445-481 DE Uncharacterized protein #=GS A0A016V2Y4/245-346_445-481 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GS A0A0K0G239/352-452_588-623 AC A0A0K0G239 #=GS A0A0K0G239/352-452_588-623 OS Strongyloides venezuelensis #=GS A0A0K0G239/352-452_588-623 DE Ligand-gated ion channel 50 (inferred by orthology to a C. elegans protein) #=GS A0A0K0G239/352-452_588-623 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides; Strongyloides venezuelensis; #=GS A0A0B2VZS1/324-423_533-569 AC A0A0B2VZS1 #=GS A0A0B2VZS1/324-423_533-569 OS Toxocara canis #=GS A0A0B2VZS1/324-423_533-569 DE Ligand-gated ion channel 50 #=GS A0A0B2VZS1/324-423_533-569 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Ascaridomorpha; Ascaridoidea; Toxocaridae; Toxocara; Toxocara canis; #=GS A0A0D8Y8Y4/248-354_456-492 AC A0A0D8Y8Y4 #=GS A0A0D8Y8Y4/248-354_456-492 OS Dictyocaulus viviparus #=GS A0A0D8Y8Y4/248-354_456-492 DE Cation transporter family protein #=GS A0A0D8Y8Y4/248-354_456-492 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Trichostrongyloidea; Dictyocaulidae; Dictyocaulinae; Dictyocaulus; Dictyocaulus viviparus; #=GS A0A1I7YDR1/205-306_409-445 AC A0A1I7YDR1 #=GS A0A1I7YDR1/205-306_409-445 OS Steinernema glaseri #=GS A0A1I7YDR1/205-306_409-445 DE Uncharacterized protein #=GS A0A1I7YDR1/205-306_409-445 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Steinernematidae; Steinernema; Steinernema glaseri; #=GS A0A0N4ZEJ7/340-443_573-608 AC A0A0N4ZEJ7 #=GS A0A0N4ZEJ7/340-443_573-608 OS Parastrongyloides trichosuri #=GS A0A0N4ZEJ7/340-443_573-608 DE Uncharacterized protein #=GS A0A0N4ZEJ7/340-443_573-608 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Parastrongyloides; Parastrongyloides trichosuri; #=GS A0A0N5BQG5/351-451_587-622 AC A0A0N5BQG5 #=GS A0A0N5BQG5/351-451_587-622 OS Strongyloides papillosus #=GS A0A0N5BQG5/351-451_587-622 DE Uncharacterized protein #=GS A0A0N5BQG5/351-451_587-622 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides; Strongyloides papillosus; #=GS A0A0K0EF15/329-430_573-608 AC A0A0K0EF15 #=GS A0A0K0EF15/329-430_573-608 OS Strongyloides stercoralis #=GS A0A0K0EF15/329-430_573-608 DE Uncharacterized protein #=GS A0A0K0EF15/329-430_573-608 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides; Strongyloides stercoralis; #=GS A0A2G5UJR1/233-336_442-478 AC A0A2G5UJR1 #=GS A0A2G5UJR1/233-336_442-478 OS Caenorhabditis nigoni #=GS A0A2G5UJR1/233-336_442-478 DE Uncharacterized protein #=GS A0A2G5UJR1/233-336_442-478 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS E3N6Q0/233-336_445-481 AC E3N6Q0 #=GS E3N6Q0/233-336_445-481 OS Caenorhabditis remanei #=GS E3N6Q0/233-336_445-481 DE CRE-LGC-50 protein #=GS E3N6Q0/233-336_445-481 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS K7GZB3/72-175_280-316 AC K7GZB3 #=GS K7GZB3/72-175_280-316 OS Caenorhabditis japonica #=GS K7GZB3/72-175_280-316 DE Uncharacterized protein #=GS K7GZB3/72-175_280-316 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; #=GS G0MG09/237-340_461-497 AC G0MG09 #=GS G0MG09/237-340_461-497 OS Caenorhabditis brenneri #=GS G0MG09/237-340_461-497 DE Uncharacterized protein #=GS G0MG09/237-340_461-497 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A8X863/202-305_411-447 AC A8X863 #=GS A8X863/202-305_411-447 OS Caenorhabditis briggsae #=GS A8X863/202-305_411-447 DE Protein CBR-LGC-50 #=GS A8X863/202-305_411-447 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A1I7TWW1/235-338_442-478 AC A0A1I7TWW1 #=GS A0A1I7TWW1/235-338_442-478 OS Caenorhabditis tropicalis #=GS A0A1I7TWW1/235-338_442-478 DE Uncharacterized protein #=GS A0A1I7TWW1/235-338_442-478 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; #=GS A0A2G5UJP2/72-175_281-317 AC A0A2G5UJP2 #=GS A0A2G5UJP2/72-175_281-317 OS Caenorhabditis nigoni #=GS A0A2G5UJP2/72-175_281-317 DE Uncharacterized protein #=GS A0A2G5UJP2/72-175_281-317 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A2G5UJT3/225-328_434-470 AC A0A2G5UJT3 #=GS A0A2G5UJT3/225-328_434-470 OS Caenorhabditis nigoni #=GS A0A2G5UJT3/225-328_434-470 DE Uncharacterized protein #=GS A0A2G5UJT3/225-328_434-470 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A261A139/172-275_384-420 AC A0A261A139 #=GS A0A261A139/172-275_384-420 OS Caenorhabditis remanei #=GS A0A261A139/172-275_384-420 DE Uncharacterized protein #=GS A0A261A139/172-275_384-420 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GF SQ 18 P41849/234-337_454-490 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGSKVTITSVQVDRCSMIMFPLSFLIFNVVYWSIYFMKMDRP A0A016V2Y4/245-346_445-481 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGS--TITSVQVDRCSMIMFPLSFLIFNIVYWSIYFMKMDRP A0A0K0G239/352-452_588-623 -RRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGS--TITSVQVDRISMIMFPLSFLVFNIIYWLVYFSKMDR- A0A0B2VZS1/324-423_533-569 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQI----TITSVQVDRCSMIMFPLSFLVFNITYWSIYFMKMDRP A0A0D8Y8Y4/248-354_456-492 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSASYLVYFPRITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQI----TVTSVQVDRCSMVMFPLSFLIFNIVYWSTYFMKMDRP A0A1I7YDR1/205-306_409-445 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGS--TVTSVQVDRCSMIMFPLSFLVFNITYWFIYFMKMDRP A0A0N4ZEJ7/340-443_573-608 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGSKVTITSVQVDRISMIMFPLSFLVFNIIYWLVYFSKMDR- A0A0N5BQG5/351-451_587-622 -RRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGS--TITSVQVDRISMIMFPLSFLLFNIIYWLVYFSKMDR- A0A0K0EF15/329-430_573-608 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGS--TITSVQVDRISMIMFPLSFLVFNIIYWLVYFSKMDR- A0A2G5UJR1/233-336_442-478 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGSKVTITSVQVDRCSMIMFPLSFLIFNVVYWSIYFMKMDRP E3N6Q0/233-336_445-481 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGSKVTITSVQVDRCSMIMFPLSFLIFNVVYWSIYFMKMDRP K7GZB3/72-175_280-316 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGSKVTITSVQVDRCSMIMFPLSFLIFNVVYWSIYFMKMDRP G0MG09/237-340_461-497 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGSKVTITSVQVDRCSMIMFPLSFLIFNVVYWSIYFMKMDRP A8X863/202-305_411-447 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGSKVTITSVQVDRCSMIMFPLSFLIFNVVYWSIYFMKMDRP A0A1I7TWW1/235-338_442-478 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGSKVTITSVQVDRCSMIMFPLSFLIFNVVYWSIYFMKMDRP A0A2G5UJP2/72-175_281-317 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGSKVTITSVQVDRCSMIMFPLSFLIFNVVYWSIYFMKMDRP A0A2G5UJT3/225-328_434-470 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGSKVTITSVQVDRCSMIMFPLSFLIFNVVYWSIYFMKMDRP A0A261A139/172-275_384-420 ARRYGFYLFQSYFPTSLTVISSWVGFFFDVRSVSA-------RITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGSKVTITSVQVDRCSMIMFPLSFLIFNVVYWSIYFMKMDRP #=GC scorecons 6999999999999999999999999999999999900000009999999999999999999999999999999999999999999999999999999999999999955119799999995998999999969976995699599994 #=GC scorecons_70 _**********************************_______*****************************************************************____*********_**************_**__**_****_ #=GC scorecons_80 _**********************************_______*****************************************************************____*********_**********_***_**__**_****_ #=GC scorecons_90 _**********************************_______*****************************************************************____*_*******_**_*******_**__**__**_****_ //