# STOCKHOLM 1.0 #=GF ID 1.20.58.390/FF/000069 #=GF DE Ligand-Gated ion Channel #=GF AC 1.20.58.390/FF/000069 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 59.247 #=GS Q18518/238-335_421-459 AC Q18518 #=GS Q18518/238-335_421-459 OS Caenorhabditis elegans #=GS Q18518/238-335_421-459 DE Ligand-Gated ion Channel #=GS Q18518/238-335_421-459 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A7LPG1/238-360 AC A7LPG1 #=GS A7LPG1/238-360 OS Caenorhabditis elegans #=GS A7LPG1/238-360 DE Ligand-Gated ion Channel #=GS A7LPG1/238-360 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q9N517/228-328_375-408 AC Q9N517 #=GS Q9N517/228-328_375-408 OS Caenorhabditis elegans #=GS Q9N517/228-328_375-408 DE Ligand-Gated ion Channel #=GS Q9N517/228-328_375-408 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A016UHL7/293-393_442-478 AC A0A016UHL7 #=GS A0A016UHL7/293-393_442-478 OS Ancylostoma ceylanicum #=GS A0A016UHL7/293-393_442-478 DE Uncharacterized protein #=GS A0A016UHL7/293-393_442-478 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GS H3FXQ6/188-300_371-403 AC H3FXQ6 #=GS H3FXQ6/188-300_371-403 OS Pristionchus pacificus #=GS H3FXQ6/188-300_371-403 DE Uncharacterized protein #=GS H3FXQ6/188-300_371-403 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS G0MIA2/235-332_407-447 AC G0MIA2 #=GS G0MIA2/235-332_407-447 OS Caenorhabditis brenneri #=GS G0MIA2/235-332_407-447 DE Uncharacterized protein #=GS G0MIA2/235-332_407-447 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS E3M2Y0/253-381 AC E3M2Y0 #=GS E3M2Y0/253-381 OS Caenorhabditis remanei #=GS E3M2Y0/253-381 DE CRE-LGC-41 protein #=GS E3M2Y0/253-381 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A0A2H2ILZ5/80-207 AC A0A2H2ILZ5 #=GS A0A2H2ILZ5/80-207 OS Caenorhabditis japonica #=GS A0A2H2ILZ5/80-207 DE Uncharacterized protein #=GS A0A2H2ILZ5/80-207 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; #=GS A8XQH2/239-353 AC A8XQH2 #=GS A8XQH2/239-353 OS Caenorhabditis briggsae #=GS A8XQH2/239-353 DE Protein CBR-LGC-41 #=GS A8XQH2/239-353 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A2G5SQ20/242-356 AC A0A2G5SQ20 #=GS A0A2G5SQ20/242-356 OS Caenorhabditis nigoni #=GS A0A2G5SQ20/242-356 DE Uncharacterized protein #=GS A0A2G5SQ20/242-356 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS H3FQI6/109-233 AC H3FQI6 #=GS H3FQI6/109-233 OS Pristionchus pacificus #=GS H3FQI6/109-233 DE Uncharacterized protein #=GS H3FQI6/109-233 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A0A2A6CFE0/258-381 AC A0A2A6CFE0 #=GS A0A2A6CFE0/258-381 OS Pristionchus pacificus #=GS A0A2A6CFE0/258-381 DE Lgc-41 #=GS A0A2A6CFE0/258-381 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A0A260Z5N9/241-353 AC A0A260Z5N9 #=GS A0A260Z5N9/241-353 OS Caenorhabditis remanei #=GS A0A260Z5N9/241-353 DE Uncharacterized protein #=GS A0A260Z5N9/241-353 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A8XLF4/198-298_346-379 AC A8XLF4 #=GS A8XLF4/198-298_346-379 OS Caenorhabditis briggsae #=GS A8XLF4/198-298_346-379 DE Protein CBR-LGC-42 #=GS A8XLF4/198-298_346-379 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS E3MIL1/198-298_346-379 AC E3MIL1 #=GS E3MIL1/198-298_346-379 OS Caenorhabditis remanei #=GS E3MIL1/198-298_346-379 DE CRE-LGC-42 protein #=GS E3MIL1/198-298_346-379 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS G0P726/198-298_346-379 AC G0P726 #=GS G0P726/198-298_346-379 OS Caenorhabditis brenneri #=GS G0P726/198-298_346-379 DE Uncharacterized protein #=GS G0P726/198-298_346-379 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A0A2G5UNV8/228-328_376-409 AC A0A2G5UNV8 #=GS A0A2G5UNV8/228-328_376-409 OS Caenorhabditis nigoni #=GS A0A2G5UNV8/228-328_376-409 DE Uncharacterized protein #=GS A0A2G5UNV8/228-328_376-409 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS G0P3L1/198-268_302-331_379-412 AC G0P3L1 #=GS G0P3L1/198-268_302-331_379-412 OS Caenorhabditis brenneri #=GS G0P3L1/198-268_302-331_379-412 DE Uncharacterized protein #=GS G0P3L1/198-268_302-331_379-412 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A0A2G5UMW4/175-275_323-356 AC A0A2G5UMW4 #=GS A0A2G5UMW4/175-275_323-356 OS Caenorhabditis nigoni #=GS A0A2G5UMW4/175-275_323-356 DE Uncharacterized protein #=GS A0A2G5UMW4/175-275_323-356 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A016UI76/263-363_412-448 AC A0A016UI76 #=GS A0A016UI76/263-363_412-448 OS Ancylostoma ceylanicum #=GS A0A016UI76/263-363_412-448 DE Uncharacterized protein #=GS A0A016UI76/263-363_412-448 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GS A0A016UHE6/230-330_379-415 AC A0A016UHE6 #=GS A0A016UHE6/230-330_379-415 OS Ancylostoma ceylanicum #=GS A0A016UHE6/230-330_379-415 DE Uncharacterized protein #=GS A0A016UHE6/230-330_379-415 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GS A0A2G5UN02/195-294_342-375 AC A0A2G5UN02 #=GS A0A2G5UN02/195-294_342-375 OS Caenorhabditis nigoni #=GS A0A2G5UN02/195-294_342-375 DE Uncharacterized protein #=GS A0A2G5UN02/195-294_342-375 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A016UG64/275-375_424-460 AC A0A016UG64 #=GS A0A016UG64/275-375_424-460 OS Ancylostoma ceylanicum #=GS A0A016UG64/275-375_424-460 DE Uncharacterized protein #=GS A0A016UG64/275-375_424-460 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GF SQ 23 Q18518/238-335_421-459 SRSIGYNLVQSYIPTGLIVMISWVSFWIDRRAVPARVTLSFTTLVSLTTL----------------GNGLRFGLPQVSYAKAIDLWYGACMFFVFCALLEFATINSYMRKSEKFSRHALKIDKS-------CRYLFPAAFLLWNVFYWWYYLVYTKTPID----- A7LPG1/238-360 SRSIGYNLVQSYIPTGLIVMISWVSFWIDRRAVPARVTLSFTTLVSLTTL----------------GNGLRFGLPQVSYAKAIDLWYGACMFFVFCALLEFATINSYMRKSEKFDSMAKKMQSV----VLTGRTRD--------------YLV--RGIK------ Q9N517/228-328_375-408 KRAIGFHLVQSYIPTGLIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQ----------------GNGIRYALPAVSYAKAIDYFYGVCMLFIFGVLLEFAAVNSYMRRANKYNHMSRKALSI----DKAARFAFPCVFAIFNVFYWLYYL---REP------- A0A016UHL7/293-393_442-478 KRAIGFHLVQSYIPTGLIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQ----------------GNGIRYALPPVSYAKAIDYFYGVCMLFIFGVLLEFAMVNSYMRRANKYNHMSRRALAI----DKAARFAFPSVFMLFNLVYWMYYM---REPED----Q H3FXQ6/188-300_371-403 -RSLGYNLVQSYIPTGLIVAISWVSFFIDRRAVPARVTLSFTTLVSLTTLVRLSDCAPLDPRRLLQGNGLRYDLPQVSYAKAIDLWYGACLIFVFLALIEFAVVNSFMRTSEKFSRSALR---I----DKLSRVLFPGTFIAFNIMYWSYY----KSQ------- G0MIA2/235-332_407-447 SRSIGYNLVQSYIPTGLIVMISWVSFWIDRRAVPARVTLSFTTLVSLTTL----------------GNGLRFGLPQVSYAKAIDLWYGACMFFVFCALLEFATINSYMRKSEKFSRHALKIDKA-------CRYLFPFAFFMWNVFYWWYYLVYTKTPVDK---S E3M2Y0/253-381 SRSIGYNLVQSYIPTGLIVMISWVSFWIDRRAVPARVTLSFTTLVSLTTL----------------GNGLRFGLPQVSYAKAIDLWYGACMFFVFCALLEFATINSYMRKSEKFDSMAKKMQSV----VLTGRTRD--------------YLV--RGIKESMRIA A0A2H2ILZ5/80-207 -RSIGYNLVQSYIPTGLIVMISWVSFWIDRRAVPARVTLSFTTLVSLTTL----------------GNGLRFGLPQVSYAKAIDLWYGACMFFVFCALLEFATINSYMRKSEKFDSMAKKMQSV----IVTGRTRD--------------YLV--RSIKESMRIA A8XQH2/239-353 SRSIGYNLVQSYIPTGLIVMISWVSFWIDRRAVPARVTLSFTTLVSLTTL----------------GNGLRFGLPQVSYAKAIDLWYGACMFFVFCALLEFATINSYMRKSEKFDSMAKKIQSV----VLTGRTR------------------------------ A0A2G5SQ20/242-356 ---IGYNLVQSYIPTGLIVMISWVSFWIDRRAVPARVTLSFTTLVSLTTL----------------GNGLRFGLPQVSYAKAIDLWYGACMFFVFCALLEFATINSYMRKSEKFDSMAKKMQSV----VLTGR----------------------RLKTE----- H3FQI6/109-233 -RSIGYNLVQSYIPTGLIVMISWVSFWIDRRAVPARVTLSFTTLVSLTTL----------------GNGLRFGLPQVSYAKAIDLWYGACMFFVFCALLEFALINSHMRKSEKYDHISKTFATSPRYKSLMEKYAAPSSF-------------------DK---- A0A2A6CFE0/258-381 SRSIGYNLVQSYIPTGLIVMISWVSFWIDRRAVPARVTLSFTTLVSLTTL----------------GNGLRFGLPQVSYAKAIDLWYGACMFFVFCALLEFALINSHMRKSEKYDHISKTFATSPRYKSLMEKYAAPSSF------------------------- A0A260Z5N9/241-353 ---IGYNLVQSYIPTGLIVMISWVSFWIDRRAVPARVTLSFTTLVSLTTL----------------GNGLRFGLPQVSYAKAIDLWYGACMFFVFCALLEFATINSYMRKSEKFDSMAKKMQSV----VLTGR----------------------RGA------- A8XLF4/198-298_346-379 KRAIGFHLVQSYIPTALIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQ----------------GNGIRYALPAVSYAKAIDYFYGVCMLFIFGVLLEFAMVNSYMRRANKYNHMSRKALSI----DKAARFAFPCVFAIFNVFYWMYYL---REP------- E3MIL1/198-298_346-379 KRAIGFHLVQSYIPTALIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQ----------------GNGIRYALPAVSYAKAIDYFYGVCMLFIFGVLLEFAMVNSYMRRANKYNHMSRKALSI----DKAARFAFPCVFAIFNVCYWMYYL---REP------- G0P726/198-298_346-379 KRAIGFHLVQSYIPTALIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQ----------------GNGIRYALPAVSYAKAIDYFYGVCMLFIFGVLLEFAMVNSYMRRANKYNHMSRKALSI----DKAARFAFPCVFAIFNVFYWMYYL---REP------- A0A2G5UNV8/228-328_376-409 KRAIGFHLVQSYIPTALIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQ----------------GNGIRYALPAVSYAKAIDYFYGVCMLFIFGVLLEFAMVNSYMRRANKYNHMSRKALSI----DKAARFAFPCVFAIFNVFYWMYYL---REP------- G0P3L1/198-268_302-331_379-412 KRAIGFHLVQSYIPTALIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQ----------------GNGIRYALPAVSYAKAIDYFYPVCMLFIFGVLLEFAMVNSYMRRANKYNHMSRKALSI----DKAARFAFPCVFAIFNVFYWMYYL---REP------- A0A2G5UMW4/175-275_323-356 KRAIGFHLVQSYIPTALIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQ----------------GNGIRYALPAVSYAKAIDYFYGVCMLFIFGVLLEFAMVNSYMRRANKYNHMSRKALSI----DKAARFAFPCVFAIFNVFYWMYYL---REP------- A0A016UI76/263-363_412-448 KRAIGFHLVQSYIPTGLIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQ----------------GNGIRYALPPVSYAKAIDYFYGVCMLFIFGVLLEFAMVNSYMRRANKYNHMSRRALAI----DKAARFAFPSVFMLFNLVYWMYYM---REPED----Q A0A016UHE6/230-330_379-415 KRAIGFHLVQSYIPTGLIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQ----------------GNGIRYALPPVSYAKAIDYFYGVCMLFIFGVLLEFAMVNSYMRRANKYNHMSRRALAI----DKAARFAFPSVFMLFNLVYWMYYM---REPED----Q A0A2G5UN02/195-294_342-375 -RAIGFHLVQSYIPTALIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQ----------------GNGIRYALPAVSYAKAIDYFYGVCMLFIFGVLLEFAMVNSYMRRANKYNHMSRKALSI----DKAARFAFPCVFAIFNVFYWMYYL---REP------- A0A016UG64/275-375_424-460 KRAIGFHLVQSYIPTGLIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQ----------------GNGIRYALPPVSYAKAIDYFYGVCMLFIFGVLLEFAMVNSYMRRANKYNHMSRRALAI----DKAARFAFPSVFMLFNLVYWMYYM---REPED----Q #=GC scorecons 274897699999999699959999998999999999969999996696950000000000000000999697599599999999559869869794698999479979966697556656334500003344833342241122212212430005330100000 #=GC scorecons_70 _*_***_************_*****************_*******_*_*_________________******_**_********__**_**_***__*****_*******__**_____*____________*________________________________ #=GC scorecons_80 _*_***_********_***_*****************_******__*_*_________________***_**_**_********__**_**_*_*__*****__*****___**__________________*________________________________ #=GC scorecons_90 ___**__********_***_*****************_******__*_*_________________***_*__**_********__**_**_*_*__*****__**_**___*___________________*________________________________ //