# STOCKHOLM 1.0 #=GF ID 1.20.58.390/FF/000062 #=GF DE Neurotransmitter-gated ion-channel transmembrane region #=GF AC 1.20.58.390/FF/000062 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 31.772 #=GS E9P890/1-118 AC E9P890 #=GS E9P890/1-118 OS Caenorhabditis elegans #=GS E9P890/1-118 DE Ligand-Gated ion Channel #=GS E9P890/1-118 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A0K0JAF5/238-357 AC A0A0K0JAF5 #=GS A0A0K0JAF5/238-357 OS Brugia malayi #=GS A0A0K0JAF5/238-357 DE Uncharacterized protein #=GS A0A0K0JAF5/238-357 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Brugia; Brugia malayi; #=GS A0A016U091/148-266 AC A0A016U091 #=GS A0A016U091/148-266 OS Ancylostoma ceylanicum #=GS A0A016U091/148-266 DE Uncharacterized protein #=GS A0A016U091/148-266 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GS A0A0N4WSP6/122-241 AC A0A0N4WSP6 #=GS A0A0N4WSP6/122-241 OS Haemonchus placei #=GS A0A0N4WSP6/122-241 DE Uncharacterized protein #=GS A0A0N4WSP6/122-241 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Trichostrongyloidea; Haemonchidae; Haemonchus; Haemonchus placei; #=GS A0A090MUJ1/82-197 AC A0A090MUJ1 #=GS A0A090MUJ1/82-197 OS Strongyloides ratti #=GS A0A090MUJ1/82-197 DE Neurotransmitter-gated ion-channel transmembrane domain and Neurotransmitter-gated ion-channel ligand-binding domain and Nicotinic acetylcholine-gated receptor, transmembrane domain-containing protein #=GS A0A090MUJ1/82-197 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides; Strongyloides ratti; #=GS A0A158PJV6/168-286 AC A0A158PJV6 #=GS A0A158PJV6/168-286 OS Angiostrongylus costaricensis #=GS A0A158PJV6/168-286 DE Uncharacterized protein #=GS A0A158PJV6/168-286 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Metastrongyloidea; Angiostrongylidae; Angiostrongylus; Angiostrongylus costaricensis; #=GS A0A0B2W0V6/162-278 AC A0A0B2W0V6 #=GS A0A0B2W0V6/162-278 OS Toxocara canis #=GS A0A0B2W0V6/162-278 DE Acetylcholine receptor subunit alpha-type des-2 #=GS A0A0B2W0V6/162-278 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Ascaridomorpha; Ascaridoidea; Toxocaridae; Toxocara; Toxocara canis; #=GS A0A0N4VLT2/121-240 AC A0A0N4VLT2 #=GS A0A0N4VLT2/121-240 OS Enterobius vermicularis #=GS A0A0N4VLT2/121-240 DE Uncharacterized protein #=GS A0A0N4VLT2/121-240 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Oxyuridomorpha; Oxyuroidea; Oxyuridae; Enterobius; Enterobius vermicularis; #=GS H3ES33/110-228 AC H3ES33 #=GS H3ES33/110-228 OS Pristionchus pacificus #=GS H3ES33/110-228 DE Uncharacterized protein #=GS H3ES33/110-228 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS W2TZL6/121-240 AC W2TZL6 #=GS W2TZL6/121-240 OS Necator americanus #=GS W2TZL6/121-240 DE Neurotransmitter-gated ion-channel transmembrane region #=GS W2TZL6/121-240 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Bunostominae; Necator; Necator americanus; #=GS A0A0N5D4N6/170-289 AC A0A0N5D4N6 #=GS A0A0N5D4N6/170-289 OS Thelazia callipaeda #=GS A0A0N5D4N6/170-289 DE Uncharacterized protein #=GS A0A0N5D4N6/170-289 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Thelazioidea; Thelaziidae; Thelazia; Thelazia callipaeda; #=GS A0A1I8AAS0/191-304 AC A0A1I8AAS0 #=GS A0A1I8AAS0/191-304 OS Steinernema glaseri #=GS A0A1I8AAS0/191-304 DE Uncharacterized protein #=GS A0A1I8AAS0/191-304 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Steinernematidae; Steinernema; Steinernema glaseri; #=GS A0A0C2GZJ1/89-208 AC A0A0C2GZJ1 #=GS A0A0C2GZJ1/89-208 OS Ancylostoma duodenale #=GS A0A0C2GZJ1/89-208 DE Uncharacterized protein #=GS A0A0C2GZJ1/89-208 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma duodenale; #=GS A0A0N4Z6V6/150-263 AC A0A0N4Z6V6 #=GS A0A0N4Z6V6/150-263 OS Parastrongyloides trichosuri #=GS A0A0N4Z6V6/150-263 DE Uncharacterized protein #=GS A0A0N4Z6V6/150-263 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Parastrongyloides; Parastrongyloides trichosuri; #=GS A0A0N5AYV8/159-274 AC A0A0N5AYV8 #=GS A0A0N5AYV8/159-274 OS Syphacia muris #=GS A0A0N5AYV8/159-274 DE Uncharacterized protein #=GS A0A0N5AYV8/159-274 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Oxyuridomorpha; Oxyuroidea; Oxyuridae; Syphacia; Syphacia muris; #=GS A0A0N5B6T9/90-206 AC A0A0N5B6T9 #=GS A0A0N5B6T9/90-206 OS Strongyloides papillosus #=GS A0A0N5B6T9/90-206 DE Uncharacterized protein #=GS A0A0N5B6T9/90-206 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides; Strongyloides papillosus; #=GS A0A0K0EW08/158-271 AC A0A0K0EW08 #=GS A0A0K0EW08/158-271 OS Strongyloides venezuelensis #=GS A0A0K0EW08/158-271 DE Uncharacterized protein #=GS A0A0K0EW08/158-271 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides; Strongyloides venezuelensis; #=GS A0A0K0ET78/140-253 AC A0A0K0ET78 #=GS A0A0K0ET78/140-253 OS Strongyloides stercoralis #=GS A0A0K0ET78/140-253 DE Uncharacterized protein #=GS A0A0K0ET78/140-253 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides; Strongyloides stercoralis; #=GS A8XTM8/195-316 AC A8XTM8 #=GS A8XTM8/195-316 OS Caenorhabditis briggsae #=GS A8XTM8/195-316 DE Protein CBR-LGC-31 #=GS A8XTM8/195-316 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A1I7UEW0/116-237 AC A0A1I7UEW0 #=GS A0A1I7UEW0/116-237 OS Caenorhabditis tropicalis #=GS A0A1I7UEW0/116-237 DE Uncharacterized protein #=GS A0A1I7UEW0/116-237 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; #=GS A0A2G5SIB0/112-233 AC A0A2G5SIB0 #=GS A0A2G5SIB0/112-233 OS Caenorhabditis nigoni #=GS A0A2G5SIB0/112-233 DE Uncharacterized protein #=GS A0A2G5SIB0/112-233 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS G0NQB5/156-277 AC G0NQB5 #=GS G0NQB5/156-277 OS Caenorhabditis brenneri #=GS G0NQB5/156-277 DE CBN-LGC-31 protein #=GS G0NQB5/156-277 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS K7H2Q6/151-272 AC K7H2Q6 #=GS K7H2Q6/151-272 OS Caenorhabditis japonica #=GS K7H2Q6/151-272 DE Uncharacterized protein #=GS K7H2Q6/151-272 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; #=GS A0A260Z399/316-432 AC A0A260Z399 #=GS A0A260Z399/316-432 OS Caenorhabditis remanei #=GS A0A260Z399/316-432 DE Uncharacterized protein #=GS A0A260Z399/316-432 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A0A2G5SI39/108-229 AC A0A2G5SI39 #=GS A0A2G5SI39/108-229 OS Caenorhabditis nigoni #=GS A0A2G5SI39/108-229 DE Uncharacterized protein #=GS A0A2G5SI39/108-229 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A1I7UEW1/116-237 AC A0A1I7UEW1 #=GS A0A1I7UEW1/116-237 OS Caenorhabditis tropicalis #=GS A0A1I7UEW1/116-237 DE Uncharacterized protein #=GS A0A1I7UEW1/116-237 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; #=GS A0A016TZP8/148-266 AC A0A016TZP8 #=GS A0A016TZP8/148-266 OS Ancylostoma ceylanicum #=GS A0A016TZP8/148-266 DE Uncharacterized protein #=GS A0A016TZP8/148-266 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GS A0A016TZK9/148-266 AC A0A016TZK9 #=GS A0A016TZK9/148-266 OS Ancylostoma ceylanicum #=GS A0A016TZK9/148-266 DE Uncharacterized protein #=GS A0A016TZK9/148-266 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GS A0A2A6CQX0/353-471 AC A0A2A6CQX0 #=GS A0A2A6CQX0/353-471 OS Pristionchus pacificus #=GS A0A2A6CQX0/353-471 DE Lgc-31 #=GS A0A2A6CQX0/353-471 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GF SQ 29 E9P890/1-118 ----MIIITLVMKRQSFYY--VFNLVIPSTMITLVSVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMGTNRRGRGSFSGIPLIGLYYFILLAIIGMSTVTTSMFVYLERES A0A0K0JAF5/238-357 LFWEMIIMDLVLIRQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGKMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSSSRKGRGSFSGIPLIGLYYFILLAIIGSSTVTTSMFVFLEK-- A0A016U091/148-266 -FWEMIIIDLVVERQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSTNRKGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A0A0N4WSP6/122-241 LFWEMIIIDLVVERQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSANRKGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A0A090MUJ1/82-197 ----MIIIDLVVSRQSFYY--VFNLVIPSTIITFVAVIGFHTPSTSGRVRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSSTRKGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A0A158PJV6/168-286 ---EMIIIDLVVERQSFYYGKFFNLVIPSTIITLVAVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSSNRRGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A0A0B2W0V6/162-278 ---EMVIMDLVVVRQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGRVRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSSSRRGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A0A0N4VLT2/121-240 LYWDMIIMDVVVARQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGKMRDAKYRLGIMTLMSMSVILLAIVEDMPKFSMSSTRRGRGSFSGIPLIGLYYFILLAVIGLSTVTTSMFVFLER-- H3ES33/110-228 -FWEMIIMDLVVVRQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGRVRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMWSSRRGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- W2TZL6/121-240 LFWEMIIIDLVVERQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSTNRKGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A0A0N5D4N6/170-289 LFWEMIIMDLVLVRQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGKMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSSSRRGRGSFSGIPLIGLYYFILLAIIGSSTVTTSMFIFLEK-- A0A1I8AAS0/191-304 -----VIMDLVVVRQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGRVRDAKFRLGIMTLMSMSVILLAIVEDMPKFSM-SSRRGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A0A0C2GZJ1/89-208 LFWEMIIIDLVVERQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSTNRKGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A0A0N4Z6V6/150-263 ------IIDLVVSRQSFYY--VFNLVIPSTIITFVAVIGFHTPSTSGRVRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSSTRKGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A0A0N5AYV8/159-274 ----MIIMDVVVARQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGRMRDAKYRLGIMTLMSMSVILLAIVEDMPKFSMSSSRRGRGSFSGIPLIGLYYFILLAVIGLSTVTTSMFVFLER-- A0A0N5B6T9/90-206 ---DMVIIDLVVSRQSFYY--VFNLVIPSTIITFVAVIGFHTPSTSGRVRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSSTRKGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A0A0K0EW08/158-271 ------IIDLVVSRQSFYY--VFNLVIPSTIITFVAVIGFHTPSTSGRVRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSSTRKGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A0A0K0ET78/140-253 ------IIDLVVSRQSFYY--VFNLVIPSTIITFVAVIGFHTPSTSGRVRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSSTRKGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A8XTM8/195-316 LFWEMIIITLVMKRQSFYY--VFNLVIPSTMITLVSVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMGTNRRGRGSFSGIPLIGLYYFILLAIIGMSTVTTSMFVYLERES A0A1I7UEW0/116-237 LFWEMIIITLVMKRQSFYY--VFNLVIPSTMITLVSVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMGTNRRGRGSFSGIPLIGLYYFILLAIIGMSTVTTSMFVYLERES A0A2G5SIB0/112-233 LFWEMIIITLVMKRQSFYY--VFNLVIPSTMITLVSVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMGTNRRGRGSFSGIPLIGLYYFILLAIIGMSTVTTSMFVYLERES G0NQB5/156-277 LFWEMIIITLVMKRQSFYY--VFNLVIPSTMITLVSVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMGTNRRGRGSFSGIPLIGLYYFILLAIIGMSTVTTSMFVYLERES K7H2Q6/151-272 LFWEMIIITLVVKRQSFYY--VFNLVIPSTMITLVSVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMGANRRGRGSFSGIPLIGLYYFILLAIIGMSTVTTSMFVFLERES A0A260Z399/316-432 -FWEMIIITLVMKRQ------MFNLVIPSTMITLVSVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMGTNRRGRGSFSGIPLIGLYYFILLAIIGMSTVTTSMFVYLERES A0A2G5SI39/108-229 LFWEMIIITLVMKRQSFYY--VFNLVIPSTMITLVSVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMGTNRRGRGSFSGIPLIGLYYFILLAIIGMSTVTTSMFVYLERES A0A1I7UEW1/116-237 LFWEMIIITLVMKRQSFYY--VFNLVIPSTMITLVSVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMGTNRRGRGSFSGIPLIGLYYFILLAIIGMSTVTTSMFVYLERES A0A016TZP8/148-266 -FWEMIIIDLVVERQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSTNRKGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A0A016TZK9/148-266 -FWEMIIIDLVVERQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGRMRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMSTNRKGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- A0A2A6CQX0/353-471 -FWEMIIMDLVVVRQSFYY--VFNLVIPSTIITLVAVIGFHTPSTSGRVRDAKFRLGIMTLMSMSVILLAIVEDMPKFSMWSSRRGRGSFSGIPLIGLYYFILLAIIGLSTVTTSMFVFLER-- #=GC scorecons 1334669758963998888008999999997997969999999999986999989999999999999999999999999955597999999999999999999998996999999998799800 #=GC scorecons_70 ______**_***_******__***********************************************************___***************************************__ #=GC scorecons_80 ______**_**__******__*********_****_************_*******************************___*************************_*************__ #=GC scorecons_90 ______*__**__**_______********_**_*_************_*******************************___*_***********************_*********_***__ //