# STOCKHOLM 1.0
#=GF ID 1.20.272.10/FF/000030
#=GF DE Replication factor C subunit 1
#=GF AC 1.20.272.10/FF/000030
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 87.281
#=GS Q385K3/246-350      AC Q385K3
#=GS Q385K3/246-350      OS Trypanosoma brucei brucei TREU927
#=GS Q385K3/246-350      DE Replication factor C, subunit 1, putative
#=GS Q385K3/246-350      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q385K3/246-350      DR GO; GO:0003677; GO:0005524; GO:0005634; GO:0005654; GO:0005663; GO:0006260; 
#=GS Q4QAN4/262-366      AC Q4QAN4
#=GS Q4QAN4/262-366      OS Leishmania major
#=GS Q4QAN4/262-366      DE Putative replication factor C, subunit 1
#=GS Q4QAN4/262-366      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4QAN4/262-366      DR GO; GO:0005654; 
#=GS A2DH92/403-499      AC A2DH92
#=GS A2DH92/403-499      OS Trichomonas vaginalis
#=GS A2DH92/403-499      DE Transcription factor, putative
#=GS A2DH92/403-499      DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS B8C9T1/897-1013     AC B8C9T1
#=GS B8C9T1/897-1013     OS Thalassiosira pseudonana
#=GS B8C9T1/897-1013     DE Replication factor C subunit 1
#=GS B8C9T1/897-1013     DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS A4HDF5/260-367      AC A4HDF5
#=GS A4HDF5/260-367      OS Leishmania braziliensis
#=GS A4HDF5/260-367      DE Putative replication factor C, subunit 1
#=GS A4HDF5/260-367      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS A0A1G4I3H1/246-350  AC A0A1G4I3H1
#=GS A0A1G4I3H1/246-350  OS Trypanosoma equiperdum
#=GS A0A1G4I3H1/246-350  DE Replication factor C, subunit 1, putative
#=GS A0A1G4I3H1/246-350  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS A4I0T7/259-366      AC A4I0T7
#=GS A4I0T7/259-366      OS Leishmania infantum
#=GS A4I0T7/259-366      DE Putative replication factor C, subunit 1
#=GS A4I0T7/259-366      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS A0A088RS77/260-367  AC A0A088RS77
#=GS A0A088RS77/260-367  OS Leishmania panamensis
#=GS A0A088RS77/260-367  DE Replication factor C, subunit 1, putative
#=GS A0A088RS77/260-367  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; 
#=GS E9AWU0/259-366      AC E9AWU0
#=GS E9AWU0/259-366      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AWU0/259-366      DE Putative replication factor C, subunit 1
#=GS E9AWU0/259-366      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS D0A768/246-350      AC D0A768
#=GS D0A768/246-350      OS Trypanosoma brucei gambiense DAL972
#=GS D0A768/246-350      DE Replication factor C, subunit 1, putative
#=GS D0A768/246-350      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei gambiense; 
#=GS A0A3L6KU58/246-350  AC A0A3L6KU58
#=GS A0A3L6KU58/246-350  OS Trypanosoma brucei equiperdum
#=GS A0A3L6KU58/246-350  DE Replication factor C
#=GS A0A3L6KU58/246-350  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei equiperdum; 
#=GS E9BGW4/259-366      AC E9BGW4
#=GS E9BGW4/259-366      OS Leishmania donovani BPK282A1
#=GS E9BGW4/259-366      DE Replication factor C, subunit 1, putative
#=GS E9BGW4/259-366      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS A0A1E1IXF7/260-367  AC A0A1E1IXF7
#=GS A0A1E1IXF7/260-367  OS Leishmania guyanensis
#=GS A0A1E1IXF7/260-367  DE Replication factor C, subunit 1, putative
#=GS A0A1E1IXF7/260-367  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania guyanensis; 
#=GF SQ 13
Q385K3/246-350              FEAAEVFLLQGSS-------RGRPRSIEELQSTFYNSDLVDMFVQENYLH-----FKPE----DRDW----MDAVAEAASSIS-LSDLAQRIMFFENNWSVSRSHVLLSSIIPCALTRGHYETFVT
Q4QAN4/262-366              ---AEYFLLQGTS-------RGERHSMAEMQACYYNADLVDMFVQENYLH-----YNPQPV-DGRDW----MEAVSQAATSIS-RSDAAQSIMYYQQNWSVSRFHVLSSSIAPCVYTRGKYETFMT
A2DH92/403-499              VDGTRFILSMHTS-------------FEDKFNCAFADDAMPLYVQYN-LH------APQ---GNRES----ALDYADALDATC-FGEIVERELKETQNYSLSTPSNYLSCVLPTMISKNKMEPKL-
B8C9T1/897-1013             FDATK-LIVEGPRDTGSDAKKNNDSFFKRTDAFFVDYMLMGLNIHQNYLKVCVGQYNNAKTRGDDDLELAALDAVHDATLAMSDFGIVEENLRGGDQNWALLPLCSVLAAKVGFHAGG--------
A4HDF5/260-367              FDAAEYFLLQGTS-------RGERHSIAEMQARYYNADLVDMFVQENYLH-----YNPQLV-DGRDW----MEAVSQAATSIS-RADAAQRIMYYEQNWSVSRFHVLSSSIAPCVYTRGKYETFMT
A0A1G4I3H1/246-350          FEAAEVFLLQGSS-------RGRPRSIEELQSTFYNSDLVDMFVQENYLH-----FKPE----DRDW----MDAVAEAASSIS-LSDLAQRIMFFENNWSVSRSHVLLSSIIPCALTRGHYETFVT
A4I0T7/259-366              FDAAEYFLLQGTS-------RGERHSIAEMQACYYNADLVDMFVQENYLH-----YNPQPV-DGRDW----MEAVSQAATSIS-RSDAAQSIMYYQQNWSVSRFHVLSSSIAPCVYTRGKYETFMT
A0A088RS77/260-367          FDAAEYFLLQGTS-------RGERHSIAEMQARYYNADLVDMFVQENYLH-----YNPQLV-DGRDW----MEAVSQAATSIS-RADAAQRIMYYEQNWSVSRFHVLSSSIAPCVYTRGKYETFMT
E9AWU0/259-366              FDAAEYFLLQGTS-------RGERHSIVEMQACYYNADLVDMFVQENYLH-----YNPQPV-DGRDW----MEAVSQAATSIS-RSDAAQRIMYYQQNWSVSRFHVLSSSIAPCVYTRGKYETFMT
D0A768/246-350              FEAAEVFLLQGSS-------RGRPRSIEELQSTFYNSDLVDMFVQENYLH-----FKPE----DRDW----MDAVAEAASSIS-LSDLAQRIMFFENNWSVSRSHVLLSSIIPCALTRGHYETFVT
A0A3L6KU58/246-350          FEAAEVFLLQGSS-------RGRPRSIEELQSTFYNSDLVDMFVQENYLH-----FKPE----DRDW----MDAVAEAASSIS-LSDLAQRIMFFENNWSVSRSHVLLSSIIPCALTRGHYETFVT
E9BGW4/259-366              FDAAEYFLLQGTS-------RGERHSIAEMQACYYNADLVDMFVQENYLH-----YNPQPV-DGRDW----MEAVSQAATSIS-RSDAAQSIMYYQQNWSVSRFHVLSSSIAPCVYTRGKYETFMT
A0A1E1IXF7/260-367          FDAAEYFLLQGTS-------RGERHSIAEMQARYYNADLVDMFVQENYLH-----YNPQLV-DGRDW----MEAVSQAATSIS-RADAAQRIMYYEQNWSVSRFHVLSSSIAPCVYTRGKYETFMT
#=GC scorecons              666653575565600000005432345464453555366656577596970000055651102567400005566459536670355456555334697766535555755465335644454333
#=GC scorecons_70           _***___*__*_*________________________***_*_**_*_**_______*______**_______**__*____*______*______******______*___*_____________
#=GC scorecons_80           _______*___________________________________**_*_*________________*___________*____*______________*____________________________
#=GC scorecons_90           ______________________________________________*_*____________________________*___________________*____________________________
//