# STOCKHOLM 1.0 #=GF ID 1.20.272.10/FF/000029 #=GF DE Replication factor C small subunit #=GF AC 1.20.272.10/FF/000029 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 96.791 #=GS 2chvF03/226-319 AC O28219 #=GS 2chvF03/226-319 OS Archaeoglobus fulgidus DSM 4304 #=GS 2chvF03/226-319 DE Replication factor C small subunit #=GS 2chvF03/226-319 DR CATH; 2chv; F:226-319; #=GS 2chvF03/226-319 DR ORG; Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus; Archaeoglobus fulgidus; #=GS 2chvE03/226-319 AC O28219 #=GS 2chvE03/226-319 OS Archaeoglobus fulgidus DSM 4304 #=GS 2chvE03/226-319 DE Replication factor C small subunit #=GS 2chvE03/226-319 DR CATH; 2chv; E:226-319; #=GS 2chvE03/226-319 DR ORG; Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus; Archaeoglobus fulgidus; #=GS 2chvD03/226-319 AC O28219 #=GS 2chvD03/226-319 OS Archaeoglobus fulgidus DSM 4304 #=GS 2chvD03/226-319 DE Replication factor C small subunit #=GS 2chvD03/226-319 DR CATH; 2chv; D:226-319; #=GS 2chvD03/226-319 DR ORG; Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus; Archaeoglobus fulgidus; #=GS 2chvC03/226-319 AC O28219 #=GS 2chvC03/226-319 OS Archaeoglobus fulgidus DSM 4304 #=GS 2chvC03/226-319 DE Replication factor C small subunit #=GS 2chvC03/226-319 DR CATH; 2chv; C:226-319; #=GS 2chvC03/226-319 DR ORG; Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus; Archaeoglobus fulgidus; #=GS 2chvB03/226-319 AC O28219 #=GS 2chvB03/226-319 OS Archaeoglobus fulgidus DSM 4304 #=GS 2chvB03/226-319 DE Replication factor C small subunit #=GS 2chvB03/226-319 DR CATH; 2chv; B:226-319; #=GS 2chvB03/226-319 DR ORG; Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus; Archaeoglobus fulgidus; #=GS 2chvA03/226-319 AC O28219 #=GS 2chvA03/226-319 OS Archaeoglobus fulgidus DSM 4304 #=GS 2chvA03/226-319 DE Replication factor C small subunit #=GS 2chvA03/226-319 DR CATH; 2chv; A:226-319; #=GS 2chvA03/226-319 DR ORG; Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus; Archaeoglobus fulgidus; #=GS 2chqC03/226-319 AC O28219 #=GS 2chqC03/226-319 OS Archaeoglobus fulgidus DSM 4304 #=GS 2chqC03/226-319 DE Replication factor C small subunit #=GS 2chqC03/226-319 DR CATH; 2chq; C:226-319; #=GS 2chqC03/226-319 DR ORG; Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus; Archaeoglobus fulgidus; #=GS 2chqB03/226-319 AC O28219 #=GS 2chqB03/226-319 OS Archaeoglobus fulgidus DSM 4304 #=GS 2chqB03/226-319 DE Replication factor C small subunit #=GS 2chqB03/226-319 DR CATH; 2chq; B:226-319; #=GS 2chqB03/226-319 DR ORG; Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus; Archaeoglobus fulgidus; #=GS 2chqA03/226-319 AC O28219 #=GS 2chqA03/226-319 OS Archaeoglobus fulgidus DSM 4304 #=GS 2chqA03/226-319 DE Replication factor C small subunit #=GS 2chqA03/226-319 DR CATH; 2chq; A:226-319; #=GS 2chqA03/226-319 DR ORG; Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus; Archaeoglobus fulgidus; #=GS B1L5M9/228-321 AC B1L5M9 #=GS B1L5M9/228-321 OS Candidatus Korarchaeum cryptofilum OPF8 #=GS B1L5M9/228-321 DE Replication factor C small subunit #=GS B1L5M9/228-321 DR ORG; Archaea; Candidatus Korarchaeota; Candidatus Korarchaeum; Candidatus Korarchaeum cryptofilum; #=GS Q8ZYK4/225-318 AC Q8ZYK4 #=GS Q8ZYK4/225-318 OS Pyrobaculum aerophilum str. IM2 #=GS Q8ZYK4/225-318 DE Replication factor C small subunit 1 #=GS Q8ZYK4/225-318 DR ORG; Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum aerophilum; #=GS Q8TSX5/238-337 AC Q8TSX5 #=GS Q8TSX5/238-337 OS Methanosarcina acetivorans C2A #=GS Q8TSX5/238-337 DE Replication factor C small subunit #=GS Q8TSX5/238-337 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina acetivorans; #=GS B0R7H7/231-321 AC B0R7H7 #=GS B0R7H7/231-321 OS Halobacterium salinarum R1 #=GS B0R7H7/231-321 DE Replication factor C small subunit #=GS B0R7H7/231-321 DR ORG; Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium; Halobacterium salinarum; #=GS Q9UXF5/228-323 AC Q9UXF5 #=GS Q9UXF5/228-323 OS Saccharolobus solfataricus P2 #=GS Q9UXF5/228-323 DE Replication factor C small subunit #=GS Q9UXF5/228-323 DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; #=GS 1iqpF03/234-327 AC Q8U4J3 #=GS 1iqpF03/234-327 OS Pyrococcus furiosus DSM 3638 #=GS 1iqpF03/234-327 DE Replication factor C small subunit #=GS 1iqpF03/234-327 DR CATH; 1iqp; F:234-327; #=GS 1iqpF03/234-327 DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus; Pyrococcus furiosus; #=GS 1iqpE03/234-327 AC Q8U4J3 #=GS 1iqpE03/234-327 OS Pyrococcus furiosus DSM 3638 #=GS 1iqpE03/234-327 DE Replication factor C small subunit #=GS 1iqpE03/234-327 DR CATH; 1iqp; E:234-327; #=GS 1iqpE03/234-327 DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus; Pyrococcus furiosus; #=GS 1iqpD03/234-327 AC Q8U4J3 #=GS 1iqpD03/234-327 OS Pyrococcus furiosus DSM 3638 #=GS 1iqpD03/234-327 DE Replication factor C small subunit #=GS 1iqpD03/234-327 DR CATH; 1iqp; D:234-327; #=GS 1iqpD03/234-327 DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus; Pyrococcus furiosus; #=GS 1iqpC03/234-327 AC Q8U4J3 #=GS 1iqpC03/234-327 OS Pyrococcus furiosus DSM 3638 #=GS 1iqpC03/234-327 DE Replication factor C small subunit #=GS 1iqpC03/234-327 DR CATH; 1iqp; C:234-327; #=GS 1iqpC03/234-327 DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus; Pyrococcus furiosus; #=GS 1iqpB03/234-327 AC Q8U4J3 #=GS 1iqpB03/234-327 OS Pyrococcus furiosus DSM 3638 #=GS 1iqpB03/234-327 DE Replication factor C small subunit #=GS 1iqpB03/234-327 DR CATH; 1iqp; B:234-327; #=GS 1iqpB03/234-327 DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus; Pyrococcus furiosus; #=GS 1iqpA03/234-327 AC Q8U4J3 #=GS 1iqpA03/234-327 OS Pyrococcus furiosus DSM 3638 #=GS 1iqpA03/234-327 DE Replication factor C small subunit #=GS 1iqpA03/234-327 DR CATH; 1iqp; A:234-327; #=GS 1iqpA03/234-327 DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus; Pyrococcus furiosus; #=GS A0CAF3/246-339 AC A0CAF3 #=GS A0CAF3/246-339 OS Paramecium tetraurelia #=GS A0CAF3/246-339 DE Uncharacterized protein #=GS A0CAF3/246-339 DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; #=GS H3EQV6/74-157 AC H3EQV6 #=GS H3EQV6/74-157 OS Pristionchus pacificus #=GS H3EQV6/74-157 DE Uncharacterized protein #=GS H3EQV6/74-157 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS Q8PVY4/238-337 AC Q8PVY4 #=GS Q8PVY4/238-337 OS Methanosarcina mazei Go1 #=GS Q8PVY4/238-337 DE Replication factor C small subunit #=GS Q8PVY4/238-337 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina mazei; #=GS A0A0E3NKI3/234-332 AC A0A0E3NKI3 #=GS A0A0E3NKI3/234-332 OS Methanosarcina sp. WWM596 #=GS A0A0E3NKI3/234-332 DE Replication factor C small subunit #=GS A0A0E3NKI3/234-332 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina sp. WWM596; #=GS A0A0E3L407/234-332 AC A0A0E3L407 #=GS A0A0E3L407/234-332 OS Methanosarcina sp. WH1 #=GS A0A0E3L407/234-332 DE Replication factor C small subunit #=GS A0A0E3L407/234-332 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina sp. WH1; #=GS W0JZ50/231-322 AC W0JZ50 #=GS W0JZ50/231-322 OS Halobacterium sp. DL1 #=GS W0JZ50/231-322 DE Replication factor C small subunit #=GS W0JZ50/231-322 DR ORG; Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium; Halobacterium sp. DL1; #=GS A0A3R9PEX8/228-321 AC A0A3R9PEX8 #=GS A0A3R9PEX8/228-321 OS Candidatus Korarchaeum cryptofilum #=GS A0A3R9PEX8/228-321 DE Replication factor C small subunit #=GS A0A3R9PEX8/228-321 DR ORG; Archaea; Candidatus Korarchaeota; Candidatus Korarchaeum; Candidatus Korarchaeum cryptofilum; #=GS Q9HN27/231-321 AC Q9HN27 #=GS Q9HN27/231-321 OS Halobacterium salinarum NRC-1 #=GS Q9HN27/231-321 DE Replication factor C small subunit #=GS Q9HN27/231-321 DR ORG; Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium; Halobacterium salinarum; #=GS A0A0E3K8E7/228-323 AC A0A0E3K8E7 #=GS A0A0E3K8E7/228-323 OS Saccharolobus solfataricus #=GS A0A0E3K8E7/228-323 DE Replication factor C small subunit #=GS A0A0E3K8E7/228-323 DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; #=GS D0KTH2/228-323 AC D0KTH2 #=GS D0KTH2/228-323 OS Saccharolobus solfataricus 98/2 #=GS D0KTH2/228-323 DE Replication factor C small subunit #=GS D0KTH2/228-323 DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; #=GF SQ 30 2chvF03/226-319 ARPEEMTELIQTAL-KGNFMEARELLDRLMVEYGMSGEDIVAQLFREIIS--------MPI-KDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAKK 2chvE03/226-319 ARPEEMTELIQTAL-KGNFMEARELLDRLMVEYGMSGEDIVAQLFREIIS--------MPI-KDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAKK 2chvD03/226-319 ARPEEMTELIQTAL-KGNFMEARELLDRLMVEYGMSGEDIVAQLFREIIS--------MPI-KDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAKK 2chvC03/226-319 ARPEEMTELIQTAL-KGNFMEARELLDRLMVEYGMSGEDIVAQLFREIIS--------MPI-KDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAKK 2chvB03/226-319 ARPEEMTELIQTAL-KGNFMEARELLDRLMVEYGMSGEDIVAQLFREIIS--------MPI-KDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAKK 2chvA03/226-319 ARPEEMTELIQTAL-KGNFMEARELLDRLMVEYGMSGEDIVAQLFREIIS--------MPI-KDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAKK 2chqC03/226-319 ARPEEMTELIQTAL-KGNFMEARELLDRLMVEYGMSGEDIVAQLFREIIS--------MPI-KDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAKK 2chqB03/226-319 ARPEEMTELIQTAL-KGNFMEARELLDRLMVEYGMSGEDIVAQLFREIIS--------MPI-KDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAKK 2chqA03/226-319 ARPEEMTELIQTAL-KGNFMEARELLDRLMVEYGMSGEDIVAQLFREIIS--------MPI-KDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAKK B1L5M9/228-321 -HPEEVRAMINSAL-KGKFLSAREALRNLMINYGMSAQDVIRQLNREIMAS-------KSL-SDKEKAMLMIFLSEVDFRVTEGAHGDVQLAAMLAKLVEVGES Q8ZYK4/225-318 VRPADIIELFNLAI-SGDFVKAREKLRELMYLKGIAGADFIRAFQRELIR--------MPI-DDDIKAEIAELLADVDYRLTQGADEEIQLTYLLTKLGAIGRR Q8TSX5/238-337 -NPEEIKNLIETAL-RGNFRIARKELNRLLYEEGLSGEDIVGQIYRVVSEMDNLMVLDLGL-TERDIVALVDVIGETDFRLTEGASEKIQLEALLAHFALSRE- B0R7H7/231-321 -RPEEIETMVTEAL-GGDFAAARATLDDLLTNRGLAGGDIIDQVHRSVWE--------FDV-EEAAAVRLLDRLGEADYRIAEGANERVQLEALLASVALNA-- Q9UXF5/228-323 AQPKEVREMINLAL-QGKFTQARDKLRTLLITYGLSGEDIVKQIHREITSS------EIQI-SEELRVLLLDYIGETEFRIIEGADDEIQLSALLAKMAIYGNK 1iqpF03/234-327 ARPEDIREMMLLAL-KGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFN--------LPI-EEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK 1iqpE03/234-327 ARPEDIREMMLLAL-KGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFN--------LPI-EEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK 1iqpD03/234-327 ARPEDIREMMLLAL-KGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFN--------LPI-EEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK 1iqpC03/234-327 ARPEDIREMMLLAL-KGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFN--------LPI-EEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK 1iqpB03/234-327 ARPEDIREMMLLAL-KGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFN--------LPI-EEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK 1iqpA03/234-327 ARPEDIREMMLLAL-KGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFN--------LPI-EEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK A0CAF3/246-339 AHPDLIKQIMEYLMNQSEIQKTYLKIKTILNEQGISLQLLLTELSTQLLG--------LNVLNDKQKCNVIERMAELEYRLSICCNDQVQLLSLIGIFHEVL-- H3EQV6/74-157 --------ALAGAL-DLRASRSEEEVEKEYIEKGYALADIITRLHDLVYQ--------MDI-PSDVTAGLVIALATTEQRLSVGCSDRLQTAGLVSAPWFAS-- Q8PVY4/238-337 -NPEEIKNLIETAL-RGNFRVARKELNRLLYEEGLSGEDIVGQIYRVVSEMDNLMILDLGL-SERDIVGLVDIIGETDFRLTEGASEKIQLEALLAHFALSRE- A0A0E3NKI3/234-332 -NPDEIKNLIETAL-RGNFRIARKELNRLLYEEGLSGEDIVGQIYRVVSEMDNLMVLDLGL-SERDIVALVDIIGEADFRLTEGASEKIQLEALLAHFALSR-- A0A0E3L407/234-332 -NPDEIKNLIETAL-RGNFRIARKELNRLLYEEGLSGEDIVGQIYRVVSEMDNLMVLDLGL-SERDIVALVDIIGEADFRLTEGASEKIQLEALLAHFALSR-- W0JZ50/231-322 -RPEEIEGMVTEAL-DGDFTAARSTLDDLLTNRGLAGGDIIDQIHRSVWS--------FDV-EEEAAVRLLDRLGEADFRIAEGANERVQLEALLASVALRAQ- A0A3R9PEX8/228-321 -HPEEVRAMINSAL-KGKFLSAREALRNLMINYGMSAQDVIRQLNREIMAS-------KSL-SDKEKAMLMIFLSEVDFRVTEGAHGDVQLAAMLAKLVEVGES Q9HN27/231-321 -RPEEIETMVTEAL-GGDFAAARATLDDLLTNRGLAGGDIIDQVHRSVWE--------FDV-EEAAAVRLLDRLGEADYRIAEGANERVQLEALLASVALNA-- A0A0E3K8E7/228-323 AQPKEVREMINLAL-QGKFTQARDKLRTLLITYGLSGEDIVKQIHREITSS------EIQI-SEELRVLLLDYIGETEFRIIEGADDEIQLSALLAKMAIYGNK D0KTH2/228-323 AQPKEVREMINLAL-QGKFTQARDKLRTLLITYGLSGEDIVKQIHREITSS------EIQI-SEELRVLLLDYIGETEFRIIEGADDEIQLSALLAKMAIYGNK #=GC scorecons 25756544663388057573377537446634495765866375565634000000005460463346384636674679657875747984767735443432 #=GC scorecons_70 __*_________**__*_*__**__*__**___*_**_**__*__*_*____________*__*___*_*_*_***_****_***_*_***_*_**________ #=GC scorecons_80 __*_________**__*_*__**__*_______*____*___*__________________________*_____*__**___**____**_*_**________ #=GC scorecons_90 ____________**___________________*____*______________________________*_________*___*_____**_____________ //