# STOCKHOLM 1.0 #=GF ID 1.20.210.10/FF/000009 #=GF DE Cytochrome c oxidase subunit 1 #=GF AC 1.20.210.10/FF/000009 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 46.495 #=GS P29647/1-163 AC P29647 #=GS P29647/1-163 OS Lepisosteus oculatus #=GS P29647/1-163 DE Cytochrome c oxidase subunit 1 #=GS P29647/1-163 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; #=GS P29647/1-163 DR GO; GO:0045277; #=GS P29647/1-163 DR EC; 1.9.3.1; #=GS Q95865/1-189 AC Q95865 #=GS Q95865/1-189 OS Neobatrachus pelobatoides #=GS Q95865/1-189 DE Cytochrome c oxidase subunit 1 #=GS Q95865/1-189 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Neobatrachia; Myobatrachoidea; Myobatrachidae; Limnodynastinae; Neobatrachus; Neobatrachus pelobatoides; #=GS Q95865/1-189 DR GO; GO:0005737; #=GS Q33375/1-196 AC Q33375 #=GS Q33375/1-196 OS Canis simensis #=GS Q33375/1-196 DE Cytochrome c oxidase subunit 1 #=GS Q33375/1-196 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis simensis; #=GS Q33375/1-196 DR GO; GO:0045277; #=GS Q33375/1-196 DR EC; 1.9.3.1; #=GS P29651/1-184 AC P29651 #=GS P29651/1-184 OS Polypterus sp. #=GS P29651/1-184 DE Cytochrome c oxidase subunit 1 #=GS P29651/1-184 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Cladistia; Polypteriformes; Polypteridae; Polypterus; Polypterus sp.; #=GS P29651/1-184 DR GO; GO:0045277; #=GS P29651/1-184 DR EC; 1.9.3.1; #=GS P29650/1-158 AC P29650 #=GS P29650/1-158 OS Polyodon spathula #=GS P29650/1-158 DE Cytochrome c oxidase subunit 1 #=GS P29650/1-158 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Chondrostei; Acipenseriformes; Acipenseroidei; Polyodontidae; Polyodontinae; Polyodontini; Polyodon; Polyodon spathula; #=GS P29650/1-158 DR GO; GO:0045277; #=GS P29650/1-158 DR EC; 1.9.3.1; #=GS P29652/1-161 AC P29652 #=GS P29652/1-161 OS Pomoxis nigromaculatus #=GS P29652/1-161 DE Cytochrome c oxidase subunit 1 #=GS P29652/1-161 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Centrarchiformes; Centrarchoidei; Centrarchidae; Pomoxis; Pomoxis nigromaculatus; #=GS P29652/1-161 DR GO; GO:0045277; #=GS P29652/1-161 DR EC; 1.9.3.1; #=GS P29648/1-160 AC P29648 #=GS P29648/1-160 OS Megalops atlanticus #=GS P29648/1-160 DE Cytochrome c oxidase subunit 1 #=GS P29648/1-160 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Elopiformes; Megalopidae; Megalops; Megalops atlanticus; #=GS P29648/1-160 DR GO; GO:0045277; #=GS P29648/1-160 DR EC; 1.9.3.1; #=GS P29649/1-184 AC P29649 #=GS P29649/1-184 OS Pantodon buchholzi #=GS P29649/1-184 DE Cytochrome c oxidase subunit 1 #=GS P29649/1-184 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossiformes; Pantodontidae; Pantodon; Pantodon buchholzi; #=GS P29649/1-184 DR GO; GO:0045277; #=GS P29649/1-184 DR EC; 1.9.3.1; #=GS P29643/1-188 AC P29643 #=GS P29643/1-188 OS Amia calva #=GS P29643/1-188 DE Cytochrome c oxidase subunit 1 #=GS P29643/1-188 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Amiiformes; Amiidae; Amia; Amia calva; #=GS P29643/1-188 DR GO; GO:0045277; #=GS P29643/1-188 DR EC; 1.9.3.1; #=GS Q9ZXS0/1-180 AC Q9ZXS0 #=GS Q9ZXS0/1-180 OS Pimelodella chagresi #=GS Q9ZXS0/1-180 DE Cytochrome c oxidase subunit 1 #=GS Q9ZXS0/1-180 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Characiphysae; Siluriformes; Siluroidei; Heptapteridae; Pimelodella; Pimelodella chagresi; #=GS P29645/1-152 AC P29645 #=GS P29645/1-152 OS Geophagus steindachneri #=GS P29645/1-152 DE Cytochrome c oxidase subunit 1 #=GS P29645/1-152 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Cichlomorphae; Cichliformes; Cichlidae; Geophaginae; Geophagini; Geophagus; Geophagus steindachneri; #=GS P29645/1-152 DR GO; GO:0045277; #=GS P29645/1-152 DR EC; 1.9.3.1; #=GS P29646/1-155 AC P29646 #=GS P29646/1-155 OS Gomphosus varius #=GS P29646/1-155 DE Cytochrome c oxidase subunit 1 #=GS P29646/1-155 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Labriformes; Labridae; Gomphosus; Gomphosus varius; #=GS P29646/1-155 DR GO; GO:0045277; #=GS P29646/1-155 DR EC; 1.9.3.1; #=GS P29654/1-157 AC P29654 #=GS P29654/1-157 OS Scaphirhynchus platorynchus #=GS P29654/1-157 DE Cytochrome c oxidase subunit 1 #=GS P29654/1-157 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Chondrostei; Acipenseriformes; Acipenseroidei; Acipenseridae; Acipenserinae; Scaphirhychini; Scaphirhynchus; Scaphirhynchus platorynchus; #=GS P29654/1-157 DR GO; GO:0045277; #=GS P29654/1-157 DR EC; 1.9.3.1; #=GS O99180/1-166 AC O99180 #=GS O99180/1-166 OS Austrofundulus limnaeus #=GS O99180/1-166 DE Cytochrome c oxidase subunit 1 #=GS O99180/1-166 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Cyprinodontiformes; Aplocheiloidei; Rivulidae; Austrofundulus; Austrofundulus limnaeus; #=GS P29644/1-157 AC P29644 #=GS P29644/1-157 OS Atractosteus spatula #=GS P29644/1-157 DE Cytochrome c oxidase subunit 1 #=GS P29644/1-157 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Atractosteus; Atractosteus spatula; #=GS P29644/1-157 DR GO; GO:0045277; #=GS P29644/1-157 DR EC; 1.9.3.1; #=GS O99174/1-166 AC O99174 #=GS O99174/1-166 OS Leptolebias minimus #=GS O99174/1-166 DE Cytochrome c oxidase subunit 1 #=GS O99174/1-166 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Cyprinodontiformes; Aplocheiloidei; Rivulidae; Leptolebias; Leptolebias minimus; #=GS Q95872/1-189 AC Q95872 #=GS Q95872/1-189 OS Neobatrachus wilsmorei #=GS Q95872/1-189 DE Cytochrome c oxidase subunit 1 #=GS Q95872/1-189 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Neobatrachia; Myobatrachoidea; Myobatrachidae; Limnodynastinae; Neobatrachus; Neobatrachus wilsmorei; #=GS Q95866/1-189 AC Q95866 #=GS Q95866/1-189 OS Neobatrachus sudelli #=GS Q95866/1-189 DE Cytochrome c oxidase subunit 1 #=GS Q95866/1-189 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Neobatrachia; Myobatrachoidea; Myobatrachidae; Limnodynastinae; Neobatrachus; Neobatrachus sudelli; #=GF SQ 18 P29647/1-163 ---------YQHLFWFFGHPEVYILILPGFGMISHIVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPLLWALGFIFLFTVGGLTGIVLANSSLDIMLHDTYYVVAHFHYVLSMGAVFAIMGAL------------------------------------- Q95865/1-189 -------------------PEVYILILPGFGIISHVVAYYSSKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTTDLNVDTRAYFTSATMIIAIPTGVKVFSWLATMHGGIIKWDAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHNTWTKAHFGVMFTGVNLTFFPQH- Q33375/1-196 -------------XWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHF P29651/1-184 -------------FWFFGHPEVYILILPGFGMISHIVAYYSGKNEPFGYMGMVWAMMAIGLLGFIVWAHHMYTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIILANSSLDIMLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLHSTWTKIHFGVMF------------ P29650/1-158 -----------HLFWFFGHPEVYILILPGFGMISHIVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPLLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIM---------------------------------------- P29652/1-161 ---------YQHLFWFFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGASIKWETPLLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIVA--------------------------------------- P29648/1-160 ---------YQHLFWFFGHPEVYILILPGFGMISHIVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPLLWALGFIFLFTVGGLTGIVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIM---------------------------------------- P29649/1-184 --------------WFFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLHNTWTKIHFGVMFM----------- P29643/1-188 ----------QHLFWFFGHPEVYILILPGFGMVSHIVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMVIAIPTGVKVFSWLATLHGGAIKWETPLLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLHPTWSKIHFGVMFV----------- Q9ZXS0/1-180 PAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPLLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGAFVHWFPLIS----------------------------- P29645/1-152 ---------YEHLFWFFGHPEVYILILPGFGMISHIVAYYAGKKEPFGCMGMIWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMVIAIPTGVKVFSWLATLHGGSLKWETXXXXALGFIFLFTVGGLTGIVLANSSLDIMLHDTYYVVAHFHYVLS------------------------------------------------ P29646/1-155 ---------------FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPLLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIVA--------------------------------------- P29654/1-157 -------------FWFFGHPEVYILILPGFGMISHIVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPLLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMG--------------------------------------- O99180/1-166 -------ILYQHLFWFFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMLSIGLLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLYGGAVKWETPLLWTLGFIFLFTIGGLTGIVLANSSLDVALHDTYYVVAHFHYVLSMGAVFAIIAAFI------------------------------------ P29644/1-157 -----------HLFWFFGHPEVYILILPGFGMISHIVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPLLWALGFIFLFTVGGLTGIVLANSSLDIMLHDTYYVVAHFHYVLSMGAVFAI----------------------------------------- O99174/1-166 -------ILYQHLFWFFGHPEVYILILPGFGMISHLVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGTIKWETPLLWALGFIFLFTVGGLTGIILSNSSLDVMLHDTYYVVAHFHYVLSMGAVFAIIAAFV------------------------------------ Q95872/1-189 -------------------PEVYILILPGFGIISHVVAYYSSKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTTDLNVDTRAYFTSATMIIAIPTGVKVFSWLATMHGGIIKWDAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHNTWTKAHFGVMFTGVNLTFFPQH- Q95866/1-189 -------------------PEVYILILPGFGIISHVVAYYSSKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTTDLNVDTRAYFTSATMIIAIPTGVKVFSWLATMHGGIIKWDAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHNTWTKAHFGVMFTGVNLTFFPQH- #=GC scorecons 00000000011223455559999999999997899798996798999989998999869969999999999896777999999999999899999999999999978984799665577899999999899999979799989869999999999999999777777753232222221111111011111111111000000000000 #=GC scorecons_70 ___________________******************************************************************************************_*****__***************************************************_________________________________________ #=GC scorecons_80 ___________________*********************__***************_**_************__**********************************_***____***************************_***********************_________________________________________ #=GC scorecons_90 ___________________************_***_****__***************_**_************____****************************_***__**______****************_*_******_****************________________________________________________ //