# STOCKHOLM 1.0
#=GF ID 1.20.1640.10/FF/000048
#=GF DE protein patched homolog 1 isoform X2
#=GF AC 1.20.1640.10/FF/000048
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 66.986
#=GS A7RK33/917-1118       AC A7RK33
#=GS A7RK33/917-1118       OS Nematostella vectensis
#=GS A7RK33/917-1118       DE Predicted protein
#=GS A7RK33/917-1118       DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; 
#=GS W4YEW4/507-676        AC W4YEW4
#=GS W4YEW4/507-676        OS Strongylocentrotus purpuratus
#=GS W4YEW4/507-676        DE Uncharacterized protein
#=GS W4YEW4/507-676        DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS C3YM07/937-1139       AC C3YM07
#=GS C3YM07/937-1139       OS Branchiostoma floridae
#=GS C3YM07/937-1139       DE Patched protein-like protein
#=GS C3YM07/937-1139       DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS H2Z0N5/1006-1206      AC H2Z0N5
#=GS H2Z0N5/1006-1206      OS Ciona savignyi
#=GS H2Z0N5/1006-1206      DE Uncharacterized protein
#=GS H2Z0N5/1006-1206      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona savignyi; 
#=GS H2Y2W2/960-1158       AC H2Y2W2
#=GS H2Y2W2/960-1158       OS Ciona intestinalis
#=GS H2Y2W2/960-1158       DE Uncharacterized protein
#=GS H2Y2W2/960-1158       DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS H2Z0N6/974-1174       AC H2Z0N6
#=GS H2Z0N6/974-1174       OS Ciona savignyi
#=GS H2Z0N6/974-1174       DE Uncharacterized protein
#=GS H2Z0N6/974-1174       DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona savignyi; 
#=GS H2Z0N8/956-1155       AC H2Z0N8
#=GS H2Z0N8/956-1155       OS Ciona savignyi
#=GS H2Z0N8/956-1155       DE Uncharacterized protein
#=GS H2Z0N8/956-1155       DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona savignyi; 
#=GS H2Z0N7/945-1145       AC H2Z0N7
#=GS H2Z0N7/945-1145       OS Ciona savignyi
#=GS H2Z0N7/945-1145       DE Uncharacterized protein
#=GS H2Z0N7/945-1145       DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona savignyi; 
#=GS A0A1W5BB29/1054-1252  AC A0A1W5BB29
#=GS A0A1W5BB29/1054-1252  OS Ciona intestinalis
#=GS A0A1W5BB29/1054-1252  DE protein patched homolog 1 isoform X2
#=GS A0A1W5BB29/1054-1252  DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS A0A1W3JCM0/1457-1655  AC A0A1W3JCM0
#=GS A0A1W3JCM0/1457-1655  OS Ciona intestinalis
#=GS A0A1W3JCM0/1457-1655  DE protein patched homolog 1 isoform X1
#=GS A0A1W3JCM0/1457-1655  DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GF SQ 10
A7RK33/917-1118               ---LKTTEDIVQTIKEVRKICDEF-QAAGLPSYPSGIPFTFWEQYIMLRQHLMVAIIIVLGITFIVIAGFLWSVWTAIIIDLTLVMITVQLFGFMGLAGIKLSAVPAVTLILSVGVGVEFTVHMCMAFLTSTGDRNHRMQTAIEHVFTPIVDGAVSTLLGVIMLAGSEFDFIVRYFFHLLAALIVIGSLNGLMFLPVLLSFAGPHP-
W4YEW4/507-676                --NLNTTQKVVKVIKAVRNISDYY-KTEGLPNYPLGVPFTFWEQYIHLRFYLALSLVSLLGASFIIITLMLVNPWASLILIFVLGMITVELFGFMGLIGLKLSAIPAATLIVSVGIGVEFTLHTCYAFLTSIGNRERRVTFALEHTFSPVLDGAVSTLLGVVMLAGAEFDFIV----------------------------------
C3YM07/937-1139               VSGLKGTSEYIQLIKEVREVCE----ESEVPTYPLGVPFTYWEQYIFLRYYLMVALAAVLAAIFVVVAIVMVNPWLALIVVSVLAMMAVELFGVMGLLGIKLSAIPAVIIIASVGIGVEFTVHICFAYVTSLGDRNERMVSALEHMMSPVIDGAISTLLGVVMLAGSEFEFIVLYFFYVLVALVIIGLLNGLILLPVLLSLIGPGPE
H2Z0N5/1006-1206              -----ENADFVSVIKSVRSVCETM-TTSDFKSYPSGYPFTFWQQYIDLRYWLFVSLGCVIGAVFVVLSIVLFNPWAAAIMALFLAMIATELLGFMGAAGVKLSAVPAVILVASIGLGVEFTVHITFAFITSCGSRRERVVQSIGHMTGPVVDGAVSTLLGVVMLAGSEFDFIIKYFFQVLGILILLGVLNGLVLLPVVLSLIGPPPE
H2Y2W2/960-1158               -------EDFVSVIKSVRSVCETMAATTEVSSYPSGYPFTFWQQYIDLRYWLFVSLGCVIAAVFVVLSIVLFNPWAAAIMALFLAMIATELLGFMGAAGVKLSAVPAVILVASIGLGVEFTVHITFAFITSCGSRKERVVHSIGHMTGPVVDGAVSTLLGVVMLAGSEFDFIIKYFFQVLGILILLGVLNGLVLLPVVLSFIGPPP-
H2Z0N6/974-1174               -----ENADFVSVIKSVRSVCETM-TTSDFKSYPSGYPFTFWQQYIDLRYWLFVSLGCVIGAVFVVLSIVLFNPWAAAIMALFLAMIATELLGFMGAAGVKLSAVPAVILVASIGLGVEFTVHITFAFITSCGSRRERVVQSIGHMTGPVVDGAVSTLLGVVMLAGSEFDFIIKYFFQVLGILILLGVLNGLVLLPVVLSLIGPPPE
H2Z0N8/956-1155               -----ENADFVSVIKSVRSVCETM-TTSDFKSYPSGYPFTFWQQYIDLRYWLFVSLGCVIGAVFVVLSIVLFNPWAAAIMALFLAMIATELLGFMGAAGVKLSAVPAVILVASIGLGVEFTVHITFAFITSCGSRRERVVQSIGHMTGPVVDGAVSTLLGVVMLAGSEFDFIIKYFFQVLGILILLGVLNGLVLLPVVLSLIGPPP-
H2Z0N7/945-1145               -----ENADFVSVIKSVRSVCETM-TTSDFKSYPSGYPFTFWQQYIDLRYWLFVSLGCVIGAVFVVLSIVLFNPWAAAIMALFLAMIATELLGFMGAAGVKLSAVPAVILVASIGLGVEFTVHITFAFITSCGSRRERVVQSIGHMTGPVVDGAVSTLLGVVMLAGSEFDFIIKYFFQVLGILILLGVLNGLVLLPVVLSLIGPPPE
A0A1W5BB29/1054-1252          -------EDFVSVIKSVRSVCETMAATTEVSSYPSGYPFTFWQQYIDLRYWLFVSLGCVIAAVFVVLSIVLFNPWAAAIMALFLAMIATELLGFMGAAGVKLSAVPAVILVASIGLGVEFTVHITFAFITSCGSRKERVVHSIGHMTGPVVDGAVSTLLGVVMLAGSEFDFIIKYFFQVLGILILLGVLNGLVLLPVVLSFIGPPP-
A0A1W3JCM0/1457-1655          -------EDFVSVIKSVRSVCETMAATTEVSSYPSGYPFTFWQQYIDLRYWLFVSLGCVIAAVFVVLSIVLFNPWAAAIMALFLAMIATELLGFMGAAGVKLSAVPAVILVASIGLGVEFTVHITFAFITSCGSRKERVVHSIGHMTGPVVDGAVSTLLGVVMLAGSEFDFIIKYFFQVLGILILLGVLNGLVLLPVVLSFIGPPP-
#=GC scorecons                000112335474699499476723025455459959499989699939954947674476674977555574779564954549597657969799559599997996676596959999979556985993949459643565954597699979999997999969979963555345335433535555345553553455250
#=GC scorecons_70             __________*__**_**_***__________**_*_*****_***_**__*_***__*__*_***____*_***_*_*____*_***_**_****__*_********_**_***_*******___**_**_*_*__**___*_*___*************************__________________________________
#=GC scorecons_80             __________*__**_**______________**_*_*****_***_**__*___*_______*_*____*_*_*___*____*_**__**_****__*_****_**__*__*_*_*****_*___**_**_*_*__*______*___**_***************_*****___________________________________
#=GC scorecons_90             _____________**_**______________**_*_*****_***_**__*___________*__________*___*____*_*____*_*_**__*_****_**_____*_*_*****_*___**_**_*_*__*______*___*__***_******_****_**_**___________________________________
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