# STOCKHOLM 1.0 #=GF ID 1.20.1560.10/FF/000200 #=GF DE HlyB/MsbA family ABC transporter #=GF AC 1.20.1560.10/FF/000200 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 95.081 #=GS O25322/3-334 AC O25322 #=GS O25322/3-334 OS Helicobacter pylori 26695 #=GS O25322/3-334 DE Multidrug resistance protein (SpaB) #=GS O25322/3-334 DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; #=GS Q9RRT1/46-368 AC Q9RRT1 #=GS Q9RRT1/46-368 OS Deinococcus radiodurans R1 #=GS Q9RRT1/46-368 DE ABC transporter, ATP-binding protein, MsbA family #=GS Q9RRT1/46-368 DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus; Deinococcus radiodurans; #=GS Q7NIB9/31-362 AC Q7NIB9 #=GS Q7NIB9/31-362 OS Gloeobacter violaceus PCC 7421 #=GS Q7NIB9/31-362 DE HlyB/MsbA family ABC transporter #=GS Q7NIB9/31-362 DR ORG; Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacteraceae; Gloeobacter; Gloeobacter violaceus; #=GS Q8TLT8/1-339 AC Q8TLT8 #=GS Q8TLT8/1-339 OS Methanosarcina acetivorans C2A #=GS Q8TLT8/1-339 DE Uncharacterized protein #=GS Q8TLT8/1-339 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina acetivorans; #=GS Q83DA5/2-325 AC Q83DA5 #=GS Q83DA5/2-325 OS Coxiella burnetii RSA 493 #=GS Q83DA5/2-325 DE Phospholipid-lipopolysaccharide ABC transporter #=GS Q83DA5/2-325 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae; Coxiella; Coxiella burnetii; #=GS Q4Q570/118-429 AC Q4Q570 #=GS Q4Q570/118-429 OS Leishmania major #=GS Q4Q570/118-429 DE ABC transporter-like protein #=GS Q4Q570/118-429 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; #=GS A0A2J9KJF9/3-334 AC A0A2J9KJF9 #=GS A0A2J9KJF9/3-334 OS Helicobacter pylori #=GS A0A2J9KJF9/3-334 DE ABC transporter ATP-binding protein #=GS A0A2J9KJF9/3-334 DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; #=GS A0A1Y3E4P6/3-334 AC A0A1Y3E4P6 #=GS A0A1Y3E4P6/3-334 OS Helicobacter pylori SS1 #=GS A0A1Y3E4P6/3-334 DE Multidrug resistance protein #=GS A0A1Y3E4P6/3-334 DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; #=GS T5DD32/2-333 AC T5DD32 #=GS T5DD32/2-333 OS Helicobacter pylori FD719 #=GS T5DD32/2-333 DE Multidrug resistance protein #=GS T5DD32/2-333 DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; #=GF SQ 9 O25322/3-334 -TPMDTIKSIPLRTFILLYKSSPKCVVLASITVL---------FIGIIPSINILVMIRLI-------------DIVVNLLQNHTHFEYS-LLLPTLLLWGALLFLTHVFSGISSSLQTIIAEQFSINIIT-----QLANKLTKVKNLNF----FENKDHTIKLNAIHNGLYIRPLNYVSNLFFNLQRIIGLVSLFGILFSISIYLP-FIMIFATVPC----IFISNHIAK--KHSASIDKLQDKKESIQNYL--YSGLDNQKNKDNLLFNFMLNFHHKFIENKELYINHFVKIAQK-NLTLTIYADILTTILSIALFFLMVFIILSKLI-GVGAIAGYIQ-------AFSYTEQQLQYLSFYGKWFFAINKYFENYFCILDY----K Q9RRT1/46-368 ---L-------ARTLPDLIHSAPRLVLLMLGMAV---------VQGLMPALTILLGKWTV-------------DGVGAALAGREANLTL-----LAAAWAGTALLTQVTGVGAQVLQGYAADHFTVQTMG-----RLMNKMGELPGLDV----LEDPRFHDDIEILQMGAPRRPLNLVSTLLYLIRSVISAVSVSATLLSIGWWVP-LVVVAGMLPA----LLKQMEFYKL-GWSIFIQRTQDSREV--NYLQRVAM-RHEYAKEVRLYGLLPYLQSQYLSRTLTYQQTMRGVRNK-QLLGILPYQALSLLVTAGLFVYVVNRAQHGTY-TAGSVVLVIT-------ALAGLRDELRSISEYLSTGTEHLNWFAKFHRFLDATPGVT Q7NIB9/31-362 ---L-SMFVRLRRVLELVWQSGPLACVGLLLLTL---------VGGVLPAVQLYVGKLII-------------DTVVAASARPDGEIFTSRALGLVGLELGLLVLSAAVQTAGSILQEVFGEKLTFQINE-----RILHKADALE-LAY----FEDSKFYDALQRAQREAGYRPLGLLIQSLSITQSVVSMGALVVLLARLGAFVL-PVLVLASVPL----LVTTVRFVRM-GYLLVRARTPEARQM--SYIKTLMG-TDQAAKEIKLFNLGPYFIESFRNLFTKVHRETVDLALR-KGAARVGSSVFNAVCYAGLYGYLIWMALRRLL-TIGDLTLYAG-------AVLQLNNQLQSLSESGARVYQNALFIDDLFRFLDLEPR-R Q8TLT8/1-339 ---M-TSKNNSLQILYFLFRPHRKLLGIYFVSLL---------VFSLLDVLRVFLIYPLINYGLNINQNSTLIDRIYQSVSFGNLHPFL-------VYAIVLSIISIIIAGVEVSVSYLGSKTFATVRDT--TDRSVFNKLKNRP-YEY----FASHKQGDILYIGQQAVEQTGLA-VFNVVGFLQNILFCLFYLSFIFILSFKISTLMLILGAIYV---FFMKNIIFSRIYKHSLVLNRFARAKSVIYNEF--ISG-----IKTIFITDSIDFWAGN-------YNKAVYNIRRS-YVFAMILQRLPGAANNLLIFQIIALGAAGLYYITDGHFLPYIGIFGTLLLALYRTIPALNACQSQFGTIVQQLPAIEAVYNFLQENN--S Q83DA5/2-325 ---FDYIKV----ILSFLNKNDIKKLSLLILLMVLAACIELVGVGAIFPYIKILGDQQII-------QHNSILNYIFNFLHFKRDNSFL---VFIGFVIFVMLSLKAIITCINNYYQSKFAQNLNIRMSG-FCIRSYLFMPYQKA-MEFNTSTLSKYILTDVVY---------TVNVITFILSIVTDSIVVFSLACLILWVDFKIV-LLSVVSLTAL----LLLTMKGTKT-----KIKNISNENEYYTRKLYKIASDAFQGLKDIKINNVEAYFIEKF-----VFWR--RKNAEN-MVIYNVVANVPSVLMNLIGFGILLIILLYLLF-SHGNLISILPIVGIIAISIQRMLPAIARISLALGNVRQYHA---------------- Q4Q570/118-429 -------------------AGADRLFFLGLGPLSER------IFKPLLPMLFAFLRGAVV-------------GDGTESVA--SLSPYV-EGVLCRCLLMAVAILCYHFTSLVAHLAAYYAGSGAQNALTKDSVQRILHTPRPER-VAV----VNAVKLAQLITASGRALSDTTGELLTNVLSQVMYIVGFFA---VMLFLSYQLT-LTILVGVVGIQCLFVLQGISLHR------QGSRVTAEEASVQAYIANIL----QRSQTVLVFGCSEFVLDRMADRSAQLWRLTNGLNRSIHGYAAVSSGLTRLILVVAL-GLSNYYQQKGQL-GMRHTILYFA-------CFQSLVNTLASLSSAVSQLRATLGRLKTLEAMLR------ A0A2J9KJF9/3-334 -TPMDTIKSIPLRTFILLYKSSPKCVVLASITVL---------FIGIIPSINILVMIRLI-------------DIVVNLLQNHTHFEYS-LLLPTLLLWGALLFLTHVFSGISSSLQTIIAEQFSINIIT-----QLANKLTKVKNLNF----FENKDHTIKLNAIHNGLYIRPLNYVSNLFFNLQRIIGLVSLFGILFSISIYLP-FIMIFATVPC----IFISNHIAK--KHSASIDKLQDKKESIQNYL--YSGLDNQKNKDNLLFNFMLNFHHKFIENKELYINHFVKIAQK-NLTLTIYADILTTILSIALFFLMVFIILSKLI-GVGAIAGYIQ-------AFSYTEQQLQYLSFYGKWFFAINKYFENYFCILDY----K A0A1Y3E4P6/3-334 -TPMDTIKSIPLRTFILLYKSSPKCVVLASITVL---------FIGIIPSINILVMIRLI-------------DIVVNLLQNHTHFEYS-LLLPTLLLWGALLFLTHVFSGISSSLQTIIAEQFSINIIT-----QLANKLTKVKNLNF----FENKDHTIKLNAIHNGLYIRPLNYVSNLFFNLQRIIGLVSLFGILFSISIYLP-FIMIFATVPC----IFISNHIAK--KHSASIDKLQDKKESIQNYL--YSGLDNQKNKDNLLFNFMLNFHHKFIENKELYINHFVKIAQK-NLTLTIYADILTTILSIALFFLMVFIILSKLI-GVGAIAGYIQ-------AFSYTEQQLQYLSFYGKWFFAINKYFENYFCILDY----K T5DD32/2-333 QTPMDTMKNIPLRTFILLCKSSPKCVVLASITVL---------FVGIIPSLNILVMIRLI-------------DIVVNLLQNHTHFEYS-LLLPTLLLWGSLLFLAHVFSGILSSLQTIIAEQFSINIIT-----QLANKLTQVKNLSF----FENKDHTIKLNTIHNGLHIRPLNYVSNLFFNLQRIIGLVSLFGILFSISIYLP-FIMIFATMPC----ILISNHIAK--KHSASIDKLQDQKESMQNYLYSYSGLDNQKNKDNLLFNFMLNFHHKFIENKELYLNNFVKVAQK-NLISTIYADVLTTILSIALFFLMVFIILSKLI-SVGAIAGYIQ-------AFSSTQQQLQDLSFYGKWFFAINKYFENYFCIL------- #=GC scorecons 000412232112334235245345343534334500000000052555735355432357000000000000062534354223233540113122342245447334443434365333643444443500000444554333315450000544243342633232331245553644453354356334542246535533540544645354300005533433370022322435444354322555014430115237543645333443344122112524223445340343336243543453344552444333433440437344355300000006533423474357233323343332332332363000001 #=GC scorecons_70 ________________________________________________*__________*_____________*______________________________*_______________*___________________________________________________________________*________________________________________*_________________________________*____________________________________________________________________*______________________*___*___________________*_______ #=GC scorecons_80 ___________________________________________________________*____________________________________________*______________________________________________________________________________________________________________________________________________________________*____________________________________________________________________*______________________*___*___________________________ #=GC scorecons_90 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