# STOCKHOLM 1.0
#=GF ID 1.20.1560.10/FF/000138
#=GF DE Competence factor transporting ATP-binding protein/permease ComA
#=GF AC 1.20.1560.10/FF/000138
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 32.208
#=GS Q03727/154-467      AC Q03727
#=GS Q03727/154-467      OS Streptococcus pneumoniae TIGR4
#=GS Q03727/154-467      DE Transport/processing ATP-binding protein ComA
#=GS Q03727/154-467      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A3R9L3Y5/154-467  AC A0A3R9L3Y5
#=GS A0A3R9L3Y5/154-467  OS Streptococcus sp. BCA20
#=GS A0A3R9L3Y5/154-467  DE Lactococcin-G-processing and transport ATP-binding protein LagD
#=GS A0A3R9L3Y5/154-467  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sp. BCA20; 
#=GS A0A139NEV0/154-467  AC A0A139NEV0
#=GS A0A139NEV0/154-467  OS Streptococcus sp. DD10
#=GS A0A139NEV0/154-467  DE Competence-stimulating peptide ABC transporter ATP-binding protein ComA
#=GS A0A139NEV0/154-467  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sp. DD10; 
#=GS A0A3R8NDV8/154-467  AC A0A3R8NDV8
#=GS A0A3R8NDV8/154-467  OS Streptococcus halitosis
#=GS A0A3R8NDV8/154-467  DE Peptide cleavage/export ABC transporter
#=GS A0A3R8NDV8/154-467  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus halitosis; 
#=GS A0A0F2CQG7/154-467  AC A0A0F2CQG7
#=GS A0A0F2CQG7/154-467  OS Streptococcus oralis subsp. oralis
#=GS A0A0F2CQG7/154-467  DE Competence factor transporting ATP-binding protein/permease ComA
#=GS A0A0F2CQG7/154-467  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus oralis; Streptococcus oralis subsp. oralis; 
#=GS A0A2U3RYB1/1-291    AC A0A2U3RYB1
#=GS A0A2U3RYB1/1-291    OS Streptococcus pneumoniae
#=GS A0A2U3RYB1/1-291    DE Competence factor transporting ATP-binding/permease protein ComA
#=GS A0A2U3RYB1/1-291    DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS Q8DQW2/1-291        AC Q8DQW2
#=GS Q8DQW2/1-291        OS Streptococcus pneumoniae R6
#=GS Q8DQW2/1-291        DE Uncharacterized protein
#=GS Q8DQW2/1-291        DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A0T7TRP2/1-291    AC A0A0T7TRP2
#=GS A0A0T7TRP2/1-291    OS Streptococcus pneumoniae
#=GS A0A0T7TRP2/1-291    DE Competence factor transporting ATP-binding protein/permease ComA
#=GS A0A0T7TRP2/1-291    DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS P59653/154-467      AC P59653
#=GS P59653/154-467      OS Streptococcus pneumoniae R6
#=GS P59653/154-467      DE Transport/processing ATP-binding protein ComA
#=GS P59653/154-467      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS G6LJN5/154-467      AC G6LJN5
#=GS G6LJN5/154-467      OS Streptococcus pneumoniae GA44500
#=GS G6LJN5/154-467      DE Putative ABC transporter, ATP-binding protein ComA
#=GS G6LJN5/154-467      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A0B7KN15/154-467  AC A0A0B7KN15
#=GS A0A0B7KN15/154-467  OS Streptococcus pneumoniae
#=GS A0A0B7KN15/154-467  DE Competence factor transporting ATP-binding protein/permease ComA
#=GS A0A0B7KN15/154-467  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A0H2ZPI8/154-467  AC A0A0H2ZPI8
#=GS A0A0H2ZPI8/154-467  OS Streptococcus pneumoniae D39
#=GS A0A0H2ZPI8/154-467  DE Competence factor transporting ATP-binding/permease protein ComA
#=GS A0A0H2ZPI8/154-467  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A5LIT4/154-467      AC A5LIT4
#=GS A5LIT4/154-467      OS Streptococcus pneumoniae SP6-BS73
#=GS A5LIT4/154-467      DE Competence factor transporting ATP-binding/permease protein ComA
#=GS A5LIT4/154-467      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A5M5K2/160-473      AC A5M5K2
#=GS A5M5K2/160-473      OS Streptococcus pneumoniae SP14-BS69
#=GS A5M5K2/160-473      DE Competence factor transporting ATP-binding/permease protein ComA
#=GS A5M5K2/160-473      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A0T8BCB0/154-467  AC A0A0T8BCB0
#=GS A0A0T8BCB0/154-467  OS Streptococcus pneumoniae
#=GS A0A0T8BCB0/154-467  DE Competence factor transporting ATP-binding protein/permease ComA
#=GS A0A0T8BCB0/154-467  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GF SQ 15
Q03727/154-467              LLSFIPILVKQRGLIANIVLATLLVTVINIVGSYYLQSIIDTYVPDQMRSTLGIISIGLVIVYIFQQILSYAQEYLLLVLGQRLSIDVILSYIKHVFHLPMSFFATRRTGEIVSRFTDANSIIDALASTILSIFLDVSTVVIISLVLFSQNTNLFFMTLLALPIYTVIIFAFMKPFEKMNRDTMEANAVLSSSIIEDINGIETIKSLTSESQRYQKIDKEFVDYLKKSFTYSRAESQQKALKKVAHLLLNVGILWMGAVLVMDGKMSLGQLITYNTLLVYFTNPLENIINLQTKLQTAQVANNRLNEVYLVASE
A0A3R9L3Y5/154-467          LLSFLPILLKQRGLIANIVLATLLVTLINIVGSYYLQSIIDSYVPDQMRSTLGIISIGLVIVYILQQILSYAQEYLLLVLGQRLSIDVILSYIKHVFHLPMSFFATRRTGEIVSRFTDANSIIDALASTILSIFLDVSTILIISLVLFSQNMTLFFISLLALPIYTVIIFAFMKPFEKMNRDTMEANAVLSSSIIEDINGIETIKSLTSESSRYQKIDKEFVAYLKKSFTYSRAESQQKALKKVAQLLLNVAVLWLGAILVMDGKMSLGQLITYNTLLVYFTNPLENIINLQTKLQTAQVANNRLNEVYLVASE
A0A139NEV0/154-467          LFSFLPILTKQKGLIANIILATLLVTIINIIGSYYLQSIIDTYVPDQMRSTLGIISIGLVLVYILQQVLGYAQEYLLLILGQRLSIDVILSYIKHVFHLPMSFFATRRTGEIISRFTDANSIIDALASTILSIFLDVSTVLIISMVLFSQNINLFFISLLALPIYTVIIFAFMKPFERMNRDTMEANATLSSSIIEDINGIETIKSLTSESLRYQKIDKEFVAYLKKSFTYSRAESQQKALKKVTQLLLNVAILWMGATLVMDNQMTLGQLITYNTLLVYFTNPLENIINLQTKLQTAQVANNRLNEVYLVESE
A0A3R8NDV8/154-467          LLSFLPILLKQRGLIANIVLATLLVTLINIVGSYYLQSIIDSYVPDQMRSTLGIISMGLVIVYILQQILSYAQEYLLLVLGQRLSIDVILSYIKHVFHLPMSFFATRRTGEIVSRFTDANSIIDALASTILSIFLDVSTILIISLVLFSQNMTLFFITLLALPIYTVIIFAFMKPFEKMNRDTMEANAVLSSSIIEDINGIETIKSLTSESSRYQKIDKEFVTYLKKSFTYSRAESQQKALKKVAQLLLNVVVLWLGAVLVMDGKMSLGQLITYNTLLVYFTNPLENIINLQTKLQTAQVANNRLNEVYLVASE
A0A0F2CQG7/154-467          LLSFLPILLKQRGLIANIVLATLLVTLINIVGSYYLQSIIDSYVPDQMRSTLGIISMGLVIVYILQQILSYAQEYLLLILGQRLSIDVILSYIKHIFHLPMSFFATRRTGEIVSRFTDANSIIDALASTILSIFLDVSTILIISLVLFSQNMTLFFISLLALPIYTVIIFAFMKPFEKMNRDTMEANAVLSSSIIEDINGIETIKSLTSESQRYQKIDKEFVTYLKKSFTYSRAESQQKALKKVSQLLLNVAVLWMGAVLVMDGKMSLGQLITYNTLLIYFTNPLENIINLQTKLQTAQVANNRLNEVYLVASE
A0A2U3RYB1/1-291            -----------------------MVTIINIGGSYYLQGILDEYIPNQMKSTLGIISVGLVITYILQQVMSFSRDYLLTVLSQRLSIDVILSYIRHIFELPMSFFATRRTGEIISRFTDANSIIDALASTILSLFLDVSILILVGGVLLAQNPNLFLLSLLSIPIYMFIIFSFMKPFEKMNHDVMQSNSMVSSAIIEDINGIETIKSLTSEENRYQNIDSEFVDYLEKSFKLSKYSILQTSLKQGTKLVLNILILWFGAQLVMSSKISIGQLITFNTLFSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESE
Q8DQW2/1-291                -----------------------MVTIINIGGSYYLQGILDEYIPNQMKSTLGIISVGLVITYILQQVMSFSRDYLLTVLSQRLSIDVILSYIRHIFELPMSFFATRRTGEIISRFTDANSIIDALASTILSLFLDVSILILVGGVLLAQNPNLFLLSLLSIPIYMFIIFSFMKPFEKMNHDVMQSNSMVSSAIIEDINGIETIKSLTSEENRYQNIDSEFVDYLEKSFKLSKYSILQTSLKQGTKLVLNILILWFGAQLVMSSKISIGQLITFNTLFSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESE
A0A0T7TRP2/1-291            -----------------------MVTIINIGGSYYLQGILDEYIPNQMKSTLGIISVGLVITYILQQVMSFSRDYLLTVLSQRLSIDVILSYIRHIFELPMSFFATRRTGEIISRFTDANSIIDALASTILSLFLDVSILILVGGVLLAQNPNLFLLSLLSIPIYMFIIFSFMKPFEKMNHDVMQSNSMVSSAIIEDINGIKTIKSLTSEENRYQNIDSEFVDYLEKSFKLSKYSILQTSLKQGTKLVLNILILWFGAQLVMSSKISIGQLITFNTLFSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESE
P59653/154-467              LLSFIPILVKQRGLIANIVLATLLVTVINIVGSYYLQSIIDTYVPDQMRSTLGIISIGLVIVYILQQILSYAQEYLLLVLGQRLSIDVILSYIKHVFHLPMSFFATRRTGEIVSRFTDANSIIDALASTILSIFLDVSTVVIISLVLFSQNTNLFFMTLLALPIYTVIIFAFMKPFEKMNRDTMEANAVLSSSIIEDINGIETIKSLTSESQRYQKIDKEFVDYLKKSFTYSRAESQQKALKKVAHLLLNVGILWMGAVLVMDGKMSLGQLITYNTLLVYFTNPLENIINLQTKLQTAQVANNRLNEVYLVASE
G6LJN5/154-467              LLSFIPILVKQRGLIANIVLATLLVTVINIVGSYYLQSIIDTYVPDQMRSTLGIISIGLVIVYILQQILSYAQEYLLLVLGQRLSIDVILSYIKHVFHLPMSFFATRRTGEIVSRFTDANSIIDALASTILSIFLDVSTVVIISLVLFSQNTNLFFMTLLALPIYTVIIFAFMKPFEKMNRDTMEANAVLSSSIIEDINGIETIKSLTSESQRYQKIDKEFVDYLKKSFTYSRAESQQKALKKVAHLLLNVGILWMGAVLVMDGKMSLGQLITYNTLLVYFTNPLENIINLQTKLQTAQVANNRLNEVYLVASE
A0A0B7KN15/154-467          LLSFIPILVKQRGLIANIVLATLLVTVINIVGSYYLQSIIDTYVPDQMRSTLGIISIGLVIVYILQQILSYAQEYLLLVLGQRLSIDVILSYIKHVFHLPMSFFATRRTGEIVSRFTDANSIIDALASTILSIFLDVSTVVIISLVLFSQNTNLFFMTLLALPIYTVIIFAFMKPFEKMNRDTMEANAVLSSSIIEDINGIETIKSLTSESQRYQKIDKEFVDYLKKSFTYSRAESQQKALKKVAHLLLNVGILWMGAVLVMDGKMSLGQLITYNTLLVYFTNPLENIINLQTKLQTAQVANNRLNEVYLVASE
A0A0H2ZPI8/154-467          LLSFIPILVKQRGLIANIVLATLLVTVINIVGSYYLQSIIDTYVPDQMRSTLGIISIGLVIVYILQQILSYAQEYLLLVLGQRLSIDVILSYIKHVFHLPMSFFATRRTGEIVSRFTDANSIIDALASTILSIFLDVSTVVIISLVLFSQNTNLFFMTLLALPIYTVIIFAFMKPFEKMNRDTMEANAVLSSSIIEDINGIETIKSLTSESQRYQKIDKEFVDYLKKSFTYSRAESQQKALKKVAHLLLNVGILWMGAVLVMDGKMSLGQLITYNTLLVYFTNPLENIINLQTKLQTAQVANNRLNEVYLVASE
A5LIT4/154-467              LLSFIPILVKQRGLIANIVLATLLVTVINIVGSYYLQSIIDTYVPDQMRSTLGIISIGLVIVYILQQILSYAQEYLLLVLGQRLSIDVILSYIKHVFHLPMSFFATRRTGEIVSRFTDANSIIDALASTILSIFLDVSTVVIISLVLFSQNTNLFFMTLLALPIYTVIIFAFMKPFEKMNRDTMEANAVLSSSIIEDINGIETIKSLTSESQRYQKIDKEFVDYLKKSFTYSRAESQQKALKKVAHLLLNVGILWMGAVLVMDGKMSLGQLITYNTLLVYFTNPLENIINLQTKLQTAQVANNRLNEVYLVASE
A5M5K2/160-473              LLSFIPILVKQRGLIANIVLATLLVTGINIVGSYYLQSIIDTYVPDQMRSTLGIISIGLVIVYILQQILSYAQEYLLLVLGQRLSIDVILSYIKHVFHLPMSFFATRRTGEIVSRFTDANSIIDALASTILSIFLDVSTVVIISLVLFSQNTNLFFMTLLALPIYTVIIFAFMKPFEKMNRDTMEANAVLSSSIIEDINGIETIKSLTSESQRYQKIDKEFVDYLKKSFTYSRAESQQKALKKVAHLLLNVGILWMGAVLVMDGKMSLGQLITYNTLLVYFTNPLENIINLQTKLQTAQVANNRLNEVYLVASE
A0A0T8BCB0/154-467          LLSFIPILVKQRGLIANIVLATLLVTVINIVGSYYLQSIIDTYVPDQMRSTLGIISIGLVIVYILQQILSYAQEYLLLVLGQRLSIDVILSYIKHVFHLPMSFFATRRTGEIVSRFTDANSIIDALASTILSIFLDVSTVVIISLVLFSQNTNLFFMTLLALPIYTVIIFAFMKPFEKMNRDTMEANAVLSSSIIEDINGIETIKSLTSESQRYQKIDKEFVDYLKKSFTYSRAESQQKALKKVAHLLLNVGILWMGAVLVMDGKMSLGQLITYNTLLVYFTNPLENIINLQTKLQTAQVANNRLNEVYLVASE
#=GC scorecons              22222222122222222222222699599949999996969497969979999999699985998997687667999589699999999999979795999999999999997999999999999999999969999965567649966994799656996699955999699999989969596696569969999999979999999954999699599969969995597455595699656596997379959949995586869999979996599969699999999999696999999999999599
#=GC scorecons_70           _______________________***_***_******_***_*******************_*********_*****_**_****************_****************************************___**__***_**_****__**_****__***_***********_**_*__***_*****************__***_**_******_***__**____*__***___*****_***_**_***__**************_***_*************_**************_**
#=GC scorecons_80           ________________________**_***_******_*_*_*_*_**_*******_****_*****__**___***_**_************_*_*_**************_*******************_*****_______**__**_***___**__***__***_*********_*_*__*___**_*****************__***_**_***_**_***__*_____*__**____*_**__***_**_***__*_*_*********__***_*_***********_*_************_**
#=GC scorecons_90           ________________________**_***_******_*_*_*_*_**_*******_****_*****__*____***_**_************_*_*_**************_*******************_*****_______**__**__**___**__***__***_*********_*_*__*___**_********_********__***_**_***_**_***__*_____*__**____*_**___**_**_***__*_*_*****_***__***_*_***********_*_************_**
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