# STOCKHOLM 1.0
#=GF ID 1.20.1540.10/FF/000049
#=GF DE Rhomboid family intramembrane serine protease
#=GF AC 1.20.1540.10/FF/000049
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 74.265
#=GS B1L6D3/10-219            AC B1L6D3
#=GS B1L6D3/10-219            OS Candidatus Korarchaeum cryptofilum OPF8
#=GS B1L6D3/10-219            DE Rhomboid family protein
#=GS B1L6D3/10-219            DR ORG; Archaea; Candidatus Korarchaeota; Candidatus Korarchaeum; Candidatus Korarchaeum cryptofilum; 
#=GS O69868/120-172_212-364   AC O69868
#=GS O69868/120-172_212-364   OS Streptomyces coelicolor A3(2)
#=GS O69868/120-172_212-364   DE Putative integral membrane protein
#=GS O69868/120-172_212-364   DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group; Streptomyces coelicolor; 
#=GS Q8ZXU2/11-226            AC Q8ZXU2
#=GS Q8ZXU2/11-226            OS Pyrobaculum aerophilum str. IM2
#=GS Q8ZXU2/11-226            DE Integral membrane protein (Rhomboid related), putative
#=GS Q8ZXU2/11-226            DR ORG; Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum aerophilum; 
#=GS Q7NDH2/9-233             AC Q7NDH2
#=GS Q7NDH2/9-233             OS Gloeobacter violaceus PCC 7421
#=GS Q7NDH2/9-233             DE Gll4263 protein
#=GS Q7NDH2/9-233             DR ORG; Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacteraceae; Gloeobacter; Gloeobacter violaceus; 
#=GS A0A3R9SW05/9-61_101-252  AC A0A3R9SW05
#=GS A0A3R9SW05/9-61_101-252  OS Streptomyces sp. WAC08401
#=GS A0A3R9SW05/9-61_101-252  DE Rhomboid family intramembrane serine protease
#=GS A0A3R9SW05/9-61_101-252  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. WAC08401; 
#=GS A0A3S8XLW2/9-61_101-252  AC A0A3S8XLW2
#=GS A0A3S8XLW2/9-61_101-252  OS Streptomyces sp. KPB2
#=GS A0A3S8XLW2/9-61_101-252  DE Rhomboid family intramembrane serine protease
#=GS A0A3S8XLW2/9-61_101-252  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. KPB2; 
#=GS H1QEJ7/9-61_101-252      AC H1QEJ7
#=GS H1QEJ7/9-61_101-252      OS Streptomyces coelicoflavus ZG0656
#=GS H1QEJ7/9-61_101-252      DE Integral membrane protein
#=GS H1QEJ7/9-61_101-252      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces coelicoflavus; 
#=GF SQ 7
B1L6D3/10-219                    --SYVRPLVSYSLIAINVMVFILESSSPE------------LMSSLISGYGFTP-L--------------AFIGRPLSNSYRLITSIFLHGGWIHLIGNMLYLFIFGDNVEAALGRINYLIFYLFSGISANFAH----------MIASSFLGMPLDLPAVGASGAISGILGAYLIFYPRARIITVILLGYLVTLRPISAKYFLIFWFILQLIPGILG---------EAVGVAYWAHIGGFLVGIVIALPYRFSRRDRL-
O69868/120-172_212-364           NPARRTPWVTYALILANVLVFLFTPGMAGSASGDGSLAQMCDLQAFLDHWAAVLSV---------------------------LTAMFLHGGWLHLLGNMLFLWIFGNNVEDRMGHVPFLLFYGVCGYAATYGF--------------ALLDADSGAPLIGASGAIAGVLGAYLVLYPRARVWVLVPF-LVFLPLRLPAWLVLGFWFGLQAVYSSGGAVS------DAGTVAYVAHVVGFVVGMLIAWPLRRGT-----
Q8ZXU2/11-226                    --TMTFPFVTKALVFINVAVFIYELLNP----------------AVIQKYAFVPAL--------------AF-----SEPYRWVTHMFLHGGLLHIVGNMIYLWVFGDNVEDHYGHFRFLALYLMWGLAAAFVHYWAVASQAALLSAVGVVGDPMWVPAVGASGAISGVLGAYMVLYPHARILTLTFF-IVITLVEIPAWAYIGFWFIYQLFYGALEFIT-----LQSSGVAYFAHIGGFIAGALTALIYRRRRAVHYY
Q7NDH2/9-233                     R-GYRIPWVNYGLIVTCIAVFIYEISLGEK-----------QLEIFINQYAAVPAVIVPALGAIFQGDLGAV-----GLLAPLVTAMFLHGGILHLAGNMLYLWIFGDNVEERMGHFGYLAFYLICGVVSILAQ--------------TFLESGSKIASLGASGAIAGVLGAYIVMFPRAPVQGIFPLGFIPIPFKLPAVWFIGIWFLQQFLSTLATVNTSNVPDMEEGGVAYFAHAAGFVAGLVLVRVFARETDP---
A0A3R9SW05/9-61_101-252          NPARRTPWVTYALILANVLVFLFTPGTAASVTGEGSLAQLCHLEAFLDQYAAVLSV---------------------------LTAMFLHGGWLHLLGNMLFLWIFGNNVEDRLGHLPYLLFYGVCGYAATYGF--------------ALLDSDSGAPLIGASGAIAGVLGAYLVLYPRARVWVLVPF-LIFLPLRLPAWIVLGFWFGLQAVYSSGGAVS------EAGTVAYAAHVFGFVAGMLIAWPLRRG------
A0A3S8XLW2/9-61_101-252          NPARRTPWVTYALILANVLVFLFTPGMTGSATGDGSLAQMCDLQAFLDHWAAVLSV---------------------------LTAMFLHGGWLHLLGNMLFLWIFGNNVEDRMGHLPFLLFYGVCGYAATYGF--------------ALLNADSGAPLIGASGAIAGVLGAYLVLYPRARVWVLVPF-LIFLPLRLPAWLVLGFWFGLQAVYSSGGAVS------DAGTVAYVAHVVGFVVGMLIAWPLRRG------
H1QEJ7/9-61_101-252              NPARRTPWVTYALILANVLVFLFTPGMTGSATGDGSLAQMCDLQAFLDHWAAVLSV---------------------------LTAMFLHGGWLHLLGNMLFLWIFGNNVEDRMGHVPFLLFYGVCGYAATYGF--------------ALLNSGSGAPLIGASGAIAGVLGAYLVLFPRARVWVLVPF-LIFLPLRLPAWLVLGFWFGLQAVYSSGGAVS------DAGTVAYVAHVVGFVVGMLIAWPLRRG------
#=GC scorecons                   1143439495659744674996553434310011111111114255644564653600000000000000210000010011159479999947974999779679969995549743794794459357454400000000000000457433434745999999597999967579796624544604534534669324666993494444335223000000554599939953996594657345654100000
#=GC scorecons_70                ______*_*___**__**_**_____________________________*_*__*____________________________*_******_***_**********_***___**__**_**___*__*____________________*______*__******_******_*_******_____*________***___*_***__*____________________***_**__**__*_*_*___*________
#=GC scorecons_80                ______*_*___**___*_**_______________________________________________________________*_******_***_******_***_***___**__**_**___*_______________________*_________******_******_*_****__________________*______**__*____________________***_**__**__*________________
#=GC scorecons_90                ______*_*___*______**_______________________________________________________________*__*****__*__***__*__**_***___*____*__*___*_________________________________******_*_****____*_*__________________*______**__*____________________***_**__**__*________________
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