# STOCKHOLM 1.0
#=GF ID 1.20.1540.10/FF/000033
#=GF DE Rhomboid family membrane protein
#=GF AC 1.20.1540.10/FF/000033
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 70.346
#=GS Q7UQD4/24-229     AC Q7UQD4
#=GS Q7UQD4/24-229     OS Rhodopirellula baltica SH 1
#=GS Q7UQD4/24-229     DE Uncharacterized protein
#=GS Q7UQD4/24-229     DR ORG; Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula; Rhodopirellula baltica; 
#=GS Q8A3X3/1-222      AC Q8A3X3
#=GS Q8A3X3/1-222      OS Bacteroides thetaiotaomicron VPI-5482
#=GS Q8A3X3/1-222      DE Rhomboid family protein
#=GS Q8A3X3/1-222      DR ORG; Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides thetaiotaomicron; 
#=GS Q8P7N4/1-209      AC Q8P7N4
#=GS Q8P7N4/1-209      OS Xanthomonas campestris pv. campestris str. ATCC 33913
#=GS Q8P7N4/1-209      DE Integral membrane protein
#=GS Q8P7N4/1-209      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; 
#=GS Q5GXN5/27-237     AC Q5GXN5
#=GS Q5GXN5/27-237     OS Xanthomonas oryzae pv. oryzae KACC 10331
#=GS Q5GXN5/27-237     DE Integral membrane protein
#=GS Q5GXN5/27-237     DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas oryzae; 
#=GS A0A0A6TIS7/1-209  AC A0A0A6TIS7
#=GS A0A0A6TIS7/1-209  OS Xanthomonas phaseoli pv. phaseoli
#=GS A0A0A6TIS7/1-209  DE Integral membrane protein
#=GS A0A0A6TIS7/1-209  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas phaseoli; 
#=GS A0A3T0G061/1-209  AC A0A3T0G061
#=GS A0A3T0G061/1-209  OS Xanthomonas sp. ISO98C4
#=GS A0A3T0G061/1-209  DE Membrane protein
#=GS A0A3T0G061/1-209  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas sp. ISO98C4; 
#=GS A0A174TXD9/1-222  AC A0A174TXD9
#=GS A0A174TXD9/1-222  OS Bacteroides thetaiotaomicron
#=GS A0A174TXD9/1-222  DE Rhomboid family intramembrane serine protease
#=GS A0A174TXD9/1-222  DR ORG; Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides thetaiotaomicron; 
#=GS A0A0W7XP74/1-209  AC A0A0W7XP74
#=GS A0A0W7XP74/1-209  OS Xanthomonas phaseoli pv. manihotis
#=GS A0A0W7XP74/1-209  DE Uncharacterized protein
#=GS A0A0W7XP74/1-209  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas phaseoli; 
#=GS A0A443ZCP5/1-209  AC A0A443ZCP5
#=GS A0A443ZCP5/1-209  OS Xanthomonas axonopodis pv. manihotis str. CIO151
#=GS A0A443ZCP5/1-209  DE Rhomboid family intramembrane serine protease
#=GS A0A443ZCP5/1-209  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas phaseoli; 
#=GS A0A1V9GUW4/1-209  AC A0A1V9GUW4
#=GS A0A1V9GUW4/1-209  OS Xanthomonas phaseoli pv. dieffenbachiae
#=GS A0A1V9GUW4/1-209  DE Rhomboid family intramembrane serine protease
#=GS A0A1V9GUW4/1-209  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas phaseoli; 
#=GS G0CKS2/1-209      AC G0CKS2
#=GS G0CKS2/1-209      OS Xanthomonas campestris pv. raphani 756C
#=GS G0CKS2/1-209      DE Integral membrane protein
#=GS G0CKS2/1-209      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; 
#=GS A0A0H2X648/1-209  AC A0A0H2X648
#=GS A0A0H2X648/1-209  OS Xanthomonas campestris pv. campestris str. 8004
#=GS A0A0H2X648/1-209  DE Integral membrane protein
#=GS A0A0H2X648/1-209  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; 
#=GS B0RR49/1-209      AC B0RR49
#=GS B0RR49/1-209      OS Xanthomonas campestris pv. campestris str. B100
#=GS B0RR49/1-209      DE Rhomboid family membrane protein
#=GS B0RR49/1-209      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; 
#=GS A0A3E1L8W5/1-209  AC A0A3E1L8W5
#=GS A0A3E1L8W5/1-209  OS Xanthomonas campestris
#=GS A0A3E1L8W5/1-209  DE Rhomboid family intramembrane serine protease
#=GS A0A3E1L8W5/1-209  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; 
#=GS A0A3E1L9T2/1-209  AC A0A3E1L9T2
#=GS A0A3E1L9T2/1-209  OS Xanthomonas campestris pv. campestris
#=GS A0A3E1L9T2/1-209  DE Rhomboid family intramembrane serine protease
#=GS A0A3E1L9T2/1-209  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; 
#=GF SQ 15
Q7UQD4/24-229             ----ENPLSMIKVLIGINVALFAVDW----LSKGLLSD---------WFGVSGQTLLQPWLWFQP---LTYGFMHNTEEVLPLHILFNMFLLFVFGSPVEQRLGGQEFLRFYLIAVIAGGIVGML-----YPCAISLFQTGQLSPEII-------GVSTIGASGAVIAVMVLFACYFPHQEVLFMF-VFPVKAWVLASVLVLIDLVSALGLFGSASS--TAFEVHLAGALFGFLYHRLQWS---------
Q8A3X3/1-222              -----MP-TVTKNLIIINVLVFF-----GTLVAQRYGID-LTNYLGL--------HFFLASDFNPAQLITYMFMHGGFS----HIFFNMFAVFMFGTVLERTWGPKRFLFYYIACGIGAGLIQEGVQYIKYIVDYSHYSQVDIGTGIIPMGEFLNMLTTVGASGAVYAILLAFGMLFPNNQLFIFPLPFPIKAKFFVIGYALIELY--AGFAN-NPGDNVAHFAHLGGMIFGFILIM-YWRKKSRNNGTY
Q8P7N4/1-209              -MLPQLP-PVTKALLIANLGMFILQWALGDLGAGLLPSDAALSPLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFN----HLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQLL---------MAWFTQS--------------GAPVLGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELL--LGATGWQPG--VAHFAHLGGMLFGWLLIR-HWRGQ-------
Q5GXN5/27-237             AAMPQLP-PITKALLIANIGLFLLQWAVGDLSAGVLPSDSVLSWLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFN----HLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQLL---------IAWFTQS--------------GAPVVGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELF--LGATGWQPG--VAHFAHLGGMLFGWLMIR-YWRGQS------
A0A0A6TIS7/1-209          --MPQLP-PITKALLIANIGLFLLQWAVGDLGAGVLPSDSVLSWLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFN----HLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLL---------MAWFTQS--------------GAPVVGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELV--LGATGWQPG--VAHFAHLGGMLFGWLMIR-YWRGQS------
A0A3T0G061/1-209          --MPQLP-PITKALLIANIGLFLLQWAVGDLGAGVLPSDSVLSWLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFN----HLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLL---------MAWFTQS--------------GAPVVGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELV--LGATGWQPG--VAHFAHLGGMLFGWLMIR-YWRGQS------
A0A174TXD9/1-222          -----MP-TVTKNLIIINVLVFF-----GTLVAQRYGID-LTNYLGL--------HFFLASDFNPAQLITYMFMHGGFS----HIFFNMFAVFMFGTVLERTWGPKRFLFYYIACGIGAGLIQEGVQYIKYIVDYSHYSQVDIGTGIIPMGEFLNMLTTVGASGAVYAILLAFGMLFPNNQLFIFPLPFPIKAKFFVIGYALIELY--AGFAN-NPGDNVAHFAHLGGMIFGFILIM-YWRKKSRNNGTY
A0A0W7XP74/1-209          --MPQLP-PITKALLIANIGLFLLQWAVGDLGAGVLPSDSVLSWLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFN----HLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLL---------MAWFTQS--------------GAPVVGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELV--LGATGWQPG--VAHFAHLGGMLFGWLMIR-YWRGQS------
A0A443ZCP5/1-209          --MPQLP-PITKALLIANIGLFLLQWAVGDLGAGVLPSDSVLSWLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFN----HLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLL---------MAWFTQS--------------GAPVVGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELV--LGATGWQPG--VAHFAHLGGMLFGWLMIR-YWRGQS------
A0A1V9GUW4/1-209          --MPQLP-PITKALLIANIGLFLLQWAVGDLGAGVLPSDSVLSWLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFN----HLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLL---------MAWFTQS--------------GAPVVGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELV--LGATGWQPG--VAHFAHLGGMLFGWLMIR-YWRGQS------
G0CKS2/1-209              -MLPQLP-PVTKALLIANLGMFILQWALGDLGAGLLPSDAALSPLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFN----HLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQLL---------MAWFTQS--------------GAPVLGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELL--LGATGWQPG--VAHFAHLGGMLFGWLLIR-HWRGQ-------
A0A0H2X648/1-209          -MLPQLP-PVTKALLIANLGMFILQWALGDLGAGLLPSDAALSPLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFN----HLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQLL---------MAWFTQS--------------GAPVLGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELL--LGATGWQPG--VAHFAHLGGMLFGWLLIR-HWRGQ-------
B0RR49/1-209              -MLPQLP-PVTKALLIANLGMFILQWALGDLGAGLLPSDAALSPLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFN----HLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQLL---------MAWFTQS--------------GAPVLGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELL--LGATGWQPG--VAHFAHLGGMLFGWLLIR-HWRGQ-------
A0A3E1L8W5/1-209          -MLPQLP-PVTKALLIANLGMFILQWALGDLGAGLLPSDAALSPLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFN----HLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQLL---------MAWFTQS--------------GAPVLGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELL--LGATGWQPG--VAHFAHLGGMLFGWLLIR-HWRGQ-------
A0A3E1L9T2/1-209          -MLPQLP-PVTKALLIANLGMFILQWALGDLGAGLLPSDAALSPLMLWPLSNGFDAFSPGASFMPWQLLTYAFLHGGFN----HLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQLL---------MAWFTQS--------------GAPVLGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGAIELL--LGATGWQPG--VAHFAHLGGMLFGWLLIR-HWRGQ-------
#=GC scorecons            0012359056794966595459433421639465454461334263642223422474644494936669949697765000096799966697995579666947799489656557795464500000100046374640000011000000055556999969565776776699765655553659699547765645979400594462477007976799796699565650596342000000
#=GC scorecons_70         ______*__***_***_*___*________*_*_______________________*_____*_*___***_*****______*************__******_****_***_*__***__*______________*_*____________________****_*___**********__*_____*_*_**__***____***____*_____**__***_*********_*_*___**_________
#=GC scorecons_80         ______*___**_*___*___*________*_________________________*_____*_*____**_*_*________*_****___****__**___*_*_**_**_____***_________________*______________________****_*___**_**__***__________*_**__**_____***____*_____**___*__*****__**_______*__________
#=GC scorecons_90         ______*____*_*___*___*________*_______________________________*_*____**_*_*________*__***___*_**___*___*___**__*_______*________________________________________****_*__________**___________*_**_________*_*____*__________*___**_*__**_______*__________
//