# STOCKHOLM 1.0
#=GF ID 1.20.1540.10/FF/000024
#=GF DE Blast:Protein rhomboid
#=GF AC 1.20.1540.10/FF/000024
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 77.812
#=GS P34356/122-311      AC P34356
#=GS P34356/122-311      OS Caenorhabditis elegans
#=GS P34356/122-311      DE Rhomboid-related protein 2
#=GS P34356/122-311      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS P34356/122-311      DR EC; 3.4.21.105; 
#=GS Q9VYW6/178-371      AC Q9VYW6
#=GS Q9VYW6/178-371      OS Drosophila melanogaster
#=GS Q9VYW6/178-371      DE Rhomboid-4
#=GS Q9VYW6/178-371      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VYW6/178-371      DR GO; GO:0004252; GO:0005509; GO:0005887; GO:0006508; GO:0030173; GO:0038005; 
#=GS D2A5C5/144-341      AC D2A5C5
#=GS D2A5C5/144-341      OS Tribolium castaneum
#=GS D2A5C5/144-341      DE Rhomboid-4
#=GS D2A5C5/144-341      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS D6WUJ2/123-310      AC D6WUJ2
#=GS D6WUJ2/123-310      OS Tribolium castaneum
#=GS D6WUJ2/123-310      DE Protein rhomboid-like Protein
#=GS D6WUJ2/123-310      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS A8XA87/154-343      AC A8XA87
#=GS A8XA87/154-343      OS Caenorhabditis briggsae
#=GS A8XA87/154-343      DE Protein CBR-ROM-2
#=GS A8XA87/154-343      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5UH92/122-309  AC A0A2G5UH92
#=GS A0A2G5UH92/122-309  OS Caenorhabditis nigoni
#=GS A0A2G5UH92/122-309  DE Uncharacterized protein
#=GS A0A2G5UH92/122-309  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A261C6N7/152-339  AC A0A261C6N7
#=GS A0A261C6N7/152-339  OS Caenorhabditis latens
#=GS A0A261C6N7/152-339  DE Uncharacterized protein
#=GS A0A261C6N7/152-339  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS E3LSB6/151-338      AC E3LSB6
#=GS E3LSB6/151-338      OS Caenorhabditis remanei
#=GS E3LSB6/151-338      DE CRE-ROM-2 protein
#=GS E3LSB6/151-338      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS B4M210/181-374      AC B4M210
#=GS B4M210/181-374      OS Drosophila virilis
#=GS B4M210/181-374      DE Uncharacterized protein
#=GS B4M210/181-374      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B4JNP1/181-374      AC B4JNP1
#=GS B4JNP1/181-374      OS Drosophila grimshawi
#=GS B4JNP1/181-374      DE GH24104
#=GS B4JNP1/181-374      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS A0A0M3QZ34/178-371  AC A0A0M3QZ34
#=GS A0A0M3QZ34/178-371  OS Drosophila busckii
#=GS A0A0M3QZ34/178-371  DE Rho-4
#=GS A0A0M3QZ34/178-371  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; 
#=GS A0A2G5UHA1/153-341  AC A0A2G5UHA1
#=GS A0A2G5UHA1/153-341  OS Caenorhabditis nigoni
#=GS A0A2G5UHA1/153-341  DE Uncharacterized protein
#=GS A0A2G5UHA1/153-341  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS B4H2T4/178-371      AC B4H2T4
#=GS B4H2T4/178-371      OS Drosophila persimilis
#=GS B4H2T4/178-371      DE GL26733
#=GS B4H2T4/178-371      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS B3MRK0/179-372      AC B3MRK0
#=GS B3MRK0/179-372      OS Drosophila ananassae
#=GS B3MRK0/179-372      DE Uncharacterized protein
#=GS B3MRK0/179-372      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS A0A3B0JX04/178-371  AC A0A3B0JX04
#=GS A0A3B0JX04/178-371  OS Drosophila guanche
#=GS A0A3B0JX04/178-371  DE Blast:Protein rhomboid
#=GS A0A3B0JX04/178-371  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS A0A1W4VK20/178-371  AC A0A1W4VK20
#=GS A0A1W4VK20/178-371  OS Drosophila ficusphila
#=GS A0A1W4VK20/178-371  DE protein rhomboid
#=GS A0A1W4VK20/178-371  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4IK37/178-371      AC B4IK37
#=GS B4IK37/178-371      OS Drosophila sechellia
#=GS B4IK37/178-371      DE GM13096
#=GS B4IK37/178-371      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4NQ62/179-372      AC B4NQ62
#=GS B4NQ62/179-372      OS Drosophila willistoni
#=GS B4NQ62/179-372      DE Uncharacterized protein
#=GS B4NQ62/179-372      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS Q29IP2/178-371      AC Q29IP2
#=GS Q29IP2/178-371      OS Drosophila pseudoobscura pseudoobscura
#=GS Q29IP2/178-371      DE Uncharacterized protein
#=GS Q29IP2/178-371      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4L8F8/181-374      AC B4L8F8
#=GS B4L8F8/181-374      OS Drosophila mojavensis
#=GS B4L8F8/181-374      DE Uncharacterized protein
#=GS B4L8F8/181-374      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS B3NUB1/178-371      AC B3NUB1
#=GS B3NUB1/178-371      OS Drosophila erecta
#=GS B3NUB1/178-371      DE Uncharacterized protein
#=GS B3NUB1/178-371      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4PXW3/178-371      AC B4PXW3
#=GS B4PXW3/178-371      OS Drosophila yakuba
#=GS B4PXW3/178-371      DE Uncharacterized protein
#=GS B4PXW3/178-371      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 22
P34356/122-311              -PIFLIFLSIVQLAFYLYYVV-DSSE-------GVWLSGPIPTMSPLIVSQYHLPELWRLFTYCLINVGIFHIIFNILIQLAIGVPLELVHR-WRIYILYFMGVLFGSILSLALDPTVFLCGGAAGSFSLIASHITTIATNFKEMENATCRLPILIVFAALDYVLAVYQRFFAPRIDKVSMYGHLGGLVAGILFTFILFR--------
Q9VYW6/178-371              PPLTMVLFSIIEIIMFLVDVIHFQDDPNYQDRIGESTSGPAATL--FIYNPYKRYEGWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVGLVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVY-RHLTDQHDQIGYVAHLSGAVAGLLVGIG-----------
D2A5C5/144-341              -KIGMITISIIELIFFAIDEYRERNS-------TLFAAGPMAQL--FIYDPERRYEAWRYLTYMFVHIGYLHLVVNLVVQVFLGIPLEMVHDWWRVLLVYVTGVVAGSLGTSITDPRAKLAGASGGVYSLITAHIATIIMNWHEMSMPFVQLAIFLLITGVDVGTSIYNRYWANLDEPIGYMAHFSGALAGLLVGICVLKNLQITKKE
D6WUJ2/123-310              -AVGMIIISLIEVIFFCVDEAIEADS-------TKSASGPISSV--FIYDPYKRQEAWRFITYMFVHVGAFHLFVNLLVQILLGTPLEMVHRWWRVLLIYFAGVLAGSLATSIADPTVRLAGASGGVYSLITAHIATIIMNWREMSFPIVQLFIFLIIMASDIGTAIYNRYFLEMDEHIGYMAHFAGAIAGLLVGLNV----------
A8XA87/154-343              -PLFLILVSIVQLALYLYYVI-DSSE-------GVWLSGPIPTLSPLIVSPFHLSELWRMVTYCIINVGIFHVIFNIIIQLAIGVPLELVHT-WRIYILYLMGVLFGSLLSLALDPTVFLCGGASGSFAIIASHLTTIVTNFREMESATVRLPLLIIFGALDYALAVYQRFFALRIDKVSMYGHIGGLVAGILFTFILFR--------
A0A2G5UH92/122-309          -PLFLIFVSIVQLAFYLYYVV-DSSE-------GVWLSGPIPTLSPLIVSPFHLSELWRMFTYCIINVGIFHVIFNIIIQLAIGVPLELVHT-WRIYVLYLMGVLFGSLLSLALDPTVFLCGGASGSFAIIASHLTTIVTNFREMESATVRLPLLIVFGALDYALAVYQRFFAPRIDKVSMYGHIGGLVAGILFTFIL----------
A0A261C6N7/152-339          -PLFLIFLSIVQLAFYLYYVI-DSSE-------GVWLSGPIPTMSPLIVSQFHLSELWRLVTYCLINVGIFHVIFNIIIQLAVGVPLELVHT-WRIYILYLMGALFGSLLSLALDPTVFLCGGAAGSFAIIGSHLTTIVTNFKEMENATIRLPFLIVFAALDYALAVYQRFFAPRIDKVSMYGHIGGLVAGILFTFIL----------
E3LSB6/151-338              -PLFLIFLSIVQLAFYLYYVI-DSSE-------GVWLSGPIPTMSPLIVSQFHLSELWRLVTYCLINVGIFHVIFNIIIQLAVGVPLELVHT-WRIYILYLMGALFGSLLSLALDPTVFLCGGAAGSFAIIGSHLTTIVTNFKEMENATIRLPFLIVFAALDYALAVYQRFFAPRIDKVSMYGHIGGLVAGILFTFIL----------
B4M210/181-374              PPLTMVIFSIIEIIMFLVDVIYFQDDPNHNQRLGESTNGPAATL--FIYNPYKRYESWRFLSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVALVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVY-RHLTDQHDQIGYVAHLSGAVAGLLVGIG-----------
B4JNP1/181-374              PPLTMVIFSIIEIIMFLVDVIYFQDDPNHNQRLGESTNGPAATL--FIYNPYKRYEAWRFVSYMFVHVGITHLLMNLIIQIFLGIALELVHHWWRVALVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLFFLVFCFTDLGTSVY-RHLTDQHDQIGYVAHLSGAVAGLLVGIG-----------
A0A0M3QZ34/178-371          PPLTMVIFSIIEIIMFLVDVIYFQDDPNHNQRLGESTNGPAATL--FIYNPYKRYESWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVALVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSIY-RHLTDQHDQIGYVAHLSGAIAGLLVGIG-----------
A0A2G5UHA1/153-341          -PLFLIFVSIVQLAFYLYYVV-DSSE-------GVWLSGPIPTLSPLIVSPFHLSELWRMFTYCIINVGIFHVIFNIIIQLAIGVPLELVHT-WRIYVLYLMGVLFGSLLSLALDPTVFLCGGASGSFAIIASHLTTIVTNFREMESATVRLPLLIVFGALDYALAVYQRFFAPRIDKVSMYGHIGGLVAGILFTFILF---------
B4H2T4/178-371              PPLTMVIFSIIEIIMFLVDVIHFQDDPNHNDRLGESTSGPAATL--FIYNPYKRYEAWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVALVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVY-RHLTDQHDQIGYVAHLSGAVAGLLVGIG-----------
B3MRK0/179-372              PPLTMVLFSIIEIIMFLVDVIHFQDDPNHQDRIGESTSGPAATL--FIYNPYKRYEGWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVALVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLLFCFTDLGTSVY-RHLTDQYDQIGYVAHLSGAVAGLLVGIG-----------
A0A3B0JX04/178-371          PPLTMVIFSIIEIIMFLVDIIHFQDDPNHNDRLGESTSGPAATL--FIYNPYKRYEAWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVALVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVY-RHLTDQHDQIGYVAHLSGAVAGLLVGIG-----------
A0A1W4VK20/178-371          PPLTMVIFSIIEIIMFLVDVIHFQDDPNYQDRIGESTSGPAATL--FIYNPYKRYEGWRFVSYMFVHVGIMHLMMNLTIQIFLGIALELVHHWWRVGLVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVY-RHLTDQRDQIGYVAHLSGAVAGLLVGIG-----------
B4IK37/178-371              PPLTMVLFSIIEIIMFLVDVIHFQDDPNYQDRIGESTSGPAATL--FIYNPYKRYEGWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVGLVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVY-RHLTDQHDQIGYVAHLSGALAGLLVGIG-----------
B4NQ62/179-372              PPLTMVIFSIIEIIMFLVDVIYFQDDPNHTDRLGESTNGPAATL--CIYNPYKRYEAWRFLSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVALVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVY-RHLTDQHDQIGYIAHLSGAVAGLLVGIG-----------
Q29IP2/178-371              PPLTMVIFSIIEIIMFLVDVIHFQDDPNHNDRLGESTSGPAATL--FIYNPYKRYEAWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVALVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVY-RHLTDQHDQIGYVAHLSGAVAGLLVGIG-----------
B4L8F8/181-374              PPLTMVIFSIIEIIMFLVDVIYFQDDPNHNQRLGESTNGPAATL--FIYNPYKRYESWRFLSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVALVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVY-RHLTDQHDQIGYIAHLSGALAGLLVGIG-----------
B3NUB1/178-371              PPLTMVLFSIIEIIMFLVDVIHFQDDPNYQDRIGESTSGPAATL--FIYNPYKRYEGWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVGLVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVY-RHLTDQHDQIGYVAHLSGAVAGLLVGIG-----------
B4PXW3/178-371              PPLTMVLFSIIEIIMFLVDVIHFQDDPNYQDRIGESTSGPAATL--FIYNPYKRYEGWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVGLVYLAGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVY-RHLTDQHDQIGYVAHLSGAVAGLLVGIG-----------
#=GC scorecons              1774674598766557745761345611111117445699557711695566654949955695576897596559678964696699799439973669759785996465555956695966595776956966996596499747576954667744494556791955545385765469559579969555410000000000
#=GC scorecons_70           _**_**__****___**__*_____________*___***__**___*__**___*_**___*__*_***_**__*****___**_*****__***__***_***_***______*_***_*___*_****__******_*__***_*_***__****___*____**_*______*_*____*__*_*****_______________
#=GC scorecons_80           _**_____**_____*_________________*____**__*____*_______*_**___*____***_*___*__**___*__*****__**____**_***_**_______*___*_*___*_*__*__*__**__*__***_*___*____**___*____**_*______*______*__*_***_*_______________
#=GC scorecons_90           ________**____________________________**_______*_______*_**___*____**__*___*__**___*__**_**__**____*__*_*_**_______*___*_*___*____*__*__**__*__**______*_________*_____*_*______*______*__*__**_*_______________
//