# STOCKHOLM 1.0
#=GF ID 1.20.1450.10/FF/000002
#=GF DE Ammonia monooxygenase subunit A
#=GF AC 1.20.1450.10/FF/000002
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 25.913
#=GS Q701V3/4-214      AC Q701V3
#=GS Q701V3/4-214      OS uncultured crenarchaeote
#=GS Q701V3/4-214      DE AmoA-like protein
#=GS Q701V3/4-214      DR ORG; Archaea; Crenarchaeota; uncultured crenarchaeote; 
#=GS Q701V3/4-214      DR GO; GO:0004497; 
#=GS K0ILE5/1-201      AC K0ILE5
#=GS K0ILE5/1-201      OS Candidatus Nitrososphaera gargensis Ga9.2
#=GS K0ILE5/1-201      DE Ammonia monooxygenase subunit A
#=GS K0ILE5/1-201      DR ORG; Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera; Candidatus Nitrososphaera gargensis; 
#=GS A0A0H3W809/4-212  AC A0A0H3W809
#=GS A0A0H3W809/4-212  OS archaeon G61
#=GS A0A0H3W809/4-212  DE Ammonia monooxygenase subunit A
#=GS A0A0H3W809/4-212  DR ORG; Archaea; archaeon G61; 
#=GS G8GSI4/5-212      AC G8GSI4
#=GS G8GSI4/5-212      OS uncultured archaeon
#=GS G8GSI4/5-212      DE Ammonia monooxygenase
#=GS G8GSI4/5-212      DR ORG; Archaea; uncultured archaeon; 
#=GS A0A0N9Z1K7/4-212  AC A0A0N9Z1K7
#=GS A0A0N9Z1K7/4-212  OS Candidatus Nitrosocosmicus oleophilus
#=GS A0A0N9Z1K7/4-212  DE Archaeal ammonia monooxygenase subunit A (AmoA)
#=GS A0A0N9Z1K7/4-212  DR ORG; Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Candidatus Nitrosocosmicus; Candidatus Nitrosocosmicus oleophilus; 
#=GS A0A060HNG6/4-212  AC A0A060HNG6
#=GS A0A060HNG6/4-212  OS Nitrososphaera viennensis EN76
#=GS A0A060HNG6/4-212  DE Ammonia monooxygenase subunit A
#=GS A0A060HNG6/4-212  DR ORG; Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera; Nitrososphaera viennensis; 
#=GS A0A484I9U7/4-212  AC A0A484I9U7
#=GS A0A484I9U7/4-212  OS Candidatus Nitrosocosmicus franklandus
#=GS A0A484I9U7/4-212  DE Ammonia monooxygenase subunit A
#=GS A0A484I9U7/4-212  DR ORG; Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Candidatus Nitrosocosmicus; Candidatus Nitrosocosmicus franklandus; 
#=GS W8PTL5/4-210      AC W8PTL5
#=GS W8PTL5/4-210      OS uncultured crenarchaeote
#=GS W8PTL5/4-210      DE Ammonia monooxygenase
#=GS W8PTL5/4-210      DR ORG; Archaea; Crenarchaeota; uncultured crenarchaeote; 
#=GF SQ 8
Q701V3/4-214              -VWLRRTTHYLFIVVVAVNSTLLTINAGDYIFYTDWAWTSFVVFSVSQSTMLVVGAIYYMLFTGVPGTATYYATIMTIYTWVAKGAWFALGYPYDFIVTPVWIPSAMLLDLTYWATRRNKHAAIIIGGTLVGLSLPIFNMINLLLVRDPLEMAFKYPRPTLPPYMTPIEPQVGKFYNSPVALGSGAGAVLSVPIAALGAKLNTWTYRWMAAW
K0ILE5/1-201              ----------MFIVVVAVNSTLLTINAGDYIFYTDWMWTSFVVFSISQSTMLVVGAIYYMLFTGVPGTATYYATIMTIYTWVAKGAWFALGYPYDFIVVPVWIPSAMLLDLTYWATRRNKHAAIIIGGTLVGLSFPLFNMVNLLLVRDPLEVAFKYPRPTLPAYMTPIEPQVGKFYNSPVALGSGAGAVLSVPIAALGAKLNTWTYRWMAA-
A0A0H3W809/4-212          ---LRRTTHYLFIVVVAVNSTLLTINAGDYIFYTDWAWTSFVVFSISQSTMLVVGAIYYMLFTGVPGTATYYATIMTIYTWVAKGAWFALGYPYDFVVVPVWIPSAMLLDLAYWATRRNKHAAILIGGVLVGMSLPLFNMINLLLVADPLEMAFKYPRPTLPPYMTPIEPQVGKFYNSPVALGAGAGAVLCVPIAALGAKLNTWTYRWMAAW
G8GSI4/5-212              ----RRCTHCLFIVVVAVNSTLLTINAGDYIFYTDWMWTSYVIFTLSQSLMLAVGAAYYLTFTGVPGTATYYALIMTVYTWVAKGAWFALGYPMDFITVPVWIPSAMLLDLTYWATRRNKHAAIIIGGVLVGLSLPIFNMINLLLVRDPLEMAFKYPRPTLPPYMTPIEPQVGKFYNSPVALGSGAGAVLSVPIAALGAKLNTWTYRWMAAW
A0A0N9Z1K7/4-212          ---LRRTTHYLFIVVVAVNSTLLTINAGDYIFYTDWAWTSFVVFSISQSTMLVVGAIYYMLFTGVPGTATYYATIMTIYTWVAKGAWFALGYPYDFVVVPVWIPSAMLLDLAYWATRRNKHAAILIGGVLVGMSLPLFNMINLLLVADPLEMAFKYPRPTLPPYMTPIEPQVGKFYNSPVALGAGAGAVLCVPIAALGAKLNTWTYRWMAAW
A0A060HNG6/4-212          ---LRRTTHYIFIVVVAVNSTLLTINAGDYIFYTDWMWTSFVVFSVSQSTMLAVGAVYYMLFTGVPGTATYYATIMTIYTWVAKGAWFALGYPYDFIVVPVWIPSAMLLDLTYWATRRNKHAVIIIGGTLVGLSFPLFNMVNLLLVRDPLEVAFKYPRPTLPAYMTPIEPQVGKFYNSPVALGSGASAVLTVPMTALGAKLNTWTYRWMAAW
A0A484I9U7/4-212          ---LRRTTHYLFIVVVAVNSTLLTINAGDYIFYTDWAWTSFVVFSISQSTMLVVGAIYYMLFTGVPGTATYYATIMTIYTWVAKGAWFALGYPYDFVVVPVWIPSAMLLDLAYWATRRNKHAAILIGGVLVGMSLPLFNMINLLLVADPLEMAFKYPRPTLPPYMTPIEPQVGKFYNSPVALGAGAGAVLCVPIAALGAKLNTWTYRWMAAW
W8PTL5/4-210              MVWLRRTTHYLFIVVVAVNSTLLTINAGDYIFYTDWMWTSFVVFSVSQSTMLAVGAIYYMLFTGVPGTATYYATIMTIYTWVAKGAWFALGYPYDFIVVPIWIPSAMLLDLTYWATRRNKHAAILIGGSLIGLSFPLFNMVNLLLIRDPLEVAFKYPRPTLPAYMTPIEPQVGKFYNSPVALGSGAGAVLTVPIAALGAKLNTWTYR-----
#=GC scorecons            00036646656999999999999999999999999959998979769996995999699769999999999996999799999999999999969977797999999999969999999999796999497979696999699997599996999999999959999999999999999999969979994997799999999999966663
#=GC scorecons_70         __________**************************_********_******_***********************************************************************_***_*****_***********_****_**********_***************************_****************_____
#=GC scorecons_80         ___________*************************_********_***_**_***_***_************_*******************_***_*************_************_***_***_*_*_***_*****_****_**********_********************_******_****************_____
#=GC scorecons_90         ___________*************************_***_*_*__***_**_***_**__************_***_***************_**___*_**********_**********_*_***_*_*_*_*_***_****__****_**********_********************_**_***_**__************_____
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