# STOCKHOLM 1.0
#=GF ID 1.20.140.80/FF/000005
#=GF DE Transcription factor
#=GF AC 1.20.140.80/FF/000005
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 76.579
#=GS Q24318/249-398      AC Q24318
#=GS Q24318/249-398      OS Drosophila melanogaster
#=GS Q24318/249-398      DE Transcription factor Dp
#=GS Q24318/249-398      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q24318/249-398      DR GO; GO:0003677; GO:0005515; GO:0005634; GO:0007113; GO:0007307; GO:0008069; GO:0008134; GO:0008630; GO:0010628; GO:0031523; GO:0035189; GO:0045476; GO:0045850; GO:0048477; GO:0051726; 
#=GS A0A0B4KEQ0/221-370  AC A0A0B4KEQ0
#=GS A0A0B4KEQ0/221-370  OS Drosophila melanogaster
#=GS A0A0B4KEQ0/221-370  DE Transcription factor
#=GS A0A0B4KEQ0/221-370  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS D6WKS8/255-402      AC D6WKS8
#=GS D6WKS8/255-402      OS Tribolium castaneum
#=GS D6WKS8/255-402      DE Transcription factor Dp-like Protein
#=GS D6WKS8/255-402      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS F7A3K9/175-302      AC F7A3K9
#=GS F7A3K9/175-302      OS Macaca mulatta
#=GS F7A3K9/175-302      DE Transcription factor
#=GS F7A3K9/175-302      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS B7PD94/187-305      AC B7PD94
#=GS B7PD94/187-305      OS Ixodes scapularis
#=GS B7PD94/187-305      DE Transcription factor Dp-2, putative
#=GS B7PD94/187-305      DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GS Q290L4/254-403      AC Q290L4
#=GS Q290L4/254-403      OS Drosophila pseudoobscura pseudoobscura
#=GS Q290L4/254-403      DE Transcription factor
#=GS Q290L4/254-403      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A3B0JQM9/220-369  AC A0A3B0JQM9
#=GS A0A3B0JQM9/220-369  OS Drosophila guanche
#=GS A0A3B0JQM9/220-369  DE Transcription factor
#=GS A0A3B0JQM9/220-369  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS A0A3B0J2J7/244-393  AC A0A3B0J2J7
#=GS A0A3B0J2J7/244-393  OS Drosophila guanche
#=GS A0A3B0J2J7/244-393  DE Transcription factor
#=GS A0A3B0J2J7/244-393  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS B4HQ30/251-400      AC B4HQ30
#=GS B4HQ30/251-400      OS Drosophila sechellia
#=GS B4HQ30/251-400      DE Transcription factor
#=GS B4HQ30/251-400      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A0A3B0J6L1/252-401  AC A0A3B0J6L1
#=GS A0A3B0J6L1/252-401  OS Drosophila guanche
#=GS A0A3B0J6L1/252-401  DE Transcription factor
#=GS A0A3B0J6L1/252-401  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS A0A3B0J322/222-371  AC A0A3B0J322
#=GS A0A3B0J322/222-371  OS Drosophila guanche
#=GS A0A3B0J322/222-371  DE Transcription factor
#=GS A0A3B0J322/222-371  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS A0A0Q5VN33/223-372  AC A0A0Q5VN33
#=GS A0A0Q5VN33/223-372  OS Drosophila erecta
#=GS A0A0Q5VN33/223-372  DE Transcription factor
#=GS A0A0Q5VN33/223-372  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS A0A0J9RBQ2/251-400  AC A0A0J9RBQ2
#=GS A0A0J9RBQ2/251-400  OS Drosophila simulans
#=GS A0A0J9RBQ2/251-400  DE Transcription factor
#=GS A0A0J9RBQ2/251-400  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B3NRP0/250-399      AC B3NRP0
#=GS B3NRP0/250-399      OS Drosophila erecta
#=GS B3NRP0/250-399      DE Transcription factor
#=GS B3NRP0/250-399      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS A0A0J9RBR2/250-399  AC A0A0J9RBR2
#=GS A0A0J9RBR2/250-399  OS Drosophila simulans
#=GS A0A0J9RBR2/250-399  DE Transcription factor
#=GS A0A0J9RBR2/250-399  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS A0A0R1DQ88/223-372  AC A0A0R1DQ88
#=GS A0A0R1DQ88/223-372  OS Drosophila yakuba
#=GS A0A0R1DQ88/223-372  DE Transcription factor
#=GS A0A0R1DQ88/223-372  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4P4K7/250-399      AC B4P4K7
#=GS B4P4K7/250-399      OS Drosophila yakuba
#=GS B4P4K7/250-399      DE Transcription factor
#=GS B4P4K7/250-399      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 17
Q24318/249-398              TETFLALEEENCQRRERIKQKNEMLREMIMQHVAFKGLVERNKRNESQGVVP-SPNASIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGFLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGTGKTGENMYES
A0A0B4KEQ0/221-370          TETFLALEEENCQRRERIKQKNEMLREMIMQHVAFKGLVERNKRNESQGVVP-SPNASIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGFLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGTGKTGENMYES
D6WKS8/255-402              LQECMQLEREKLKKIASIREKKKQLQELILNQISFKNLAQRNREMEEINGPP-APSSYIQLPFLIISTNKKTEIDCSISNDKKEYVFKFNDKFEIKDDVEVLKSIGMLMGLESGKCTPENLERIKKMVPKSLESYVDQLAFGAADET--EA
F7A3K9/175-302              AQECQN-----------------------LEQIAFKNLVQRNRHSEQQASQPLPPNLVIHLPFNIINTSKKTIIDCSIYNDNFECLFNFDNTFEIHDDTEALKQMGMACGLESGSCSAEDLKMARSLVRKALEPYVTEMAQGTFSASDLTN
B7PD94/187-305              AQECQK-----------------------LEQIAYKNLVERNKMLEMLKQAP-APYTTIPLPFIIINTNKQTVIDCSISSDKSEYLFNFDNTFEIHDDIEVLKRMGMAFGLDKGTCTPEDLEKAKRMVPKSLEPYIVPSAP--------SH
Q290L4/254-403              AEQFLALEEENSLRRERIKQKNDMLREMIMQHVAFKGLVERNKRNESQGVVP-SANASCQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGFCLGLDKGKCTPENIERVKNWVPPNLAKYVEAYGAGKTGETMYDS
A0A3B0JQM9/220-369          AEQFLALEEENSLRRERIKQKNDMLREMIMQHVAFKGLVERNKRNESQGVVP-SANASCQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGFCLGLDKGECTPENIERVKTWVPPNLAKYVEAYGAGKTGETMYDS
A0A3B0J2J7/244-393          AEQFLALEEENSLRRERIKQKNDMLREMIMQHVAFKGLVERNKRNESQGVVP-SANASCQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGFCLGLDKGECTPENIERVKTWVPPNLAKYVEAYGAGKTGETMYDS
B4HQ30/251-400              AETFLALEEENSQRRERIKQKNEMLREMIMQHVAFKGLVERNKRNESQGVVP-SPNASIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGFLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGTGKTGENMYES
A0A3B0J6L1/252-401          AEQFLALEEENSLRRERIKQKNDMLREMIMQHVAFKGLVERNKRNESQGVVP-SANASCQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGFCLGLDKGECTPENIERVKTWVPPNLAKYVEAYGAGKTGETMYDS
A0A3B0J322/222-371          AEQFLALEEENSLRRERIKQKNDMLREMIMQHVAFKGLVERNKRNESQGVVP-SANASCQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGFCLGLDKGECTPENIERVKTWVPPNLAKYVEAYGAGKTGETMYDS
A0A0Q5VN33/223-372          AETFLALEEENSQRRERIKQKNEMLREMIMQHVAFKGLVERNKRYESQGVVP-SPNASIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGLLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGTGKSGETIYES
A0A0J9RBQ2/251-400          AETFLALEEENSQRRERIKQKNEMLREMIMQHVAFKGLVERNKRNESQGVVP-SPNASIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGFLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGTGKTGENMYES
B3NRP0/250-399              AETFLALEEENSQRRERIKQKNEMLREMIMQHVAFKGLVERNKRYESQGVVP-SPNASIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGLLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGTGKSGETIYES
A0A0J9RBR2/250-399          AETFLALEEENSQRRERIKQKNEMLREMIMQHVAFKGLVERNKRNESQGVVP-SPNASIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGFLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGTGKTGENMYES
A0A0R1DQ88/223-372          AETFLALEEENSQRRERIKQKNEMLREMIMQHVAFKGLVERNKRNESQGVVP-SPNASIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGFLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGSGKTGETMYES
B4P4K7/250-399              AETFLALEEENSQRRERIKQKNEMLREMIMQHVAFKGLVERNKRNESQGVVP-SPNASIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGFLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGSGKTGETMYES
#=GC scorecons              6645444434322322243343224343465677895976997439454449057544669995977959494969974797597696975799679969799679544997594977966755744965595497444636334432344
#=GC scorecons_70           **___________________________*_*****_******__*_____*__*___*_***_****_*_*_*****_***_**_****_************_**___***_*_*******__*__**__*__**_____*_________
#=GC scorecons_80           _________________________________***_**_***__*_____*________***_*_**_*_*_*_**__***_**_*_**_***_***_****_**___***_*_****__*__*__*___*__**_______________
#=GC scorecons_90           __________________________________**_*__**___*_____*________***_*__*_*_*_*_**___*__*__*_*___**__**_*_**__*___**__*_*__*________*___*__*________________
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