# STOCKHOLM 1.0
#=GF ID 1.20.1310.20/FF/000023
#=GF DE Erythrocyte membrane protein 1, PfEMP1
#=GF AC 1.20.1310.20/FF/000023
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 78.904
#=GS Q8I2C4/905-928_967-1161      AC Q8I2C4
#=GS Q8I2C4/905-928_967-1161      OS Plasmodium falciparum 3D7
#=GS Q8I2C4/905-928_967-1161      DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8I2C4/905-928_967-1161      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8I2C4/905-928_967-1161      DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS Q25733/840-926_965-1127      AC Q25733
#=GS Q25733/840-926_965-1127      OS Plasmodium falciparum
#=GS Q25733/840-926_965-1127      DE PfEMP1 variant 1 of strain MC
#=GS Q25733/840-926_965-1127      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q25733/840-926_965-1127      DR GO; GO:0005515; GO:0044228; 
#=GS C6KT15/1211-1306_1337-1449   AC C6KT15
#=GS C6KT15/1211-1306_1337-1449   OS Plasmodium falciparum 3D7
#=GS C6KT15/1211-1306_1337-1449   DE Erythrocyte membrane protein 1, PfEMP1
#=GS C6KT15/1211-1306_1337-1449   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS C6KT15/1211-1306_1337-1449   DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS Q8IAK1/825-1077              AC Q8IAK1
#=GS Q8IAK1/825-1077              OS Plasmodium falciparum 3D7
#=GS Q8IAK1/825-1077              DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IAK1/825-1077              DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IAK1/825-1077              DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS A0A2I0BXS9/905-928_967-1161  AC A0A2I0BXS9
#=GS A0A2I0BXS9/905-928_967-1161  OS Plasmodium falciparum NF54
#=GS A0A2I0BXS9/905-928_967-1161  DE Erythrocyte membrane protein 1
#=GS A0A2I0BXS9/905-928_967-1161  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7KNA7/905-928_967-1161      AC W7KNA7
#=GS W7KNA7/905-928_967-1161      OS Plasmodium falciparum NF54
#=GS W7KNA7/905-928_967-1161      DE Uncharacterized protein
#=GS W7KNA7/905-928_967-1161      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS T1Q351/837-1059              AC T1Q351
#=GS T1Q351/837-1059              OS Plasmodium falciparum
#=GS T1Q351/837-1059              DE Erythrocyte membrane protein 1
#=GS T1Q351/837-1059              DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7K9Q4/1211-1306_1337-1449   AC W7K9Q4
#=GS W7K9Q4/1211-1306_1337-1449   OS Plasmodium falciparum NF54
#=GS W7K9Q4/1211-1306_1337-1449   DE Erythrocyte membrane protein 1
#=GS W7K9Q4/1211-1306_1337-1449   DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BX63/825-1077          AC A0A2I0BX63
#=GS A0A2I0BX63/825-1077          OS Plasmodium falciparum NF54
#=GS A0A2I0BX63/825-1077          DE Erythrocyte membrane protein 1
#=GS A0A2I0BX63/825-1077          DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7KI40/824-1077              AC W7KI40
#=GS W7KI40/824-1077              OS Plasmodium falciparum NF54
#=GS W7KI40/824-1077              DE Uncharacterized protein
#=GS W7KI40/824-1077              DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GF SQ 10
Q8I2C4/905-928_967-1161              --------QTNLTKACQQKY-EKGREKFPNWKCT--------------------------NQGAICVPPRRRKLYIQKLP---DVEFDDKSLRKWFIETAAIETFFLWDRYKKIKAKEKKEKEDAKGQIYESAG---EDDEDKDPQEELQRGDIPDGFLRQMFYTLGDYRDILEGKNDILIGKTGTGSAKDEMADKENKIKEAIKKFF--QNGDSQLPSG---KPGD--ERKKFWEANEKHIWNAMVCALTYEEKTSSASGGEKNT-T
Q25733/840-926_965-1127              -SIVDKALKGKLDDACTLKY---GKTAPTSWKCIPSGNNTTTESTTK---PGAAGTPSGKDTGSICVPPRRRKLYVGKLHDWAGGETTEAKSQEAFVSPPRLRRFLPWHKFKEQWKAQHGAGATGQQTIIGTLD---GGGEE-TPDKLLKTGHIPPDFLRQMFYTLGDYRDILVGNTDIV----VHTSGNKEDMQIMEAIQKKIEQILPTSGSSPSPPRVTQTQHSVENPRKTWWNENGKKIWEGMVCALTYNTDTPSGTAPTQI---
C6KT15/1211-1306_1337-1449           DKLFED--TTTPHAACQQKY-INGHEKFPNWKCV-----------------TPSGEKSG-DKGAICVPPRRRRLYIHDLQSL-DEKPSDTALRDWFVKSAAVETFFLWHRYKKQK------------------------------EKKLAGGKIPDDFLRQMFYTLGDYRDICIGDENVI--KTLKYSGDKD--DIMEKIQEKIKAVFPTSGGTSHIPDV---KPGGALSRGDWWEQHGKDIWHGMICALTYKETSGSGEKGEKTTIT
Q8IAK1/825-1077                      -TLFEK--PENLSDACGLKYGPGGKERYSQWKCIPTKPNSDNKGEVGSAGRVARSAPSG-EKGSICVPPRRRRLYVKDLETLGDSEVTQVQLRDAFIKCAAVETFFLWDRYKKEK--EKKKPQEGVLQLLGTVGTPPTDDEEDPPEKMLQKGEIPEEFKRQMFYTLADYKDILFGDQEVI--KTLKDSGDENIKDISEKIKKTLNGDNNQESGSS--PSL----SGKKTTPKDWWETYGKDIWEGMVCALTYKNSGDKKIEQVKTA-D
A0A2I0BXS9/905-928_967-1161          --------QTNLTKACQQKY-EKGREKFPNWKCT--------------------------NQGAICVPPRRRKLYIQKLP---DVEFDDKSLRKWFIETAAIETFFLWDRYKKIKAKEKKEKEDAKGQIYESAG---EDDEDKDPQEELQRGDIPDGFLRQMFYTLGDYRDILEGKNDILIGKTGTGSAKDEMADKENKIKEAIKKFF--QNGDSQLPSG---KPGD--ERKKFWEANEKHIWNAMVCALTYEEKTSSASGGEKNT-T
W7KNA7/905-928_967-1161              --------QTNLTKACQQKY-EKGREKFPNWKCT--------------------------NQGAICVPPRRRKLYIQKLP---DVEFDDKSLRKWFIETAAIETFFLWDRYKKIKAKEKKEKEDAKGQIYESAG---EDDEDKDPQEELQRGDIPDGFLRQMFYTLGDYRDILEGKNDILIGKTGTGSAKDEMADKENKIKEAIKKFF--QNGDSQLPSG---KPGD--ERKKFWEANEKHIWNAMVCALTYEEKTSSASGGEKNT-T
T1Q351/837-1059                      ----------SLNAACSLKY-VTGKNY--GWRCI-----------------APSGTTSG-KDGAICVPPRRRKLYIQKLP---DVEFDDKSLRKWFIETAAIETFFLWDRYKKIKAKEKKEKEDAKGQIYESAG---EDDEDKDPQEELQRGDIPDGFLRQMFYTLGDYRDILEGKNDILIGKTGTGSAKDEMADKENKIKEAIKKFF--QNGDSQLPSG---KPGD--ERKKFWEANEKHIWNAMVCALTYEEKTSSASGGEKNT-T
W7K9Q4/1211-1306_1337-1449           DKLFED--TTTPHAACQQKY-INGHEKFPNWKCV-----------------TPSGEKSG-DKGAICVPPRRRRLYIHDLQSL-DEKPSDTALRDWFVKSAAVETFFLWHRYKKQK------------------------------EKKLAGGKIPDDFLRQMFYTLGDYRDICIGDENVI--KTLKYSGDKD--DIMEKIQEKIKAVFPTSGGTSHIPDV---KPGGALSRGDWWEQHGKDIWHGMICALTYKETSGSGEKGEKTTIT
A0A2I0BX63/825-1077                  -TLFEK--PENLSDACGLKYGPGGKERYSQWKCIPTKPNSDNKGEVGSAGRVARSAPSG-EKGSICVPPRRRRLYVKDLETLGDSEVTQVQLRDAFIKCAAVETFFLWDRYKKEK--EKKKPQEGVLQLLGTVGTPPTDDEEDPPEKMLQKGEIPEEFKRQMFYTLADYKDILFGDQEVI--KTLKDSGDENIKDISEKIKKTLNGDNNQESGSS--PSL----SGKKTTPKDWWETYGKDIWEGMVCALTYKNSGDKKIEQVKTA-D
W7KI40/824-1077                      KTLFEK--PENLSDACGLKYGPGGKERYSQWKCIPTKPNSDNKGEVGSAGRVARSAPSG-EKGSICVPPRRRRLYVKDLETLGDSEVTQVQLRDAFIKCAAVETFFLWDRYKKEK--EKKKPQEGVLQLLGTVGTPPTDDEEDPPEKMLQKGEIPEEFKRQMFYTLADYKDILFGDQEVI--KTLKDSGDENIKDISEKIKKTLNGDNNQESGSS--PSL----SGKKTTPKDWWETYGKDIWEGMVCALTYKNSGDKKIEQVKTA-D
#=GC scorecons                       0122220033563499449902395644449895100010000000000002323224405496999999996997459412073634534775497547767797795889736114442223322432332400024454225563954949955959999999699799639545660066443965552275367966465434114474722953000357311356459745695995697999995535454344475404
#=GC scorecons_70                    ___________*__**__**___*_*____***_____________________________*_************__*____*_*_____**__**__*********_****_*_________________________________*__*_**__*_*************__*___*___**___*______*___***__*________*_*__*_______*_____*__**___*_**__*******___________*____
#=GC scorecons_80                    ______________**__**___*______***_____________________________*_********_**___*____*________*__*___**_******_****___________________________________*__*_**__*_*******_*****__*____________*______*___**____________*_*__*_______*________**___*_**__*******___________*____
#=GC scorecons_90                    ______________**__**___*______***_____________________________*_********_**___*________________*________*__*__**____________________________________*__*_**__*_*******_**_**__*____________*___________*_________________*________________*____*_**__*_*****________________
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