# STOCKHOLM 1.0
#=GF ID 1.20.1310.20/FF/000018
#=GF DE Erythrocyte membrane protein 1, PfEMP1
#=GF AC 1.20.1310.20/FF/000018
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 72.533
#=GS Q8I643/833-1089          AC Q8I643
#=GS Q8I643/833-1089          OS Plasmodium falciparum 3D7
#=GS Q8I643/833-1089          DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8I643/833-1089          DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8I643/833-1089          DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0046789; GO:0050839; GO:0098609; 
#=GS Q8IBW9/898-1159          AC Q8IBW9
#=GS Q8IBW9/898-1159          OS Plasmodium falciparum 3D7
#=GS Q8IBW9/898-1159          DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IBW9/898-1159          DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IBW9/898-1159          DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS Q8IFQ6/888-1128          AC Q8IFQ6
#=GS Q8IFQ6/888-1128          OS Plasmodium falciparum 3D7
#=GS Q8IFQ6/888-1128          DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IFQ6/888-1128          DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IFQ6/888-1128          DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS Q8IFQ5/888-1120          AC Q8IFQ5
#=GS Q8IFQ5/888-1120          OS Plasmodium falciparum 3D7
#=GS Q8IFQ5/888-1120          DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IFQ5/888-1120          DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IFQ5/888-1120          DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS Q8IFQ4/838-867_910-1100  AC Q8IFQ4
#=GS Q8IFQ4/838-867_910-1100  OS Plasmodium falciparum 3D7
#=GS Q8IFQ4/838-867_910-1100  DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IFQ4/838-867_910-1100  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IFQ4/838-867_910-1100  DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS A0A2I0BZ51/833-1089      AC A0A2I0BZ51
#=GS A0A2I0BZ51/833-1089      OS Plasmodium falciparum NF54
#=GS A0A2I0BZ51/833-1089      DE Erythrocyte membrane protein 1
#=GS A0A2I0BZ51/833-1089      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JRS9/833-1089          AC W7JRS9
#=GS W7JRS9/833-1089          OS Plasmodium falciparum NF54
#=GS W7JRS9/833-1089          DE Uncharacterized protein
#=GS W7JRS9/833-1089          DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BNU6/898-1159      AC A0A2I0BNU6
#=GS A0A2I0BNU6/898-1159      OS Plasmodium falciparum NF54
#=GS A0A2I0BNU6/898-1159      DE Erythrocyte membrane protein 1
#=GS A0A2I0BNU6/898-1159      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JX06/82-343            AC W7JX06
#=GS W7JX06/82-343            OS Plasmodium falciparum NF54
#=GS W7JX06/82-343            DE Uncharacterized protein
#=GS W7JX06/82-343            DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BZX2/888-1128      AC A0A2I0BZX2
#=GS A0A2I0BZX2/888-1128      OS Plasmodium falciparum NF54
#=GS A0A2I0BZX2/888-1128      DE Erythrocyte membrane protein 1
#=GS A0A2I0BZX2/888-1128      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7KK60/495-735           AC W7KK60
#=GS W7KK60/495-735           OS Plasmodium falciparum NF54
#=GS W7KK60/495-735           DE Uncharacterized protein
#=GS W7KK60/495-735           DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GF SQ 11
Q8I643/833-1089                  VEELFKSTKNFEDACGLKYGKN--YGWKCVPTTSDKGSEPTARGHSHVARSADGAPSGDKDGAICIPPRRRKLYLHKIEGV---DTTDDKS-----------------------LRKWFIESAAVETFFLWDRYKKLNTPQSGSPLLGGGLPGVGVENGDD--ENNPEKLLQKGEIPDGFLRQMFYTLGDYRDILFSGDKDKKNGYSDIVSGDNVI----KERENTIKEKIASFF-QNGNKEGTPH--VPKNPVQTPQTWWKDNAKHIWHGMICALTYEEKTSGSDGEKKIEK------D
Q8IBW9/898-1159                  VEQALNNMENLNAACTLKYGPKAPTSWKCIPSGSDS----------------------SSSGAICVPPRRRRLYVGKLEQWANKHNTDASEARGSEAPSPSGTDTHTQPDPQKALLKAFVESAAVETFFLWHRYKEEKKKPQE---GGLPLLGTGDSVDGEEEEQPPQNELNGGKIPNDFLRQMFYTLADYKDILDG-----KNIVADILNGSSGSDKDMVEREKTIKEKIKIFFEQNGNKEAAPRGSTQTQPSEKLKSWWSQNGEYIWKGMVCALTYEENGARGTDGKTTL--------
Q8IFQ6/888-1128                  VKTLFESTKNFEDACRQKYGPKAPTSWKCVPTTGDK----------------DGA-TGKSDGSICVPPRRRRLYVGKLHDWASGNTQEDGKAQ------PQG-DTPSQPDP---LLKAFVESAAVETFFLWDRYKKLNTKRQG---VGAGAPQLQEEDDNDEEEENPQQELEDGTIPDDFLRQMFYTFGDYRDIFFG---------NNIGSGNDVE---------KVKPNIDKVF-ENSEKPTSGG----HNSEQQRETWWEEYGPHIWDGMICALSYNTK------DKEIIKLAHHNLT
Q8IFQ5/888-1120                  VKTLFESTKNFEDACRQKYGPKAPTSWKCVPTTGDK----------------DGA-TGKSDGSICVPPRRRRLYIHKVDD----NVKDDAS-----------------------LRKWFIESSAVETFFLWHEYK-MEKKRED---IEKQKANEKVVDTSNVGEELQNDLEGNGTIPEEFKRQMFYTLGDYKDIFEG---------KSIEVGDEKDKQKMKEIEKKIQAHINSGS-SSPPHGTPGQ---PNSVTTPQQTWWSRNAPSIWKGMICALTYKEDGEKSTDDKTTLK------R
Q8IFQ4/838-867_910-1100          VKTLFESTKNFEDACPTKYGPKAPTSWKCI-----------------------------TGGSVCVPPRRRRLYIHKVDD----NVKDDAS-----------------------LRKWFIESSAVETFFLWHEYK-MEKKRED---IEKQKANEKVVDTSNVGEELQNDLEGNGTIPEEFKRQMFYTLGDYKDIFEG---------KSIEVGDEKDKQKMKEIEKKIQAHINSGS-SSPPHGTPGQ---PNSVTTPQQTWWSRNAPSIWKGMICALTYKEDGEKSTDDKTTLK------R
A0A2I0BZ51/833-1089              VEELFKSTKNFEDACGLKYGKN--YGWKCVPTTSDKGSEPTARGHSHVARSADGAPSGDKDGAICIPPRRRKLYLHKIEGV---DTTDDKS-----------------------LRKWFIESAAVETFFLWDRYKKLNTPQSGSPLLGGGLPGVGVENGDD--ENNPEKLLQKGEIPDGFLRQMFYTLGDYRDILFSGDKDKKNGYSDIVSGDNVI----KERENTIKEKIASFF-QNGNKEGTPH--VPKNPVQTPQTWWKDNAKHIWHGMICALTYEEKTSGSDGEKKIEK------D
W7JRS9/833-1089                  VEELFKSTKNFEDACGLKYGKN--YGWKCVPTTSDKGSEPTARGHSHVARSADGAPSGDKDGAICIPPRRRKLYLHKIEGV---DTTDDKS-----------------------LRKWFIESAAVETFFLWDRYKKLNTPQSGSPLLGGGLPGVGVENGDD--ENNPEKLLQKGEIPDGFLRQMFYTLGDYRDILFSGDKDKKNGYSDIVSGDNVI----KERENTIKEKIASFF-QNGNKEGTPH--VPKNPVQTPQTWWKDNAKHIWHGMICALTYEEKTSGSDGEKKIEK------D
A0A2I0BNU6/898-1159              VEQALNNMENLNAACTLKYGPKAPTSWKCIPSGSDS----------------------SSSGAICVPPRRRRLYVGKLEQWANKHNTDASEARGSEAPSPSGTDTHTQPDPQKALLKAFVESAAVETFFLWHRYKEEKKKPQE---GGLPLLGTGDSVDGEEEEQPPQNELNGGKIPNDFLRQMFYTLADYKDILDG-----KNIVADILNGSSGSDKDMVEREKTIKEKIKIFFEQNGNKEAAPRGSTQTQPSEKLKSWWSQNGEYIWKGMVCALTYEENGARGTDGKTTL--------
W7JX06/82-343                    VEQALNNMENLNAACTLKYGPKAPTSWKCIPSGSDS----------------------SSSGAICVPPRRRRLYVGKLEQWANKHNTDASEARGSEAPSPSGTDTHTQPDPQKALLKAFVESAAVETFFLWHRYKEEKKKPQE---GGLPLLGTGDSVDGEEEEQPPQNELNGGKIPNDFLRQMFYTLADYKDILDG-----KNIVADILNGSSGSDKDMVEREKTIKEKIKIFFEQNGNKEAAPRGSTQTQPSEKLKSWWSQNGEYIWKGMVCALTYEENGARGTDGKTTL--------
A0A2I0BZX2/888-1128              VKTLFESTKNFEDACRQKYGPKAPTSWKCVPTTGDK----------------DGA-TGKSDGSICVPPRRRRLYVGKLHDWASGNTQEDGKAQ------PQG-DTPSQPDP---LLKAFVESAAVETFFLWDRYKKLNTKRQG---VGAGAPQLQEEDDNDEEEENPQQELEDGTIPDDFLRQMFYTFGDYRDIFFG---------NNIGSGNDVE---------KVKPNIDKVF-ENSEKPTSGG----HNSEQQRETWWEEYGPHIWDGMICALSYNTK------DKEIIKLAHHNLT
W7KK60/495-735                   VKTLFESTKNFEDACRQKYGPKAPTSWKCVPTTGDK----------------DGA-TGKSDGSICVPPRRRRLYVGKLHDWASGNTQEDGKAQ------PQG-DTPSQPDP---LLKAFVESAAVETFFLWDRYKKLNTKRQG---VGAGAPQLQEEDDNDEEEENPQQELEDGTIPDDFLRQMFYTFGDYRDIFFG---------NNIGSGNDVE---------KVKPNIDKVF-ENSEKPTSGG----HNSEQQRETWWEEYGPHIWDGMICALSYNTK------DKEIIKLAHHNLT
#=GC scorecons                   964665666966699449995644569997754474000000000000000033302335596897999997996595542211554764421000000212022112222000949497997999999995699345554550003734454344445462395465446449499659699999966997996360000022114593495443111124243577459444605754745454001345535335699446645994997999695653223235946440000002
#=GC scorecons_70                *___*_******_**__***_*___******___*__________________________*_***********__*__________*__________________________*_*_*************_***____________*_______________*__*______*_**__*_**************_*___________*__*______________**__*___*__*__*_________________***______**_********__________*___________
#=GC scorecons_80                *________*___**__***______***________________________________*_***********__*__________*__________________________*_*_*_**_********__**____________________________*_________*_**__*_******__**_**______________*__*______________**__*____________________________**______**_******_*__________*___________
#=GC scorecons_90                *________*___**__***______***________________________________*_**_*****_**__*_____________________________________*_*_*_**_********__**____________________________*_________*_**__*_******__**_**______________*__*__________________*____________________________**______**_**_***_*__________*___________
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