# STOCKHOLM 1.0
#=GF ID 1.20.1310.20/FF/000014
#=GF DE Erythrocyte membrane protein 1, PfEMP1
#=GF AC 1.20.1310.20/FF/000014
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 76.409
#=GS Q8I640/94-281      AC Q8I640
#=GS Q8I640/94-281      OS Plasmodium falciparum 3D7
#=GS Q8I640/94-281      DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8I640/94-281      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8I640/94-281      DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0046789; GO:0050839; GO:0098609; 
#=GS Q8IFQ6/95-281      AC Q8IFQ6
#=GS Q8IFQ6/95-281      OS Plasmodium falciparum 3D7
#=GS Q8IFQ6/95-281      DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IFQ6/95-281      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IFQ6/95-281      DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS Q8IK37/84-271      AC Q8IK37
#=GS Q8IK37/84-271      OS Plasmodium falciparum 3D7
#=GS Q8IK37/84-271      DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IK37/84-271      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IK37/84-271      DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0046789; GO:0050839; GO:0098609; 
#=GS Q8IFQ5/95-281      AC Q8IFQ5
#=GS Q8IFQ5/95-281      OS Plasmodium falciparum 3D7
#=GS Q8IFQ5/95-281      DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IFQ5/95-281      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IFQ5/95-281      DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS C6KSK8/76-259      AC C6KSK8
#=GS C6KSK8/76-259      OS Plasmodium falciparum 3D7
#=GS C6KSK8/76-259      DE Erythrocyte membrane protein 1, PfEMP1
#=GS C6KSK8/76-259      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS C6KSK8/76-259      DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS Q8IFQ2/83-278      AC Q8IFQ2
#=GS Q8IFQ2/83-278      OS Plasmodium falciparum 3D7
#=GS Q8IFQ2/83-278      DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IFQ2/83-278      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IFQ2/83-278      DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS A0A2I0BZX2/95-281  AC A0A2I0BZX2
#=GS A0A2I0BZX2/95-281  OS Plasmodium falciparum NF54
#=GS A0A2I0BZX2/95-281  DE Erythrocyte membrane protein 1
#=GS A0A2I0BZX2/95-281  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BZN1/94-281  AC A0A2I0BZN1
#=GS A0A2I0BZN1/94-281  OS Plasmodium falciparum NF54
#=GS A0A2I0BZN1/94-281  DE Erythrocyte membrane protein 1
#=GS A0A2I0BZN1/94-281  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JR38/94-281      AC W7JR38
#=GS W7JR38/94-281      OS Plasmodium falciparum NF54
#=GS W7JR38/94-281      DE Uncharacterized protein
#=GS W7JR38/94-281      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BQ91/76-259  AC A0A2I0BQ91
#=GS A0A2I0BQ91/76-259  OS Plasmodium falciparum NF54
#=GS A0A2I0BQ91/76-259  DE Erythrocyte membrane protein 1
#=GS A0A2I0BQ91/76-259  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JX52/76-259      AC W7JX52
#=GS W7JX52/76-259      OS Plasmodium falciparum NF54
#=GS W7JX52/76-259      DE Uncharacterized protein
#=GS W7JX52/76-259      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BR82/84-271  AC A0A2I0BR82
#=GS A0A2I0BR82/84-271  OS Plasmodium falciparum NF54
#=GS A0A2I0BR82/84-271  DE Erythrocyte membrane protein 1
#=GS A0A2I0BR82/84-271  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7K594/84-271      AC W7K594
#=GS W7K594/84-271      OS Plasmodium falciparum NF54
#=GS W7K594/84-271      DE Uncharacterized protein
#=GS W7K594/84-271      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JZH2/83-278      AC W7JZH2
#=GS W7JZH2/83-278      OS Plasmodium falciparum NF54
#=GS W7JZH2/83-278      DE Uncharacterized protein
#=GS W7JZH2/83-278      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GF SQ 14
Q8I640/94-281              ---C---DNRLG-NLYSEESASQCSTSRISG-------NNSDSGSCAPYRKLQLCDYNLEKITDANV--TNTHNLLVDVLLAAKHEGDSLSKYMKENPKIIPK--SNVCTVLARSFADIGDIIRGKDLYVGNRKE-KEKEKLQKNLKNIFAKIHSGLTKKGAEARYKDNDENYYQLREDWWEANRAKVWEAMTCSV-----EDAYYFRQTCG--
Q8IFQ6/95-281              -------GKGEDVSRFSDKEGAQCANSKIHGN-----SKGSNGGACAPLRRLHLCNKNMEKIATS----TAKHDLLVDVCMAANYEAQSLIRDHPQHKRTNPD--SKICTELARSFADIGDIVRGRDLYRGNKKENKQREKLEENLRKIFENIYEGLSNNGVKARYEGDKENFYQLREDWWALNRDQVWKALTCSDDL---KDASYFR------
Q8IK37/84-271              ---C---GKGKE-HRFSKERGAECDDNKIEGNVRSKGKGGKSAGACAPYRRLSLCNKNFPNMNSKDS-LKAKNDLLVDVCYAAKYEAESLIPYHDQYKLTYGD--SQICTVLARSFADIGDIVRGKDLFLGHN---QRKKKLEERLEQMFKNIT---HSNAAKLS----VLSSKEIREYWWALNRDQVWKALTCDEENKLGGNA-YFHA-----
Q8IFQ5/95-281              -------GKGEDVSRFSDKEGAQCANSKIHGN-----SKGSNGGACAPLRRLHLCNKNMEKIATS----TAKHDLLVDVCMAANYEAQSLIRDHPQHKRTNPD--SKICTELARSFADIGDIVRGRDLYRGNKKENKQREKLEENLRKIFENIYEGLSNNGVKARYEGDKENFYQLREDWWALNRDQVWKALTCSDDL---KDASYFR------
C6KSK8/76-259              --PC---GNRQT-VRFSDEYGGQCTFNRIKDS----EHNNNDVGACAPFRRLHLCDYNLEKMGSTKI--KDKNVLLAEVCMAAKYEGQSLLKQYEEHKNNYPH--TNICTVLARSFADIGDIVRGKDLFLGHQ---QRKRKLEENLKQMFENI----KKNNDKLD----KISIEQVREYWWNANRDQVWEAITCHAAH---SDE-YFRKSTD-G
Q8IFQ2/83-278              RQPCKKDTNGNDVERFSVKQQAEYDNKKMKCS---NGSNGKNEGACASFRRLNLCNKNMENMDTNNNDGKAKHNLLAEVCLAAKYEGDSLKHYSKKLNLTYTDSPSQLCTELARSFADIGDIVRGKDLFLGHK---QRKKELEKRLVEMFKNI----QGNNSKLR----TLSLNHVREYWWALNRDQVWKAITCDADT---GNA-YFRTTCSDS
A0A2I0BZX2/95-281          -------GKGEDVSRFSDKEGAQCANSKIHGN-----SKGSNGGACAPLRRLHLCNKNMEKIATS----TAKHDLLVDVCMAANYEAQSLIRDHPQHKRTNPD--SKICTELARSFADIGDIVRGRDLYRGNKKENKQREKLEENLRKIFENIYEGLSNNGVKARYEGDKENFYQLREDWWALNRDQVWKALTCSDDL---KDASYFR------
A0A2I0BZN1/94-281          ---C---DNRLG-NLYSEESASQCSTSRISG-------NNSDSGSCAPYRKLQLCDYNLEKITDANV--TNTHNLLVDVLLAAKHEGDSLSKYMKENPKIIPK--SNVCTVLARSFADIGDIIRGKDLYVGNRKE-KEKEKLQKNLKNIFAKIHSGLTKKGAEARYKDNDENYYQLREDWWEANRAKVWEAMTCSV-----EDAYYFRQTCG--
W7JR38/94-281              ---C---DNRLG-NLYSEESASQCSTSRISG-------NNSDSGSCAPYRKLQLCDYNLEKITDANV--TNTHNLLVDVLLAAKHEGDSLSKYMKENPKIIPK--SNVCTVLARSFADIGDIIRGKDLYVGNRKE-KEKEKLQKNLKNIFAKIHSGLTKKGAEARYKDNDENYYQLREDWWEANRAKVWEAMTCSV-----EDAYYFRQTCG--
A0A2I0BQ91/76-259          --PC---GNRQT-VRFSDEYGGQCTFNRIKDS----EHNNNDVGACAPFRRLHLCDYNLEKMGSTKI--KDKNVLLAEVCMAAKYEGQSLLKQYEEHKNNYPH--TNICTVLARSFADIGDIVRGKDLFLGHQ---QRKRKLEENLKQMFENI----KKNNDKLD----KISIEQVREYWWNANRDQVWEAITCHAAH---SDE-YFRKSTD-G
W7JX52/76-259              --PC---GNRQT-VRFSDEYGGQCTFNRIKDS----EHNNNDVGACAPFRRLHLCDYNLEKMGSTKI--KDKNVLLAEVCMAAKYEGQSLLKQYEEHKNNYPH--TNICTVLARSFADIGDIVRGKDLFLGHQ---QRKRKLEENLKQMFENI----KKNNDKLD----KISIEQVREYWWNANRDQVWEAITCHAAH---SDE-YFRKSTD-G
A0A2I0BR82/84-271          ---C---GKGKE-HRFSKERGAECDDNKIEGNVRSKGKGGKSAGACAPYRRLSLCNKNFPNMNSKDS-LKAKNDLLVDVCYAAKYEAESLIPYHDQYKLTYGD--SQICTVLARSFADIGDIVRGKDLFLGHN---QRKKKLEERLEQMFKNIT---HSNAAKLS----VLSSKEIREYWWALNRDQVWKALTCDEENKLGGNA-YFHA-----
W7K594/84-271              ---C---GKGKE-HRFSKERGAECDDNKIEGNVRSKGKGGKSAGACAPYRRLSLCNKNFPNMNSKDS-LKAKNDLLVDVCYAAKYEAESLIPYHDQYKLTYGD--SQICTVLARSFADIGDIVRGKDLFLGHN---QRKKKLEERLEQMFKNIT---HSNAAKLS----VLSSKEIREYWWALNRDQVWKALTCDEENKLGGNA-YFHA-----
W7JZH2/83-278              RQPCKKDTNGNDVERFSVKQQAEYDNKKMKCS---NGSNGKNEGACASFRRLNLCNKNMENMDTNNNDGKAKHNLLAEVCLAAKYEGDSLKHYSKKLNLTYTDSPSQLCTELARSFADIGDIVRGKDLFLGHK---QRKKELEKRLVEMFKNI----QGNNSKLR----TLSLNHVREYWWALNRDQVWKAITCDADT---GNA-YFRTTCSDS
#=GC scorecons             0005000565341367946355674357745300001255453969975979499649566644432005566499679659977965993444454535455007569959999999999979979974965110657579766944694691011346446551001336336599599559967996959944320004660997211100
#=GC scorecons_70          _______________**_*___**___**______________*****_***_***_*_***_________*__*****__*****__**_______________*_***_******************_*_____*_*_***__*__**_**______*__*___________*_**_**__******_*_**________**_***______
#=GC scorecons_80          _______________**______*____*______________*_***_***_**__*________________**_**__**_**__**__________________**_******************_*_______*_**___*___*__*_______________________**_**__**__**_*_**___________***______
#=GC scorecons_90          ________________*__________________________*_**__*_*_**__*________________**__*__**__*__**__________________**_***********_**_**__*__________*___*___*__*_______________________**_**__**__**_*_**___________**_______
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