# STOCKHOLM 1.0 #=GF ID 1.20.1310.20/FF/000012 #=GF DE Erythrocyte membrane protein 1, PfEMP1 #=GF AC 1.20.1310.20/FF/000012 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 80.147 #=GS Q8IIZ5/892-1022_1072-1179 AC Q8IIZ5 #=GS Q8IIZ5/892-1022_1072-1179 OS Plasmodium falciparum 3D7 #=GS Q8IIZ5/892-1022_1072-1179 DE Erythrocyte membrane protein 1, PfEMP1 #=GS Q8IIZ5/892-1022_1072-1179 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS Q8IIZ5/892-1022_1072-1179 DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0046789; GO:0050839; GO:0098609; #=GS Q8IBX3/895-1162 AC Q8IBX3 #=GS Q8IBX3/895-1162 OS Plasmodium falciparum 3D7 #=GS Q8IBX3/895-1162 DE Erythrocyte membrane protein 1, PfEMP1 #=GS Q8IBX3/895-1162 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS Q8IBX3/895-1162 DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; #=GS Q8I519/1043-1138_1178-1335 AC Q8I519 #=GS Q8I519/1043-1138_1178-1335 OS Plasmodium falciparum 3D7 #=GS Q8I519/1043-1138_1178-1335 DE Erythrocyte membrane protein 1, PfEMP1 #=GS Q8I519/1043-1138_1178-1335 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS Q8I519/1043-1138_1178-1335 DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0046789; GO:0050839; GO:0098609; #=GS Q8I5L5/962-1205 AC Q8I5L5 #=GS Q8I5L5/962-1205 OS Plasmodium falciparum 3D7 #=GS Q8I5L5/962-1205 DE Erythrocyte membrane protein 1, PfEMP1 #=GS Q8I5L5/962-1205 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS Q8I5L5/962-1205 DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0046789; GO:0050839; GO:0098609; #=GS Q8IFK7/837-1084 AC Q8IFK7 #=GS Q8IFK7/837-1084 OS Plasmodium falciparum 3D7 #=GS Q8IFK7/837-1084 DE Erythrocyte membrane protein 1, PfEMP1 #=GS Q8IFK7/837-1084 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS Q8IFK7/837-1084 DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; #=GS Q8IBX2/921-985_1022-1198 AC Q8IBX2 #=GS Q8IBX2/921-985_1022-1198 OS Plasmodium falciparum 3D7 #=GS Q8IBX2/921-985_1022-1198 DE Erythrocyte membrane protein 1, PfEMP1 #=GS Q8IBX2/921-985_1022-1198 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS Q8IBX2/921-985_1022-1198 DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; #=GS A0A2I0C0A6/892-1022_1072-1179 AC A0A2I0C0A6 #=GS A0A2I0C0A6/892-1022_1072-1179 OS Plasmodium falciparum NF54 #=GS A0A2I0C0A6/892-1022_1072-1179 DE Erythrocyte membrane protein 1 #=GS A0A2I0C0A6/892-1022_1072-1179 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS W7K5P3/892-1022_1072-1179 AC W7K5P3 #=GS W7K5P3/892-1022_1072-1179 OS Plasmodium falciparum NF54 #=GS W7K5P3/892-1022_1072-1179 DE Uncharacterized protein #=GS W7K5P3/892-1022_1072-1179 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS A0A2I0BPA2/895-1162 AC A0A2I0BPA2 #=GS A0A2I0BPA2/895-1162 OS Plasmodium falciparum NF54 #=GS A0A2I0BPA2/895-1162 DE Erythrocyte membrane protein 1 #=GS A0A2I0BPA2/895-1162 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS W7KJ36/895-1162 AC W7KJ36 #=GS W7KJ36/895-1162 OS Plasmodium falciparum NF54 #=GS W7KJ36/895-1162 DE Uncharacterized protein #=GS W7KJ36/895-1162 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS W7JQ82/363-458_498-656 AC W7JQ82 #=GS W7JQ82/363-458_498-656 OS Plasmodium falciparum NF54 #=GS W7JQ82/363-458_498-656 DE Uncharacterized protein #=GS W7JQ82/363-458_498-656 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS A0A2I0BZI3/837-1084 AC A0A2I0BZI3 #=GS A0A2I0BZI3/837-1084 OS Plasmodium falciparum NF54 #=GS A0A2I0BZI3/837-1084 DE Erythrocyte membrane protein 1 #=GS A0A2I0BZI3/837-1084 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS W7KBF9/837-1084 AC W7KBF9 #=GS W7KBF9/837-1084 OS Plasmodium falciparum NF54 #=GS W7KBF9/837-1084 DE Uncharacterized protein #=GS W7KBF9/837-1084 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS A0A2I0BY50/962-1205 AC A0A2I0BY50 #=GS A0A2I0BY50/962-1205 OS Plasmodium falciparum NF54 #=GS A0A2I0BY50/962-1205 DE Erythrocyte membrane protein 1 #=GS A0A2I0BY50/962-1205 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS W7KCU5/318-561 AC W7KCU5 #=GS W7KCU5/318-561 OS Plasmodium falciparum NF54 #=GS W7KCU5/318-561 DE Uncharacterized protein #=GS W7KCU5/318-561 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS W7JX00/921-985_1022-1198 AC W7JX00 #=GS W7JX00/921-985_1022-1198 OS Plasmodium falciparum NF54 #=GS W7JX00/921-985_1022-1198 DE Uncharacterized protein #=GS W7JX00/921-985_1022-1198 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GF SQ 16 Q8IIZ5/892-1022_1072-1179 --DNLFSNPEQFKD-ACGL---KYGPKAP-TSWKCVTPSGKPGEAPSGDSTATG--------------------------SSGSICVPPRRRRLYVTPLTRLAGDNTAASVSPQVRGETPLASTSASTPSGSHRDPLLAAFVESAAIETFFLWDRYKKEWEAQKQ-------------------------------KSGDIPPPFLRQMFYTIADYKDILYSGSNDDNTKSSTYNDILKGDKEMKAKEEKIKEAIQKFFENGDKK-PD-------GGTTPSSWWNNNAKHIWNGMICALTYTDNTN--GGPPT------ Q8IBX3/895-1162 --SKLFQNPNNFSD-ACTL---KYVTGKN-YGWKCVSSGNGTTSSEGR-------------------SPRVARSAPSGD-KDGAICVPPRRRRLYVGRLTKWA--ESKQVTQPQEDGKAPLAPT-PPTSSGSQSDPLLTAFVESAAIETFFLWHKYKVDKIREEKEQQE-----------LFTNTSTLGKELQDKLERGNIPTDFLRQMFYTLGDYRDILFSGSKD---AKNGVNDIFSGDKEMKEKEEKIKGAIQTFFENGASQ-PPSGK----RNDKHEEWWKNHGEHIWNGMICALTYKDNDAKGQTPTQIQEV-- Q8I519/1043-1138_1178-1335 --------TTALQD-ACNL---KYVKGKN-YGWRCVAPSHTTSETTGKSESATSSSGATTAPAPSLTSPQATASANSANSVSSAVCIPPRRRRLYVGKLEQWA--SGGN-----------------------------TQFIQSAAIETFFLWHKYKMEKKKEKEETQGQ----------VYKQTDDEDKTPQELLNSGKIPDGFLRQMFYTLADYKDILFSGDKD---KKNGYSDIINGDKEMKAKEEKIKEAIQKFFEQTRGA-IPPPP----SGTTPSSWWEQHAESIWNGMICALTYTDNSD--TVAKGKASIT- Q8I5L5/962-1205 --------QRNKRD--------------------LATPSAKSGDTTGGKDGATGK-------------------------SDGSICVPPRRRRLYIQKLHDWAEKVGDTATQPQV--DTP-----------SQSDKLRDAFIESAAVETFFLWHRYKKIKDKEKLEEQQRQREN-GELPGLSSSGDGDSNDPQSKLEKGEIPDGFLRQMFYTLADYKDILYSGSND-NTKSSTYNDIINGDKEIQEREKDIKGAISTYFSNSGTT-PTPPVKP--SVTTPQTWWELHGPHIWNGMICALTYKENGI--DKPEVDTAV-- Q8IFK7/837-1084 IVDKLFS-GNDFGD-ACGTKYDKYGKEKF-PNWKCISDSTTKSGAPVK--------------------------------SGGSVCVPPRRRKLYIHDLQSLG--VEVD--------KAP-----------SQED-LLKWFVKSAAVETFFLWDRYKKENTKRQSGSP---------LPLLEG-AGGGEETPETSLKNGTIPLPFLRQMFYTLADYKDILFSGDKDDNTKSSTYHDILKGDKEIKGREEKIQEQLKKFFQNSGNQSPPSGTLPPNSVKDPSSWWKENAQHIWNGMICALTYKEIEV--KNPDGKNTY-- Q8IBX2/921-985_1022-1198 ----------NFKEVACQQ---KYAKNNSRLGWKCIA-SDTKSVATVKSD------------------------------ASGSICVPPRRRRLYVGHLQKWA--EKYN-----------------------------KVFVESAAIETFFLWDRYKKIKEKEKQEEQQRQQENGGRLATLNGDTLSVEQTPENQLKSGIIPNDFLRLMFYTLADYKDILFSGSKDDNTKSSTYNDIISGDKEIAQREKTIKGAISTYFSNSGTT-PTPVTQPSGQKTTPKDWWKENAKHIWEGMICALTYKESENGDKTIEKDEQVY- A0A2I0C0A6/892-1022_1072-1179 --DNLFSNPEQFKD-ACGL---KYGPKAP-TSWKCVTPSGKPGEAPSGDSTATG--------------------------SSGSICVPPRRRRLYVTPLTRLAGDNTAASVSPQVRGETPLASTSASTPSGSHRDPLLAAFVESAAIETFFLWDRYKKEWEAQKQ-------------------------------KSGDIPPPFLRQMFYTIADYKDILYSGSNDDNTKSSTYNDILKGDKEMKAKEEKIKEAIQKFFENGDKK-PD-------GGTTPSSWWNNNAKHIWNGMICALTYTDNTN--GGPPT------ W7K5P3/892-1022_1072-1179 --DNLFSNPEQFKD-ACGL---KYGPKAP-TSWKCVTPSGKPGEAPSGDSTATG--------------------------SSGSICVPPRRRRLYVTPLTRLAGDNTAASVSPQVRGETPLASTSASTPSGSHRDPLLAAFVESAAIETFFLWDRYKKEWEAQKQ-------------------------------KSGDIPPPFLRQMFYTIADYKDILYSGSNDDNTKSSTYNDILKGDKEMKAKEEKIKEAIQKFFENGDKK-PD-------GGTTPSSWWNNNAKHIWNGMICALTYTDNTN--GGPPT------ A0A2I0BPA2/895-1162 --SKLFQNPNNFSD-ACTL---KYVTGKN-YGWKCVSSGNGTTSSEGR-------------------SPRVARSAPSGD-KDGAICVPPRRRRLYVGRLTKWA--ESKQVTQPQEDGKAPLAPT-PPTSSGSQSDPLLTAFVESAAIETFFLWHKYKVDKIREEKEQQE-----------LFTNTSTLGKELQDKLERGNIPTDFLRQMFYTLGDYRDILFSGSKD---AKNGVNDIFSGDKEMKEKEEKIKGAIQTFFENGASQ-PPSGK----RNDKHEEWWKNHGEHIWNGMICALTYKDNDAKGQTPTQIQEV-- W7KJ36/895-1162 --SKLFQNPNNFSD-ACTL---KYVTGKN-YGWKCVSSGNGTTSSEGR-------------------SPRVARSAPSGD-KDGAICVPPRRRRLYVGRLTKWA--ESKQVTQPQEDGKAPLAPT-PPTSSGSQSDPLLTAFVESAAIETFFLWHKYKVDKIREEKEQQE-----------LFTNTSTLGKELQDKLERGNIPTDFLRQMFYTLGDYRDILFSGSKD---AKNGVNDIFSGDKEMKEKEEKIKGAIQTFFENGASQ-PPSGK----RNDKHEEWWKNHGEHIWNGMICALTYKDNDAKGQTPTQIQEV-- W7JQ82/363-458_498-656 --------TTALQD-ACNL---KYVKGKN-YGWRCVAPSHTTSETTGKSESATSSSGATTAPAPSLTSPQATASANSANSVSSAVCIPPRRRRLYVGKLEQWA--SGGN-----------------------------TQFIQSAAIETFFLWHKYKMEKKKEKEETQGQ----------VYKQTDDEDKTPQELLNSGKIPDGFLRQMFYTLADYKDILFSGDKD---KKNGYSDIINGDKEMKAKEEKIKEAIQKFFEQTRGA-IPPPP----SGTTPSSWWEQHAESIWNGMICALTYTDNSD--TVAKGKASITQ A0A2I0BZI3/837-1084 IVDKLFS-GNDFGD-ACGTKYDKYGKEKF-PNWKCISDSTTKSGAPVK--------------------------------SGGSVCVPPRRRKLYIHDLQSLG--VEVD--------KAP-----------SQED-LLKWFVKSAAVETFFLWDRYKKENTKRQSGSP---------LPLLEG-AGGGEETPETSLKNGTIPLPFLRQMFYTLADYKDILFSGDKDDNTKSSTYHDILKGDKEIKGREEKIQEQLKKFFQNSGNQSPPSGTLPPNSVKDPSSWWKENAQHIWNGMICALTYKEIEV--KNPDGKNTY-- W7KBF9/837-1084 IVDKLFS-GNDFGD-ACGTKYDKYGKEKF-PNWKCISDSTTKSGAPVK--------------------------------SGGSVCVPPRRRKLYIHDLQSLG--VEVD--------KAP-----------SQED-LLKWFVKSAAVETFFLWDRYKKENTKRQSGSP---------LPLLEG-AGGGEETPETSLKNGTIPLPFLRQMFYTLADYKDILFSGDKDDNTKSSTYHDILKGDKEIKGREEKIQEQLKKFFQNSGNQSPPSGTLPPNSVKDPSSWWKENAQHIWNGMICALTYKEIEV--KNPDGKNTY-- A0A2I0BY50/962-1205 --------QRNKRD--------------------LATPSAKSGDTTGGKDGATGK-------------------------SDGSICVPPRRRRLYIQKLHDWAEKVGDTATQPQV--DTP-----------SQSDKLRDAFIESAAVETFFLWHRYKKIKDKEKLEEQQRQREN-GELPGLSSSGDGDSNDPQSKLEKGEIPDGFLRQMFYTLADYKDILYSGSND-NTKSSTYNDIINGDKEIQEREKDIKGAISTYFSNSGTT-PTPPVKP--SVTTPQTWWELHGPHIWNGMICALTYKENGI--DKPEVDTAV-- W7KCU5/318-561 --------QRNKRD--------------------LATPSAKSGDTTGGKDGATGK-------------------------SDGSICVPPRRRRLYIQKLHDWAEKVGDTATQPQV--DTP-----------SQSDKLRDAFIESAAVETFFLWHRYKKIKDKEKLEEQQRQREN-GELPGLSSSGDGDSNDPQSKLEKGEIPDGFLRQMFYTLADYKDILYSGSND-NTKSSTYNDIINGDKEIQEREKDIKGAISTYFSNSGTT-PTPPVKP--SVTTPQTWWELHGPHIWNGMICALTYKENGI--DKPEVDTAV-- W7JX00/921-985_1022-1198 ----------NFKEVACQQ---KYAKNNSRLGWKCIA-SDTKSVATVKSD------------------------------ASGSICVPPRRRRLYVGHLQKWA--EKYN-----------------------------KVFVESAAIETFFLWDRYKKIKEKEKQEEQQRQQENGGRLATLNGDTLSVEQTPENQLKSGIIPNDFLRLMFYTLADYKDILFSGSKDDNTKSSTYNDIISGDKEIAQREKTIKGAISTYFSNSGTT-PTPVTQPSGQKTTPKDWWKENAKHIWEGMICALTYKESENGDKTIEKDEQVY- #=GC scorecons 0011221133454805523000553323202355655373445454451212210000000000000000000000000045767989999979974494457003424111221012341101000101143241434497699979999995799545355634241100000002104221323233344225549399349997999977997999799669244656666995499996647965976675579575444074322020043557449954664799799999999575430033633222300 #=GC scorecons_70 _____________*____________________*___*___________________________________________**************__*___*_____________________________________*************_***_________________________________________*_**__*******************_**___*_*_*_**__*****__***_**_**__**_*_____*____________*__**___*_************_*________________ #=GC scorecons_80 _____________*________________________*___________________________________________*_************__*___*_____________________________________**_**********_***_________________________________________*_**__*******************__*_________**__****____*__**__*__**_*_____________________**_____************__________________ #=GC scorecons_90 _____________*_______________________________________________________________________*_*****_**___*_________________________________________*__***_******__**_________________________________________*_**__***_****__**_***_**__*_________**__****____*__*_______*_______________________**______**_********__________________ //