# STOCKHOLM 1.0 #=GF ID 1.20.1300.20/FF/000005 #=GF DE Ubiquitin thioesterase otubain-like #=GF AC 1.20.1300.20/FF/000005 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 83.289 #=GS 4ldtA02/87-231 AC Q9XVR6 #=GS 4ldtA02/87-231 OS Caenorhabditis elegans #=GS 4ldtA02/87-231 DE Ubiquitin thioesterase otubain-like #=GS 4ldtA02/87-231 DR CATH; 4ldt; A:83-227; #=GS 4ldtA02/87-231 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS 4ldtA02/87-231 DR GO; GO:0004843; GO:0005515; GO:0005886; GO:0071108; #=GS 4ldtA02/87-231 DR EC; 3.4.19.12; #=GS 4dhzA02/87-231 AC Q9XVR6 #=GS 4dhzA02/87-231 OS Caenorhabditis elegans #=GS 4dhzA02/87-231 DE Ubiquitin thioesterase otubain-like #=GS 4dhzA02/87-231 DR CATH; 4dhz; A:83-227; #=GS 4dhzA02/87-231 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS 4dhzA02/87-231 DR GO; GO:0004843; GO:0005515; GO:0005886; GO:0071108; #=GS 4dhzA02/87-231 DR EC; 3.4.19.12; #=GS 4dhjL02/83-227 AC Q9XVR6 #=GS 4dhjL02/83-227 OS Caenorhabditis elegans #=GS 4dhjL02/83-227 DE Ubiquitin thioesterase otubain-like #=GS 4dhjL02/83-227 DR CATH; 4dhj; L:83-227; #=GS 4dhjL02/83-227 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS 4dhjL02/83-227 DR GO; GO:0004843; GO:0005515; GO:0005886; GO:0071108; #=GS 4dhjL02/83-227 DR EC; 3.4.19.12; #=GS 4dhjI02/83-227 AC Q9XVR6 #=GS 4dhjI02/83-227 OS Caenorhabditis elegans #=GS 4dhjI02/83-227 DE Ubiquitin thioesterase otubain-like #=GS 4dhjI02/83-227 DR CATH; 4dhj; I:83-227; #=GS 4dhjI02/83-227 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS 4dhjI02/83-227 DR GO; GO:0004843; GO:0005515; GO:0005886; GO:0071108; #=GS 4dhjI02/83-227 DR EC; 3.4.19.12; #=GS 4dhjE02/83-227 AC Q9XVR6 #=GS 4dhjE02/83-227 OS Caenorhabditis elegans #=GS 4dhjE02/83-227 DE Ubiquitin thioesterase otubain-like #=GS 4dhjE02/83-227 DR CATH; 4dhj; E:83-227; #=GS 4dhjE02/83-227 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS 4dhjE02/83-227 DR GO; GO:0004843; GO:0005515; GO:0005886; GO:0071108; #=GS 4dhjE02/83-227 DR EC; 3.4.19.12; #=GS 4dhjA02/83-227 AC Q9XVR6 #=GS 4dhjA02/83-227 OS Caenorhabditis elegans #=GS 4dhjA02/83-227 DE Ubiquitin thioesterase otubain-like #=GS 4dhjA02/83-227 DR CATH; 4dhj; A:83-227; #=GS 4dhjA02/83-227 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS 4dhjA02/83-227 DR GO; GO:0004843; GO:0005515; GO:0005886; GO:0071108; #=GS 4dhjA02/83-227 DR EC; 3.4.19.12; #=GS 4dhiB02/83-227 AC Q9XVR6 #=GS 4dhiB02/83-227 OS Caenorhabditis elegans #=GS 4dhiB02/83-227 DE Ubiquitin thioesterase otubain-like #=GS 4dhiB02/83-227 DR CATH; 4dhi; B:83-227; #=GS 4dhiB02/83-227 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS 4dhiB02/83-227 DR GO; GO:0004843; GO:0005515; GO:0005886; GO:0071108; #=GS 4dhiB02/83-227 DR EC; 3.4.19.12; #=GS Q9XVR6/83-227 AC Q9XVR6 #=GS Q9XVR6/83-227 OS Caenorhabditis elegans #=GS Q9XVR6/83-227 DE Ubiquitin thioesterase otubain-like #=GS Q9XVR6/83-227 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q9XVR6/83-227 DR GO; GO:0004843; GO:0005515; GO:0005886; GO:0071108; #=GS Q9XVR6/83-227 DR EC; 3.4.19.12; #=GS H3H1C1/57-206 AC H3H1C1 #=GS H3H1C1/57-206 OS Phytophthora ramorum #=GS H3H1C1/57-206 DE Uncharacterized protein #=GS H3H1C1/57-206 DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; #=GS M4C1S8/57-210 AC M4C1S8 #=GS M4C1S8/57-210 OS Hyaloperonospora arabidopsidis Emoy2 #=GS M4C1S8/57-210 DE Uncharacterized protein #=GS M4C1S8/57-210 DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis; #=GS A0A0W8CMU1/36-191 AC A0A0W8CMU1 #=GS A0A0W8CMU1/36-191 OS Phytophthora nicotianae #=GS A0A0W8CMU1/36-191 DE Ubiquitin thioesterase otubain #=GS A0A0W8CMU1/36-191 DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; #=GS A0A329T2E2/57-212 AC A0A329T2E2 #=GS A0A329T2E2/57-212 OS Phytophthora cactorum #=GS A0A329T2E2/57-212 DE Uncharacterized protein #=GS A0A329T2E2/57-212 DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora cactorum; #=GS W2XDE9/58-213 AC W2XDE9 #=GS W2XDE9/58-213 OS Phytophthora parasitica CJ01A1 #=GS W2XDE9/58-213 DE Uncharacterized protein #=GS W2XDE9/58-213 DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; #=GS A0A225VUV5/36-189 AC A0A225VUV5 #=GS A0A225VUV5/36-189 OS Phytophthora megakarya #=GS A0A225VUV5/36-189 DE Ubiquitin thioesterase otubain #=GS A0A225VUV5/36-189 DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora megakarya; #=GS H3ERC4/107-252 AC H3ERC4 #=GS H3ERC4/107-252 OS Pristionchus pacificus #=GS H3ERC4/107-252 DE Ubiquitin thioesterase #=GS H3ERC4/107-252 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A8XDJ2/82-226 AC A8XDJ2 #=GS A8XDJ2/82-226 OS Caenorhabditis briggsae #=GS A8XDJ2/82-226 DE Ubiquitin thioesterase otubain-like #=GS A8XDJ2/82-226 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A8XDJ2/82-226 DR EC; 3.4.19.12; #=GS A0A2G5TMP1/82-226 AC A0A2G5TMP1 #=GS A0A2G5TMP1/82-226 OS Caenorhabditis nigoni #=GS A0A2G5TMP1/82-226 DE Ubiquitin thioesterase #=GS A0A2G5TMP1/82-226 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS W2QGG4/58-213 AC W2QGG4 #=GS W2QGG4/58-213 OS Phytophthora parasitica INRA-310 #=GS W2QGG4/58-213 DE Uncharacterized protein #=GS W2QGG4/58-213 DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; #=GS V9FIL9/58-213 AC V9FIL9 #=GS V9FIL9/58-213 OS Phytophthora parasitica P1569 #=GS V9FIL9/58-213 DE Uncharacterized protein #=GS V9FIL9/58-213 DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; #=GF SQ 19 4ldtA02/87-231 RGDGNCFYRAILVGLIEIMLKD------------RARLEKFIASSRDWTRTLVELGFPDWTCTDFCDFFIEFLEKIHSGVHTEEAVY-TILNDDGSANYILMFFRLITSAFLKQNSEEYAPFIDE---GMTVAQYCEQEIEPMWKDADHLAINSLIKAAGT 4dhzA02/87-231 RGDGNCFYRAILVGLIEIMLKD------------RARLEKFIASSRDWTRTLVELGFPDWTCTDFCDFFIEFLEKIHSGVHTEEAVY-TILNDDGSANYILMFFRLITSAFLKQNSEEYAPFIDE---GMTVAQYCEQEIEPMWKDADHLAINSLIKAAGT 4dhjL02/83-227 RGDGNCFYRAILVGLIEIMLKD------------RARLEKFIASSRDWTRTLVELGFPDWTCTDFCDFFIEFLEKIHSGVHTEEAVY-TILNDDGSANYILMFFRLITSAFLKQNSEEYAPFIDE---GMTVAQYCEQEIEPMWKDADHLAINSLIKAAGT 4dhjI02/83-227 RGDGNCFYRAILVGLIEIMLKD------------RARLEKFIASSRDWTRTLVELGFPDWTCTDFCDFFIEFLEKIHSGVHTEEAVY-TILNDDGSANYILMFFRLITSAFLKQNSEEYAPFIDE---GMTVAQYCEQEIEPMWKDADHLAINSLIKAAGT 4dhjE02/83-227 RGDGNCFYRAILVGLIEIMLKD------------RARLEKFIASSRDWTRTLVELGFPDWTCTDFCDFFIEFLEKIHSGVHTEEAVY-TILNDDGSANYILMFFRLITSAFLKQNSEEYAPFIDE---GMTVAQYCEQEIEPMWKDADHLAINSLIKAAGT 4dhjA02/83-227 RGDGNCFYRAILVGLIEIMLKD------------RARLEKFIASSRDWTRTLVELGFPDWTCTDFCDFFIEFLEKIHSGVHTEEAVY-TILNDDGSANYILMFFRLITSAFLKQNSEEYAPFIDE---GMTVAQYCEQEIEPMWKDADHLAINSLIKAAGT 4dhiB02/83-227 RGDGNCFYRAILVGLIEIMLKD------------RARLEKFIASSRDWTRTLVELGFPDWTCTDFCDFFIEFLEKIHSGVHTEEAVY-TILNDDGSANYILMFFRLITSAFLKQNSEEYAPFIDE---GMTVAQYCEQEIEPMWKDADHLAINSLIKAAGT Q9XVR6/83-227 RGDGNCFYRAILVGLIEIMLKD------------RARLEKFIASSRDWTRTLVELGFPDWTCTDFCDFFIEFLEKIHSGVHTEEAVY-TILNDDGSANYILMFFRLITSAFLKQNSEEYAPFIDE---GMTVAQYCEQEIEPMWKDADHLAINSLIKAAGT H3H1C1/57-206 RGDGNCFFRGFIFALCERLLPSAG------NEALRDRIQRTIQQSK---SELVAIGYSDVAIDAFWETFVDYLAAMESRSHA-ELVQ-DFQTEGGEAEYLVWYMRLLTAGYMKKNAETYQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQV M4C1S8/57-210 RGDGNCFFRSFIFTLCEHLLPSQGA--EDSNAALRCRIQDKIQKSK---SELVAIGYSDVAIDAFWETFVDYLAAMETRSYA-ELVQ-DFQTEGGEAEYLVWYMRLLTAGYMKKNAERFQPFIDGPYPGQTVAQFCATEVEPMGKECDQPQIAALTEALEV A0A0W8CMU1/36-191 RGDGNCFFRGFIFALCEQLLPTGGAGGEDSNAALRSRIQDKIQMSK---SELVAIGYSDVAIDAFWETFVDYLAAMETRSHA-ELVQ-DFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQV A0A329T2E2/57-212 RGDGNCFFRGFIFALCERLLPSGGAGGDDSNAALCSCIQQKIQTSK---SELVAIGYSDVAIDAFWETFVDYLAAMETRSHA-ELVQ-DFQTEGGESEYLVWYMRLLTAGYMKKNVETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQV W2XDE9/58-213 RGDGNCFFRGFIFALCEQLLPTGGAGGEDSNAALRSRIQDKIQMSK---SELVAIGYSDVAIDAFWETFVDYLAAMETRSHA-ELVQ-DFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQV A0A225VUV5/36-189 RGDGNCFFRGFIFALCERLLPSGGV--EDSNAALRRRIQHKIQTSK---SELVAIGYSDVAIDAFWETFVDYLAAMETRSHA-ELVQ-DFQTEGGESEYLVWYMRLLTAGYMKQHADTFQPFIDGLFPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQV H3ERC4/107-252 RKDGNCFYRAFLVAQTEIILSD------------PDEKSRFVSVCKGWKNRLVRLGFSEFTTIDFCDTFFEFLDSIVDGGKTWKSIYEETFLDDNNANYLIIFLRLVASGYVKEHEADYAPFIDG---ERTLAEYCVSEIEQMWVDADHLAITAFVQAMGS A8XDJ2/82-226 RGDGNCFIRAIQVGLVEILLND------------KERLVKFIASCKEWTERLVKLGFPDWTCTDFCEFFIEFIEKVRDGIHQKEDVF-RIFNDDNTANYLLMFFRLITSGYLKEHAAEYEPFLDE---GMSLAQYCETEIEAMWKESDHLGIIALVRALNI A0A2G5TMP1/82-226 RGDGNCFIRAIQVGLVEILLND------------KERLVKFIASSKEWTERLVKLGFPDWTCTDFCEFFIEFIEKVRDGVHQREDVF-RIFNDDNTANYLLMFFRLITSGYLKEHAAEYEPFLDE---GMSLAQYCETEIEAMWKESDHLGIIALVRALNI W2QGG4/58-213 RGDGNCFFRGFIFALCEQLLPTGGAGGEDSNAALRSRIQDKIQMSK---SELVAIGYSDVAIDAFWETFVDYLAAMETRSHA-ELVQ-DFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQV V9FIL9/58-213 RGDGNCFFRGFIFALCEQLLPTGGAGGEDSNAALRSRIQDKIQMSK---NELMAIGYSDVAIDAFWETFVDYLAAMETRSHA-ELVQ-DFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQV #=GC scorecons 98999996955555749469451110011111116475454854771224498469768464559675967775564554751848504545767466966475996866769565657599796111847798795497979577596549468559545 #=GC scorecons_70 *********_____*_*_**______________*_*____*__**_____**_***_*_*___*_*_*****__*____*__*_*______*_*_*_**__*_**_*_****_*_*_*_****____*_******__*****_**_**__*_**__*___ #=GC scorecons_80 *******_*_____*_*__*________________*____*__**_____**__**_*_____*___*__**_______*__*_*____________*___*_**_*__*_*_____*_****____*_******__*_*_*_*__*___*__*__*___ #=GC scorecons_90 *_*****_*_______*__*_____________________*_________**__*__*_____*___*______________*_*____________*_____**_*____*_______**_*____*___**_*__*_*_*____*___*__*__*___ //