# STOCKHOLM 1.0
#=GF ID 1.20.1250.40/FF/000014
#=GF DE RNA polymerase II Rpb4 core protein
#=GF AC 1.20.1250.40/FF/000014
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 44.816
#=GS Q2QQM6/1-97       AC Q2QQM6
#=GS Q2QQM6/1-97       OS Oryza sativa Japonica Group
#=GS Q2QQM6/1-97       DE Expressed protein
#=GS Q2QQM6/1-97       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A1D6E555/1-95   AC A0A1D6E555
#=GS A0A1D6E555/1-95   OS Zea mays
#=GS A0A1D6E555/1-95   DE RNA polymerase II Rpb4 core protein
#=GS A0A1D6E555/1-95   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS I1IIC5/1-129      AC I1IIC5
#=GS I1IIC5/1-129      OS Brachypodium distachyon
#=GS I1IIC5/1-129      DE Uncharacterized protein
#=GS I1IIC5/1-129      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A2T7EH31/1-129  AC A0A2T7EH31
#=GS A0A2T7EH31/1-129  OS Panicum hallii var. hallii
#=GS A0A2T7EH31/1-129  DE Uncharacterized protein
#=GS A0A2T7EH31/1-129  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; Panicum hallii var. hallii; 
#=GS A0A3L6RAK3/1-127  AC A0A3L6RAK3
#=GS A0A3L6RAK3/1-127  OS Panicum miliaceum
#=GS A0A3L6RAK3/1-127  DE Uncharacterized protein
#=GS A0A3L6RAK3/1-127  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; 
#=GS A0A2S3HE13/1-129  AC A0A2S3HE13
#=GS A0A2S3HE13/1-129  OS Panicum hallii
#=GS A0A2S3HE13/1-129  DE Uncharacterized protein
#=GS A0A2S3HE13/1-129  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; 
#=GS B6SM99/1-129      AC B6SM99
#=GS B6SM99/1-129      OS Zea mays
#=GS B6SM99/1-129      DE Calcitonin peptide-receptor component protein
#=GS B6SM99/1-129      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6E557/1-129  AC A0A1D6E557
#=GS A0A1D6E557/1-129  OS Zea mays
#=GS A0A1D6E557/1-129  DE RNA polymerase II Rpb4 core protein
#=GS A0A1D6E557/1-129  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GF SQ 8
Q2QQM6/1-97               MKIEKTNAGFLTNFEVLDFLRSRGAKTDPMGCLGAVAASECKVYEYLLKTPACNQTRESINEFVTRCESFKLTNADKLNVINWRPSSAADAYAQNEG--------------------------------
A0A1D6E555/1-95           MKIQKANAGVLTNFEVLDFLRSRGAKIDPMGCLGAVAVSECKVYEYILKTPACNQTRESIYEFVKRSEGFRLAEADKLNVINWRPSSTADAYAVL----------------------------------
I1IIC5/1-129              MKIEKASAGHLTNLEVLQFLRSRGATVDPMGCLGAVAASECKVYEYLLKTPACNQTRESVTEFVKRCEGFKLTDADKQNVINWRPSSAADVYAMVEECGKRFSKDEQGGTTNEDKRVEELLNLINEIFP
A0A2T7EH31/1-129          MKILKANAGSLTNFEVLDFLRSRGAKVDPMGCLGVVAASECKVYEYLLQTPACNQTRESIYEFVKRSEGFRLADADKLNVINWRPSSAADAYAMIEECGRRFNRDERGETCDEDERVQEFLDMVKEVLP
A0A3L6RAK3/1-127          MKILKANAGSLTNFEVLDFLRSRGAKVDPMGCLGVVAASECKVYEYLLQTPACNQTRESIYEFVKRCEGFRLADADKLNVINWRPSSAADAYAMIEECGRRFNRDEQGETCDEDERVQEFLDMVKER--
A0A2S3HE13/1-129          MKILKANAGSLTNFEVLDFLRSRGAKVDPMGCLGVVAASECKVYEYLLQTPACNQTRESIYEFVKRSEGFRLADADKLNVINWRPSSAADAYAMIEECGRRFNRDERGETCDEDERVQEFLDMVKEVLP
B6SM99/1-129              MKIQKANAGVLTNFEVLDFLRSRGAKIDPMGCLGAVAVSECKVYEYILKTPACNQTRESIYEFVKRSEGFRLAEADKLNVINWRPSSAADAYAMIEECGKRFSRDERGEACDEDERVQEFLDMVKEVLP
A0A1D6E557/1-129          MKIQKANAGVLTNFEVLDFLRSRGAKIDPMGCLGAVAVSECKVYEYILKTPACNQTRESIYEFVKRSEGFRLAEADKLNVINWRPSSAADAYAMIEECGKRFSRDERGEACDEDERVQEFLDMVKEVLP
#=GC scorecons            999397799399979997999999975999999969969999999969699999999997499969596979659996999999999799799445433233123323222233233232322223112
#=GC scorecons_70         ***_*****_****************_**********_**********************_*****_******_*******************____________________________________
#=GC scorecons_80         ***_*_***_***************__*******_**_********_*_***********_***_*_*_*_*__***_***************____________________________________
#=GC scorecons_90         ***_*__**_***_***_*******__*******_**_********_*_**********__***_*_*_*_*__***_*********_**_**____________________________________
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