# STOCKHOLM 1.0
#=GF ID 1.20.1250.20/FF/000725
#=GF DE Uncharacterized protein
#=GF AC 1.20.1250.20/FF/000725
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 86.861
#=GS F6ZDN7/253-455  AC F6ZDN7
#=GS F6ZDN7/253-455  OS Ciona intestinalis
#=GS F6ZDN7/253-455  DE Uncharacterized protein
#=GS F6ZDN7/253-455  DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS C3Y3D0/287-489  AC C3Y3D0
#=GS C3Y3D0/287-489  OS Branchiostoma floridae
#=GS C3Y3D0/287-489  DE Uncharacterized protein
#=GS C3Y3D0/287-489  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3Y3C9/263-445  AC C3Y3C9
#=GS C3Y3C9/263-445  OS Branchiostoma floridae
#=GS C3Y3C9/263-445  DE Uncharacterized protein
#=GS C3Y3C9/263-445  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3YFX8/182-380  AC C3YFX8
#=GS C3YFX8/182-380  OS Branchiostoma floridae
#=GS C3YFX8/182-380  DE Uncharacterized protein
#=GS C3YFX8/182-380  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3Z6M3/236-397  AC C3Z6M3
#=GS C3Z6M3/236-397  OS Branchiostoma floridae
#=GS C3Z6M3/236-397  DE Uncharacterized protein
#=GS C3Z6M3/236-397  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZBL9/249-449  AC C3ZBL9
#=GS C3ZBL9/249-449  OS Branchiostoma floridae
#=GS C3ZBL9/249-449  DE Uncharacterized protein
#=GS C3ZBL9/249-449  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3YUT7/242-452  AC C3YUT7
#=GS C3YUT7/242-452  OS Branchiostoma floridae
#=GS C3YUT7/242-452  DE Uncharacterized protein
#=GS C3YUT7/242-452  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3YUU4/185-385  AC C3YUU4
#=GS C3YUU4/185-385  OS Branchiostoma floridae
#=GS C3YUU4/185-385  DE Uncharacterized protein
#=GS C3YUU4/185-385  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3Y3D2/603-805  AC C3Y3D2
#=GS C3Y3D2/603-805  OS Branchiostoma floridae
#=GS C3Y3D2/603-805  DE Uncharacterized protein
#=GS C3Y3D2/603-805  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GF SQ 9
F6ZDN7/253-455          --IFTSPIFWGLFIGHFCSNYGHYNLLTNLPSYIDQVFGLSIKD------------------NSALAAIPFISLWFFTTLAGWIADSIRETKRLSTLNVRRILIVI-AQFVPAIFLVSAGYLGCNPAAAILVVTLAAGFGGFATPGFKVCHVEIAPRYSGILYSLTNTFATISGQVVGPIAGYVTGNVADVREAWRIVYYVGAAVSALGGFVVLATLKTDVQSW
C3Y3D0/287-489          -KILTSPPVWALVIGQFSSNWGVFFLSTQLPNYMQNVLGFNIQT------------------NGLLSALPFALSMVTMMASSAAADRLIQGGKIPKVWIRRGFVITGFTGMAICGLILANLTGCNPAAAVSLLCLTQGFNGLMVAGFRAVHVEFAPRFSGVTFALANMGGTLSGIFAPLLVGLITDNYPTP-AAWSTIFYIGAAIQGVGGIFTAVFMRTEVQP-
C3Y3C9/263-445          -KILTSPPVWALVIGQFSSNWGVFFLATQLPNYMKNVLGFNIRT------------------NGLLSALPFALNMVSTMASGAAADRLIQGGKIPKVWIRRGFVIIGFAGMVICGVILANLSGCDPVAAVSLLCLTQGFNGLTVAGVRAVHVEFAPRFSGVTYGLANMAGTLSGIFAPLLVGFLTDNY------------------GVGGIVTAVFMRTD----
C3YFX8/182-380          LKMLSTPHLWVLVYIHCTDSWGLDIMMTSLPLYIDTIMNFNIDT------------------NGGVSALPYLTIMASRVLSSLIIDPVINQSRFQKVNIRKVCILV-LVGAAAC-LVAVGHVGCDSTTAIVLLCLGMAFRGVMVPGFYPSYTDLTLGYSGVAFGVSNSVANCTGFLVPLVVGVLTDKNVT----WQKVFYISEAIFVSGSVMALGFLRTDPVS-
C3Z6M3/236-397          FKMLSSPHLWALIYIHCTDGWGFFMMLTCLPLYMDTILNFNIDA------------------NGALSAMPYLTLMASRILSSFIIDAIIKLSSFKKVNIRKTSILA-LVGVAAC-LVAVGHVRCDSTAAIAMLCLATAMSGVMIPGFYPSYTELTLGFSGVAFGISNAVTNCAGFIVPLMVG------------------------------------------
C3ZBL9/249-449          -KMLSSLHLWVLIYIHCTDSWGFYMILICLPLYMDTILNFDINA------------------NGGLSAVPYLALMATRILSSLTIDALIKQSRFRKVNIRKACVLG-LVGVAAC-LVVVGHVRCDATAAIALLCLAMAMRGLMVPGFYPSYTDLTLGFSGVAFGVSNCVSNCTGFIVPLVVGVLTDGNQTI-AAWLKVFYIGAAISVSGSVMALLFLRTDPVS-
C3YUT7/242-452          FKMLTSPHLWVLIYIHCTDGWGFYMMLTCLPLYMDTILNFNLDAVSKLYEIGIYQWQCMPKMNGALSAMPYLTLMASRILSSVIIDAIIKLSRFKKVNIRKTSLLA---GVGAC-LVAVGHVRCDSTAAIAMLCLATVMQGVMVPGFYPSYTELTLGFSGVAFGLSNAVANCAGFIVPLTVGIITDENQTL-AAWQKVFYIGAAISVSGSVMALLF--------
C3YUU4/185-385          --LFLSPHLWVLIYIHCTDNWGFFMMLTSLPLYMDTILNFSIDT------------------NGALSAMPYLTLMASRILSSLIIDAVIMRSGFKKVNIRKTCTFA-LVGVAAC-LVAVGHVRCDSTAAIAMLCLATVMQGVMVPGFYPSYTELTLGFSGVAFGLSNAVANCAGFIVPLTVGVITEANQTV-EAWQKVFYIGAAISVSGSVMALLFLRTDPVSW
C3Y3D2/603-805          -KVFSSLPVWALIVGQLSSNWGNYFLLTQLPNYMKNVLRFDIQT------------------NGLLSALPFIFAMVSMLASSAAADRLIQGGKIPKVWIRRGFVITGFSGMVTCGVILANLSGCNPVAAVSLLCLIQAFNSLTTAGMRAVHVEFAPRFSGVTFALANTAGTLSGIFAPLLVGFITENDPTL-GAWMKIFYIGAALQGVGGIFTVVFMRTDVQP-
#=GC scorecons          05565764595954464555793546573994975566575745000000000000000000974879597534645455763559456435553774896335540326545707745544596558974677953453755569645465756557998575659344545944677479346432231013412444443432336443443534541120
#=GC scorecons_70       ___*_**__*_*___*____**_____*_**_**__**_*_*____________________**_***_**___*_____**___*__*______**_***________*___*_**______**__***__***_____*____**___*_*_*__****_*_*_*______*___**_**__*_______________________*_______________
#=GC scorecons_80       _____*___*_*________**_____*_**_**_____*_*____________________**_***_**_________*____*_________**_**_______________________*___**___***_____*____*______*____****_*___*______*___**_**__________________________________________
#=GC scorecons_90       _________*_*_________*_______**_*_____________________________*____*_*_______________*_____________*_______________________*____*_____*__________*____________**______*______*_______*__________________________________________
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