# STOCKHOLM 1.0
#=GF ID 1.20.120.1480/FF/000001
#=GF DE DNA-binding protein RAP1
#=GF AC 1.20.120.1480/FF/000001
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 7.629
#=GS 4bjtC01/51-152      AC P11938
#=GS 4bjtC01/51-152      OS Saccharomyces cerevisiae S288C
#=GS 4bjtC01/51-152      DE DNA-binding protein RAP1
#=GS 4bjtC01/51-152      DR CATH; 4bjt; C:676-777; 
#=GS 4bjtC01/51-152      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 4bjtC01/51-152      DR GO; GO:0000122; GO:0000228; GO:0000723; GO:0000784; GO:0000981; GO:0000987; GO:0001085; GO:0001094; GO:0003691; GO:0003700; GO:0005515; GO:0005634; GO:0005829; GO:0006348; GO:0008301; GO:0010833; GO:0017025; GO:0030466; GO:0031492; GO:0031848; GO:0031936; GO:0032993; GO:0035390; GO:0042162; GO:0043565; GO:0045944; GO:0051880; GO:0070187; GO:0070200; GO:0071169; GO:0071919; GO:0072363; 
#=GS 4bjtB01/51-152      AC P11938
#=GS 4bjtB01/51-152      OS Saccharomyces cerevisiae S288C
#=GS 4bjtB01/51-152      DE DNA-binding protein RAP1
#=GS 4bjtB01/51-152      DR CATH; 4bjt; B:676-777; 
#=GS 4bjtB01/51-152      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 4bjtB01/51-152      DR GO; GO:0000122; GO:0000228; GO:0000723; GO:0000784; GO:0000981; GO:0000987; GO:0001085; GO:0001094; GO:0003691; GO:0003700; GO:0005515; GO:0005634; GO:0005829; GO:0006348; GO:0008301; GO:0010833; GO:0017025; GO:0030466; GO:0031492; GO:0031848; GO:0031936; GO:0032993; GO:0035390; GO:0042162; GO:0043565; GO:0045944; GO:0051880; GO:0070187; GO:0070200; GO:0071169; GO:0071919; GO:0072363; 
#=GS 4bjtA01/51-152      AC P11938
#=GS 4bjtA01/51-152      OS Saccharomyces cerevisiae S288C
#=GS 4bjtA01/51-152      DE DNA-binding protein RAP1
#=GS 4bjtA01/51-152      DR CATH; 4bjt; A:676-777; 
#=GS 4bjtA01/51-152      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 4bjtA01/51-152      DR GO; GO:0000122; GO:0000228; GO:0000723; GO:0000784; GO:0000981; GO:0000987; GO:0001085; GO:0001094; GO:0003691; GO:0003700; GO:0005515; GO:0005634; GO:0005829; GO:0006348; GO:0008301; GO:0010833; GO:0017025; GO:0030466; GO:0031492; GO:0031848; GO:0031936; GO:0032993; GO:0035390; GO:0042162; GO:0043565; GO:0045944; GO:0051880; GO:0070187; GO:0070200; GO:0071169; GO:0071919; GO:0072363; 
#=GS 4bj6E01/50-152      AC P11938
#=GS 4bj6E01/50-152      OS Saccharomyces cerevisiae S288C
#=GS 4bj6E01/50-152      DE DNA-binding protein RAP1
#=GS 4bj6E01/50-152      DR CATH; 4bj6; E:675-777; 
#=GS 4bj6E01/50-152      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 4bj6E01/50-152      DR GO; GO:0000122; GO:0000228; GO:0000723; GO:0000784; GO:0000981; GO:0000987; GO:0001085; GO:0001094; GO:0003691; GO:0003700; GO:0005515; GO:0005634; GO:0005829; GO:0006348; GO:0008301; GO:0010833; GO:0017025; GO:0030466; GO:0031492; GO:0031848; GO:0031936; GO:0032993; GO:0035390; GO:0042162; GO:0043565; GO:0045944; GO:0051880; GO:0070187; GO:0070200; GO:0071169; GO:0071919; GO:0072363; 
#=GS 4bj6C01/50-152      AC P11938
#=GS 4bj6C01/50-152      OS Saccharomyces cerevisiae S288C
#=GS 4bj6C01/50-152      DE DNA-binding protein RAP1
#=GS 4bj6C01/50-152      DR CATH; 4bj6; C:675-777; 
#=GS 4bj6C01/50-152      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 4bj6C01/50-152      DR GO; GO:0000122; GO:0000228; GO:0000723; GO:0000784; GO:0000981; GO:0000987; GO:0001085; GO:0001094; GO:0003691; GO:0003700; GO:0005515; GO:0005634; GO:0005829; GO:0006348; GO:0008301; GO:0010833; GO:0017025; GO:0030466; GO:0031492; GO:0031848; GO:0031936; GO:0032993; GO:0035390; GO:0042162; GO:0043565; GO:0045944; GO:0051880; GO:0070187; GO:0070200; GO:0071169; GO:0071919; GO:0072363; 
#=GS 4bj5E01/50-152      AC P11938
#=GS 4bj5E01/50-152      OS Saccharomyces cerevisiae S288C
#=GS 4bj5E01/50-152      DE DNA-binding protein RAP1
#=GS 4bj5E01/50-152      DR CATH; 4bj5; E:675-777; 
#=GS 4bj5E01/50-152      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 4bj5E01/50-152      DR GO; GO:0000122; GO:0000228; GO:0000723; GO:0000784; GO:0000981; GO:0000987; GO:0001085; GO:0001094; GO:0003691; GO:0003700; GO:0005515; GO:0005634; GO:0005829; GO:0006348; GO:0008301; GO:0010833; GO:0017025; GO:0030466; GO:0031492; GO:0031848; GO:0031936; GO:0032993; GO:0035390; GO:0042162; GO:0043565; GO:0045944; GO:0051880; GO:0070187; GO:0070200; GO:0071169; GO:0071919; GO:0072363; 
#=GS 4bj5C01/50-152      AC P11938
#=GS 4bj5C01/50-152      OS Saccharomyces cerevisiae S288C
#=GS 4bj5C01/50-152      DE DNA-binding protein RAP1
#=GS 4bj5C01/50-152      DR CATH; 4bj5; C:675-777; 
#=GS 4bj5C01/50-152      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 4bj5C01/50-152      DR GO; GO:0000122; GO:0000228; GO:0000723; GO:0000784; GO:0000981; GO:0000987; GO:0001085; GO:0001094; GO:0003691; GO:0003700; GO:0005515; GO:0005634; GO:0005829; GO:0006348; GO:0008301; GO:0010833; GO:0017025; GO:0030466; GO:0031492; GO:0031848; GO:0031936; GO:0032993; GO:0035390; GO:0042162; GO:0043565; GO:0045944; GO:0051880; GO:0070187; GO:0070200; GO:0071169; GO:0071919; GO:0072363; 
#=GS 3owtB01/1-107       AC P11938
#=GS 3owtB01/1-107       OS Saccharomyces cerevisiae S288C
#=GS 3owtB01/1-107       DE DNA-binding protein RAP1
#=GS 3owtB01/1-107       DR CATH; 3owt; B:676-777; 
#=GS 3owtB01/1-107       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 3owtB01/1-107       DR GO; GO:0000122; GO:0000228; GO:0000723; GO:0000784; GO:0000981; GO:0000987; GO:0001085; GO:0001094; GO:0003691; GO:0003700; GO:0005515; GO:0005634; GO:0005829; GO:0006348; GO:0008301; GO:0010833; GO:0017025; GO:0030466; GO:0031492; GO:0031848; GO:0031936; GO:0032993; GO:0035390; GO:0042162; GO:0043565; GO:0045944; GO:0051880; GO:0070187; GO:0070200; GO:0071169; GO:0071919; GO:0072363; 
#=GS 3owtA01/1-107       AC P11938
#=GS 3owtA01/1-107       OS Saccharomyces cerevisiae S288C
#=GS 3owtA01/1-107       DE DNA-binding protein RAP1
#=GS 3owtA01/1-107       DR CATH; 3owt; A:677-777; 
#=GS 3owtA01/1-107       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 3owtA01/1-107       DR GO; GO:0000122; GO:0000228; GO:0000723; GO:0000784; GO:0000981; GO:0000987; GO:0001085; GO:0001094; GO:0003691; GO:0003700; GO:0005515; GO:0005634; GO:0005829; GO:0006348; GO:0008301; GO:0010833; GO:0017025; GO:0030466; GO:0031492; GO:0031848; GO:0031936; GO:0032993; GO:0035390; GO:0042162; GO:0043565; GO:0045944; GO:0051880; GO:0070187; GO:0070200; GO:0071169; GO:0071919; GO:0072363; 
#=GS P11938/676-777      AC P11938
#=GS P11938/676-777      OS Saccharomyces cerevisiae S288C
#=GS P11938/676-777      DE DNA-binding protein RAP1
#=GS P11938/676-777      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P11938/676-777      DR GO; GO:0000122; GO:0000228; GO:0000723; GO:0000784; GO:0000981; GO:0000987; GO:0001085; GO:0001094; GO:0003691; GO:0003700; GO:0005515; GO:0005634; GO:0005829; GO:0006348; GO:0008301; GO:0010833; GO:0017025; GO:0030466; GO:0031492; GO:0031848; GO:0031936; GO:0032993; GO:0035390; GO:0042162; GO:0043565; GO:0045944; GO:0051880; GO:0070187; GO:0070200; GO:0071169; GO:0071919; GO:0072363; 
#=GS J8Q3D2/669-770      AC J8Q3D2
#=GS J8Q3D2/669-770      OS Saccharomyces arboricola H-6
#=GS J8Q3D2/669-770      DE Rap1p
#=GS J8Q3D2/669-770      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; 
#=GS H0GMB9/676-777      AC H0GMB9
#=GS H0GMB9/676-777      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GMB9/676-777      DE Rap1p
#=GS H0GMB9/676-777      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8VIC0/676-777  AC A0A0L8VIC0
#=GS A0A0L8VIC0/676-777  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VIC0/676-777  DE RAP1p DNA-binding transcription regulator that binds many loci
#=GS A0A0L8VIC0/676-777  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS A0A0L8RCL2/678-779  AC A0A0L8RCL2
#=GS A0A0L8RCL2/678-779  OS Saccharomyces eubayanus
#=GS A0A0L8RCL2/678-779  DE RAP1-like protein
#=GS A0A0L8RCL2/678-779  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS C8ZG17/676-777      AC C8ZG17
#=GS C8ZG17/676-777      OS Saccharomyces cerevisiae EC1118
#=GS C8ZG17/676-777      DE Rap1p
#=GS C8ZG17/676-777      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1NXQ0/655-756      AC N1NXQ0
#=GS N1NXQ0/655-756      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1NXQ0/655-756      DE Rap1p
#=GS N1NXQ0/655-756      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZRM4/676-777      AC A6ZRM4
#=GS A6ZRM4/676-777      OS Saccharomyces cerevisiae YJM789
#=GS A6ZRM4/676-777      DE Repressor activator protein
#=GS A6ZRM4/676-777      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LP60/676-777      AC B3LP60
#=GS B3LP60/676-777      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LP60/676-777      DE Repressor activator protein
#=GS B3LP60/676-777      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WLP7/676-777      AC G2WLP7
#=GS G2WLP7/676-777      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WLP7/676-777      DE K7_Rap1p
#=GS G2WLP7/676-777      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GZY2/675-776      AC H0GZY2
#=GS H0GZY2/675-776      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GZY2/675-776      DE Rap1p
#=GS H0GZY2/675-776      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS C7GPE1/676-777      AC C7GPE1
#=GS C7GPE1/676-777      OS Saccharomyces cerevisiae JAY291
#=GS C7GPE1/676-777      DE Rap1p
#=GS C7GPE1/676-777      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF SQ 21
4bjtC01/51-152              -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
4bjtB01/51-152              -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
4bjtA01/51-152              -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
4bj6E01/50-152              ----SDFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
4bj6C01/50-152              ----SDFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
4bj5E01/50-152              ----SDFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
4bj5C01/50-152              ----SDFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
3owtB01/1-107               SAIRSDFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
3owtA01/1-107               SAIRSDFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
P11938/676-777              -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
J8Q3D2/669-770              -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
H0GMB9/676-777              -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
A0A0L8VIC0/676-777          -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
A0A0L8RCL2/678-779          -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGNTRQFMDKLHDVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
C8ZG17/676-777              -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
N1NXQ0/655-756              -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
A6ZRM4/676-777              -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
B3LP60/676-777              -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
G2WLP7/676-777              -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
H0GZY2/675-776              -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHDVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDSV
C7GPE1/676-777              -----DFSNEDIYDNIDPDTISFPPKIATTDLFLPLFFHFGSTRQFMDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSGDLMVFPRYFLNMFKDNV
#=GC scorecons              00001999999999999999999999999999999999999899999999989999999999999999999999999999999999999999999999999999989
#=GC scorecons_70           _____******************************************************************************************************
#=GC scorecons_80           _____******************************************************************************************************
#=GC scorecons_90           _____******************************************************************************************************
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