# STOCKHOLM 1.0
#=GF ID 1.10.940.10/FF/000011
#=GF DE Transcription antitermination protein NusB
#=GF AC 1.10.940.10/FF/000011
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 2.799
#=GS Q2FY45/1-129      AC Q2FY45
#=GS Q2FY45/1-129      OS Staphylococcus aureus subsp. aureus NCTC 8325
#=GS Q2FY45/1-129      DE Transcription antitermination protein NusB
#=GS Q2FY45/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS P65578/1-129      AC P65578
#=GS P65578/1-129      OS Staphylococcus aureus subsp. aureus N315
#=GS P65578/1-129      DE Transcription antitermination protein NusB
#=GS P65578/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A1E8X1V1/1-129  AC A0A1E8X1V1
#=GS A0A1E8X1V1/1-129  OS Staphylococcus sp. HMSC055H04
#=GS A0A1E8X1V1/1-129  DE Transcription antitermination protein NusB
#=GS A0A1E8X1V1/1-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus sp. HMSC055H04; 
#=GS A0A380J7W5/1-129  AC A0A380J7W5
#=GS A0A380J7W5/1-129  OS Staphylococcus schleiferi
#=GS A0A380J7W5/1-129  DE Transcription antitermination protein NusB
#=GS A0A380J7W5/1-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus schleiferi; 
#=GS A0A1S5ZLG8/1-129  AC A0A1S5ZLG8
#=GS A0A1S5ZLG8/1-129  OS Staphylococcus aureus
#=GS A0A1S5ZLG8/1-129  DE Transcription antitermination protein NusB
#=GS A0A1S5ZLG8/1-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS A8Z464/1-129      AC A8Z464
#=GS A8Z464/1-129      OS Staphylococcus aureus subsp. aureus USA300_TCH1516
#=GS A8Z464/1-129      DE Transcription antitermination protein NusB
#=GS A8Z464/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS Q2FGK9/1-129      AC Q2FGK9
#=GS Q2FGK9/1-129      OS Staphylococcus aureus subsp. aureus USA300
#=GS Q2FGK9/1-129      DE Transcription antitermination protein NusB
#=GS Q2FGK9/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A6QH69/1-129      AC A6QH69
#=GS A6QH69/1-129      OS Staphylococcus aureus subsp. aureus str. Newman
#=GS A6QH69/1-129      DE Transcription antitermination protein NusB
#=GS A6QH69/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS P65577/1-129      AC P65577
#=GS P65577/1-129      OS Staphylococcus aureus subsp. aureus Mu50
#=GS P65577/1-129      DE Transcription antitermination protein NusB
#=GS P65577/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS Q6G941/1-129      AC Q6G941
#=GS Q6G941/1-129      OS Staphylococcus aureus subsp. aureus MSSA476
#=GS Q6G941/1-129      DE Transcription antitermination protein NusB
#=GS Q6G941/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS P65579/1-129      AC P65579
#=GS P65579/1-129      OS Staphylococcus aureus subsp. aureus MW2
#=GS P65579/1-129      DE Transcription antitermination protein NusB
#=GS P65579/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A7X2Q3/1-129      AC A7X2Q3
#=GS A7X2Q3/1-129      OS Staphylococcus aureus subsp. aureus Mu3
#=GS A7X2Q3/1-129      DE Transcription antitermination protein NusB
#=GS A7X2Q3/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A6U1Z6/1-129      AC A6U1Z6
#=GS A6U1Z6/1-129      OS Staphylococcus aureus subsp. aureus JH1
#=GS A6U1Z6/1-129      DE Transcription antitermination protein NusB
#=GS A6U1Z6/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A5IT53/1-129      AC A5IT53
#=GS A5IT53/1-129      OS Staphylococcus aureus subsp. aureus JH9
#=GS A5IT53/1-129      DE Transcription antitermination protein NusB
#=GS A5IT53/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS Q5HFP7/1-129      AC Q5HFP7
#=GS Q5HFP7/1-129      OS Staphylococcus aureus subsp. aureus COL
#=GS Q5HFP7/1-129      DE Transcription antitermination protein NusB
#=GS Q5HFP7/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0E1AKK3/1-129  AC A0A0E1AKK3
#=GS A0A0E1AKK3/1-129  OS Staphylococcus aureus subsp. aureus Z172
#=GS A0A0E1AKK3/1-129  DE Transcription antitermination protein NusB
#=GS A0A0E1AKK3/1-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS W8UAI9/1-129      AC W8UAI9
#=GS W8UAI9/1-129      OS Staphylococcus aureus
#=GS W8UAI9/1-129      DE Transcription antitermination protein NusB
#=GS W8UAI9/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS A0A0E1VGW9/1-129  AC A0A0E1VGW9
#=GS A0A0E1VGW9/1-129  OS Staphylococcus aureus subsp. aureus USA300_TCH959
#=GS A0A0E1VGW9/1-129  DE Transcription antitermination protein NusB
#=GS A0A0E1VGW9/1-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0D1JN11/1-129  AC A0A0D1JN11
#=GS A0A0D1JN11/1-129  OS Staphylococcus aureus subsp. aureus
#=GS A0A0D1JN11/1-129  DE Transcription antitermination protein NusB
#=GS A0A0D1JN11/1-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS Q6GGH4/1-129      AC Q6GGH4
#=GS Q6GGH4/1-129      OS Staphylococcus aureus subsp. aureus MRSA252
#=GS Q6GGH4/1-129      DE Transcription antitermination protein NusB
#=GS Q6GGH4/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0E1X6W3/1-129  AC A0A0E1X6W3
#=GS A0A0E1X6W3/1-129  OS Staphylococcus aureus subsp. aureus MN8
#=GS A0A0E1X6W3/1-129  DE Transcription antitermination protein NusB
#=GS A0A0E1X6W3/1-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; 
#=GS A0A0Z4AZ24/1-129  AC A0A0Z4AZ24
#=GS A0A0Z4AZ24/1-129  OS Staphylococcus aureus
#=GS A0A0Z4AZ24/1-129  DE Transcription antitermination protein NusB
#=GS A0A0Z4AZ24/1-129  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GS Q2YYB7/1-129      AC Q2YYB7
#=GS Q2YYB7/1-129      OS Staphylococcus aureus RF122
#=GS Q2YYB7/1-129      DE Transcription antitermination protein NusB
#=GS Q2YYB7/1-129      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; 
#=GF SQ 23
Q2FY45/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
P65578/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
A0A1E8X1V1/1-129          MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKGHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
A0A380J7W5/1-129          MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
A0A1S5ZLG8/1-129          MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKGHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
A8Z464/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKGHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
Q2FGK9/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKGHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
A6QH69/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
P65577/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
Q6G941/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
P65579/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
A7X2Q3/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
A6U1Z6/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
A5IT53/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
Q5HFP7/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
A0A0E1AKK3/1-129          MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
W8UAI9/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
A0A0E1VGW9/1-129          MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
A0A0D1JN11/1-129          MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
Q6GGH4/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPNLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
A0A0E1X6W3/1-129          MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPNLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
A0A0Z4AZ24/1-129          MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPNLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
Q2YYB7/1-129              MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDGNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
#=GC scorecons            999999999999999999999999999999999998999999999999999996999999999996999999999999999999999999999999999999999999999999999999999999999
#=GC scorecons_70         *********************************************************************************************************************************
#=GC scorecons_80         *****************************************************_***********_***************************************************************
#=GC scorecons_90         ***********************************_*****************_***********_***************************************************************
//