# STOCKHOLM 1.0
#=GF ID 1.10.8.60/FF/000171
#=GF DE Lon protease
#=GF AC 1.10.8.60/FF/000171
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 79.626
#=GS O84348/528-626      AC O84348
#=GS O84348/528-626      OS Chlamydia trachomatis D/UW-3/CX
#=GS O84348/528-626      DE Lon protease
#=GS O84348/528-626      DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia trachomatis; 
#=GS O84348/528-626      DR EC; 3.4.21.53; 
#=GS Q8F0A0/513-605      AC Q8F0A0
#=GS Q8F0A0/513-605      OS Leptospira interrogans serovar Lai str. 56601
#=GS Q8F0A0/513-605      DE Lon protease
#=GS Q8F0A0/513-605      DR ORG; Bacteria; Spirochaetes; Spirochaetia; Leptospirales; Leptospiraceae; Leptospira; Leptospira interrogans; 
#=GS H3G7B9/500-624      AC H3G7B9
#=GS H3G7B9/500-624      OS Phytophthora ramorum
#=GS H3G7B9/500-624      DE Lon protease homolog
#=GS H3G7B9/500-624      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS B8C600/525-634      AC B8C600
#=GS B8C600/525-634      OS Thalassiosira pseudonana
#=GS B8C600/525-634      DE Lon protease homolog
#=GS B8C600/525-634      DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS Q9PK50/528-626      AC Q9PK50
#=GS Q9PK50/528-626      OS Chlamydia muridarum str. Nigg
#=GS Q9PK50/528-626      DE Lon protease
#=GS Q9PK50/528-626      DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia muridarum; 
#=GS Q9PK50/528-626      DR EC; 3.4.21.53; 
#=GS M6EXS1/513-605      AC M6EXS1
#=GS M6EXS1/513-605      OS Leptospira kirschneri serovar Bulgarica str. Nikolaevo
#=GS M6EXS1/513-605      DE Lon protease
#=GS M6EXS1/513-605      DR ORG; Bacteria; Spirochaetes; Spirochaetia; Leptospirales; Leptospiraceae; Leptospira; Leptospira kirschneri; 
#=GS Q72UP9/513-605      AC Q72UP9
#=GS Q72UP9/513-605      OS Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
#=GS Q72UP9/513-605      DE Lon protease
#=GS Q72UP9/513-605      DR ORG; Bacteria; Spirochaetes; Spirochaetia; Leptospirales; Leptospiraceae; Leptospira; Leptospira interrogans; 
#=GS Q72UP9/513-605      DR EC; 3.4.21.53; 
#=GS A0A0E2D7I1/513-605  AC A0A0E2D7I1
#=GS A0A0E2D7I1/513-605  OS Leptospira interrogans str. UI 12758
#=GS A0A0E2D7I1/513-605  DE Lon protease
#=GS A0A0E2D7I1/513-605  DR ORG; Bacteria; Spirochaetes; Spirochaetia; Leptospirales; Leptospiraceae; Leptospira; Leptospira interrogans; 
#=GS A0A0E2D7I1/513-605  DR EC; 3.4.21.53; 
#=GS A0A0E2CQZ1/513-605  AC A0A0E2CQZ1
#=GS A0A0E2CQZ1/513-605  OS Leptospira interrogans serovar Bataviae str. L1111
#=GS A0A0E2CQZ1/513-605  DE Lon protease
#=GS A0A0E2CQZ1/513-605  DR ORG; Bacteria; Spirochaetes; Spirochaetia; Leptospirales; Leptospiraceae; Leptospira; Leptospira interrogans; 
#=GS A0A0E2CQZ1/513-605  DR EC; 3.4.21.53; 
#=GS A0A0F6ID21/513-605  AC A0A0F6ID21
#=GS A0A0F6ID21/513-605  OS Leptospira interrogans str. FPW1039
#=GS A0A0F6ID21/513-605  DE Lon protease
#=GS A0A0F6ID21/513-605  DR ORG; Bacteria; Spirochaetes; Spirochaetia; Leptospirales; Leptospiraceae; Leptospira; Leptospira interrogans; 
#=GS A0A0F6ID21/513-605  DR EC; 3.4.21.53; 
#=GS A0A0F6HFE9/513-605  AC A0A0F6HFE9
#=GS A0A0F6HFE9/513-605  OS Leptospira interrogans str. UI 12621
#=GS A0A0F6HFE9/513-605  DE Lon protease
#=GS A0A0F6HFE9/513-605  DR ORG; Bacteria; Spirochaetes; Spirochaetia; Leptospirales; Leptospiraceae; Leptospira; Leptospira interrogans; 
#=GS A0A0F6HFE9/513-605  DR EC; 3.4.21.53; 
#=GS A0A0E9D5S8/528-626  AC A0A0E9D5S8
#=GS A0A0E9D5S8/528-626  OS Chlamydia trachomatis
#=GS A0A0E9D5S8/528-626  DE Lon protease
#=GS A0A0E9D5S8/528-626  DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia trachomatis; 
#=GS A0A0E9D5S8/528-626  DR EC; 3.4.21.53; 
#=GS G4NMS5/528-626      AC G4NMS5
#=GS G4NMS5/528-626      OS Chlamydia trachomatis A2497
#=GS G4NMS5/528-626      DE Lon protease
#=GS G4NMS5/528-626      DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia trachomatis; 
#=GS G4NMS5/528-626      DR EC; 3.4.21.53; 
#=GS A0A069ZYG7/528-626  AC A0A069ZYG7
#=GS A0A069ZYG7/528-626  OS Chlamydia muridarum
#=GS A0A069ZYG7/528-626  DE Lon protease
#=GS A0A069ZYG7/528-626  DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia muridarum; 
#=GS A0A069ZYG7/528-626  DR EC; 3.4.21.53; 
#=GF SQ 14
O84348/528-626              SGYILEEKLQIATKYLVPRARKEMGLSAQNV-----TFQPEALKHMINNYAREAGVRTLNENIKKVLRKVALKIVQNQE---------------------KNLSKKSRFTITPKNLQDYLGKPVF
Q8F0A0/513-605              SGYITDEKVQIFQKYLWKKVLYKNGVTPYGI-----EFDKKAIVALIDSYSRESGVRGLEKVTDKLVRKIAIKIVRKESFPKI---------------------------IQEKDLETFLGVPKF
H3G7B9/500-624              AGYDSPEKLAIAKEYLVPKALEKTGLQKAETTPESLGLTDDAILTLVKQYCRESGVRNLEKHVEKVFRKVALEVVEDIESAKAVEVQEAGEATEPVKETGEVSEDKDRFLITPEKLSKYVGKPIF
B8C600/525-634              SGYDVPEKLEIAQQYLVPKSMVNSGLMVKEIHEDDSTEKDNALESLVRWYCREAGVRNLAKKIDKITRLLSLQVVAEEEGAML---------------TDKSTRKSDTWEVSSDNLHEYVGKPIF
Q9PK50/528-626              SGYILEEKLQIATKYLVPRARKEMGLSAQNV-----SFQPEALKHMINNYAREAGVRTLNENIKKVLRKVALKIVQNQE---------------------KNPSKKSRFTITPKNLQDYLGKPIF
M6EXS1/513-605              SGYITDEKVQIFQKYLWKKVLYKNGITPYGI-----EFDKKAIVALIDSYSRESGVRGLEKVTDKLVRKIAIKIVRKESFPKI---------------------------ILEKDLETFLGVPKF
Q72UP9/513-605              SGYITDEKVQIFQKYLWKKVLYKNGVTPYGI-----EFDKKAIVALIDSYSRESGVRGLEKVTDKLVRKIAIKIVRKESFPKI---------------------------IQEKDLETFLGVPKF
A0A0E2D7I1/513-605          SGYITDEKVQIFQKYLWKKVLYKNGVTPYGI-----EFDKKAIVALIDSYSRESGVRGLEKVTDKLVRKIAIKIVRKESFPKI---------------------------IQEKDLETFLGVPKF
A0A0E2CQZ1/513-605          SGYITDEKVQIFQKYLWKKVLYKNGVTPYGI-----EFDKKAIVALIDSYSRESGVRGLEKVTDKLVRKIAIKIVRKESFPKI---------------------------IQEKDLETFLGVPKF
A0A0F6ID21/513-605          SGYITDEKVQIFQKYLWKKVLYKNGVTPYGI-----EFDKKAIVALIDSYSRESGVRGLEKVTDKLVRKIAIKIVRKESFPKI---------------------------IQEKDLETFLGVPKF
A0A0F6HFE9/513-605          SGYITDEKVQIFQKYLWKKVLYKNGVTPYGI-----EFDKKAIVALIDSYSRESGVRGLEKVTDKLVRKIAIKIVRKESFPKI---------------------------IQEKDLETFLGVPKF
A0A0E9D5S8/528-626          SGYILEEKLQIATKYLVPRARKEMGLSAQNV-----TFQPEALKHMINNYAREAGVRTLNENIKKVLRKVALKIVQNQE---------------------KNLSKKSRFTITPKNLQDYLGKPVF
G4NMS5/528-626              SGYILEEKLQIATKYLVPRARKEMGLSAQNV-----TFQPEALKHMINNYAREAGVRTLNENIKKVLRKVALKIVQNQE---------------------KNLSKKSRFTITPKNLQDYLGKPVF
A0A069ZYG7/528-626          SGYILEEKLQIATKYLVPRARKEMGLSAQNV-----SFQPEALKHMINNYAREAGVRTLNENIKKVLRKVALKIVQNQE---------------------KNPSKKSRFTITPKNLQDYLGKPIF
#=GC scorecons              79964599669456994575435496444560000046445963467549599699949564559659767667955551222000000000000000002111221221844659547794949
#=GC scorecons_70           ***___*****__***__*_____**_______________**__**__*_**_***_*_*___*__********___________________________________*__*_*__***_*_*
#=GC scorecons_80           ***___**__*___**__*_____*________________*____*__*_**_***_*_____*__**_*__**___________________________________*____*__*_*_*_*
#=GC scorecons_90           _**___**__*___**________*________________*_______*_**_***_*_____*__*______*___________________________________*____*____*_*_*
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