# STOCKHOLM 1.0
#=GF ID 1.10.8.60/FF/000169
#=GF DE 26S proteasome ATPase subunit S4
#=GF AC 1.10.8.60/FF/000169
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 70.553
#=GS P91025/354-431      AC P91025
#=GS P91025/354-431      OS Caenorhabditis elegans
#=GS P91025/354-431      DE Uncharacterized protein
#=GS P91025/354-431      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS E2RU38/368-445      AC E2RU38
#=GS E2RU38/368-445      OS Giardia lamblia ATCC 50803
#=GS E2RU38/368-445      DE 26S proteasome ATPase subunit S4, putative
#=GS E2RU38/368-445      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS H3EP23/249-331      AC H3EP23
#=GS H3EP23/249-331      OS Pristionchus pacificus
#=GS H3EP23/249-331      DE Uncharacterized protein
#=GS H3EP23/249-331      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS G0N700/355-432      AC G0N700
#=GS G0N700/355-432      OS Caenorhabditis brenneri
#=GS G0N700/355-432      DE Uncharacterized protein
#=GS G0N700/355-432      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS E3LGV3/354-432      AC E3LGV3
#=GS E3LGV3/354-432      OS Caenorhabditis remanei
#=GS E3LGV3/354-432      DE Uncharacterized protein
#=GS E3LGV3/354-432      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A8XCC1/354-435      AC A8XCC1
#=GS A8XCC1/354-435      OS Caenorhabditis briggsae
#=GS A8XCC1/354-435      DE Protein CBG11069
#=GS A8XCC1/354-435      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A261C1P8/354-432  AC A0A261C1P8
#=GS A0A261C1P8/354-432  OS Caenorhabditis latens
#=GS A0A261C1P8/354-432  DE Uncharacterized protein
#=GS A0A261C1P8/354-432  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A2G5UZ43/354-435  AC A0A2G5UZ43
#=GS A0A2G5UZ43/354-435  OS Caenorhabditis nigoni
#=GS A0A2G5UZ43/354-435  DE Uncharacterized protein
#=GS A0A2G5UZ43/354-435  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS E1EZ83/368-445      AC E1EZ83
#=GS E1EZ83/368-445      OS Giardia lamblia P15
#=GS E1EZ83/368-445      DE 26S proteasome ATPase subunit S4, putative
#=GS E1EZ83/368-445      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS A8W233/368-445      AC A8W233
#=GS A8W233/368-445      OS Giardia intestinalis
#=GS A8W233/368-445      DE 26S proteasome ATPase subunit S4
#=GS A8W233/368-445      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS A8W222/368-445      AC A8W222
#=GS A8W222/368-445      OS Giardia intestinalis
#=GS A8W222/368-445      DE 26S proteasome ATPase subunit S4
#=GS A8W222/368-445      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS C6M0E1/368-445      AC C6M0E1
#=GS C6M0E1/368-445      OS Giardia intestinalis ATCC 50581
#=GS C6M0E1/368-445      DE 26S proteasome ATPase subunit S4, putative
#=GS C6M0E1/368-445      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS A0A132NR19/391-468  AC A0A132NR19
#=GS A0A132NR19/391-468  OS Giardia intestinalis assemblage B
#=GS A0A132NR19/391-468  DE Putative 26S proteasome ATPase subunit S4/P45
#=GS A0A132NR19/391-468  DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS V6TVH1/391-468      AC V6TVH1
#=GS V6TVH1/391-468      OS Giardia intestinalis
#=GS V6TVH1/391-468      DE 26S proteasome subunit, P45 family protein
#=GS V6TVH1/391-468      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GF SQ 14
P91025/354-431              PDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDFEKAVKSVMLSK--KGG----
E2RU38/368-445              ----ARRQIFKIHTRRMMLDKDIVEDEILNCKDDLSGADIKAITLEAGLLALRDRRIRVCMSDFRKARDKVLYKKIQEVGDL--
H3EP23/249-331              -DQKTKLKIFGIHTSGMHMDKDVSFEALLAKEKEASGADIKAMCTEAGMLALRAQRKVVCMADFEKAMKTVLLKDVNNIGAAFY
G0N700/355-432              -DEKTRQKIFGIHTSGMTLQKAVTYDSVLGKEKSISGAEIKAVCTEAGMMALRSQRKCVGTEDFEKALKSVLLSK--KAGA---
E3LGV3/354-432              PDEKTRQKIFGIHTSGMTLQKAVTYDSVLGKEKSISGAEIKAVCTEAGMMALRSQRKCVSTDDFEKALKSVMLNK--KAGA---
A8XCC1/354-435              PDEKTRQKIFGIHTSGMTLQKAVTYESVLGKEKSISGAEIKAVCTEAGMMALRSQRKCVGADDFEKALKSVMLSK--KAGAPES
A0A261C1P8/354-432          PDEKTRQKIFGIHTSGMTLQKAVTYDSVLGKEKSISGAEIKAVCTEAGMMALRSQRKCVSTDDFEKALKSVMLNK--KAGA---
A0A2G5UZ43/354-435          PDEKTRQKIFGIHTSGMTLQKAVTYDSVLGKEKSISGAEIKAVCTEAGMMALRSQRKCVGADDFEKALKSVMLSK--KAGAPES
E1EZ83/368-445              ----ARRQIFKIHTRKMMLDKDIIEDEILNCKDDLSGADIKAITLEAGLLALRDRRIRVCMSDFRKARDKVLYKKIQEVGDL--
A8W233/368-445              ----ARRQIFKIHTRRMMLDKDIVEDEILNCKDDLSGADIKAITLEAGLLALRDRRIRVCMSDFRKARDKVLYKKIQEVGDL--
A8W222/368-445              ----ARRQIFKIHTRRMMLDKDIVEDEILNCKDDLSGADIKAITLEAGLLALRDRRIRVCMSDFRKARDKVLYKKIQEVGDL--
C6M0E1/368-445              ----ARRQIFKIHTRKMMLDKDIVEDEILNCKDDLSGADIKAITLEAGLLALRDRRIRVCMSDFRKARDKVLYKKIQEVGDL--
A0A132NR19/391-468          ----ARRQIFKIHTRKMMLDKDIVEDEILNCKDDLSGADIKAITLEAGLLALRDRRIRVCMSDFRKARDKVLYKKIQEVGDL--
V6TVH1/391-468              ----ARRQIFKIHTRKMMLDKDIVEDEILNCKDDLSGADIKAITLEAGLLALRDRRIRVCMSDFRKARDKVLYKKIQEVGDL--
#=GC scorecons              122268569949995595759575474695465559997999655999669994694495549959945496557215594200
#=GC scorecons_70           ____**_***_***__*_*_*_*__*_**______********__********_**__*___**_**___**__*____*____
#=GC scorecons_80           _____*__**_***__*_*_*____*__*______***_***___***__***__*__*___**_**___*___*____*____
#=GC scorecons_90           _____*__**_***__*___*_______*______***_***___***__***__*__*___**_**___*________*____
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