# STOCKHOLM 1.0
#=GF ID 1.10.8.60/FF/000151
#=GF DE ATP dependent metalloprotease
#=GF AC 1.10.8.60/FF/000151
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 57.214
#=GS P39925/460-540      AC P39925
#=GS P39925/460-540      OS Saccharomyces cerevisiae S288C
#=GS P39925/460-540      DE Mitochondrial respiratory chain complexes assembly protein AFG3
#=GS P39925/460-540      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P39925/460-540      DR GO; GO:0001302; GO:0002181; GO:0005515; GO:0005739; GO:0005743; GO:0005745; GO:0006465; GO:0006508; GO:0008237; GO:0016887; GO:0030150; GO:0034622; GO:0097002; 
#=GS Q5AJC2/457-554      AC Q5AJC2
#=GS Q5AJC2/457-554      OS Candida albicans SC5314
#=GS Q5AJC2/457-554      DE AAA family ATPase
#=GS Q5AJC2/457-554      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS Q5AJC2/457-554      DR GO; GO:0005886; 
#=GS Q6CHB1/497-578      AC Q6CHB1
#=GS Q6CHB1/497-578      OS Yarrowia lipolytica CLIB122
#=GS Q6CHB1/497-578      DE YALI0A10615p
#=GS Q6CHB1/497-578      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS Q75EQ4/423-505      AC Q75EQ4
#=GS Q75EQ4/423-505      OS Eremothecium gossypii ATCC 10895
#=GS Q75EQ4/423-505      DE AAR025Cp
#=GS Q75EQ4/423-505      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS R9XC24/433-515      AC R9XC24
#=GS R9XC24/433-515      OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9XC24/433-515      DE AaceriAAR025Cp
#=GS R9XC24/433-515      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS A0A0L8VRW1/460-540  AC A0A0L8VRW1
#=GS A0A0L8VRW1/460-540  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VRW1/460-540  DE AFG3p Mitochondrial inner membrane m-AAA protease component
#=GS A0A0L8VRW1/460-540  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS H0GTS0/397-477      AC H0GTS0
#=GS H0GTS0/397-477      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GTS0/397-477      DE Afg3p
#=GS H0GTS0/397-477      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8RKF1/462-542  AC A0A0L8RKF1
#=GS A0A0L8RKF1/462-542  OS Saccharomyces eubayanus
#=GS A0A0L8RKF1/462-542  DE AFG3-like protein
#=GS A0A0L8RKF1/462-542  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS B9WDE1/456-555      AC B9WDE1
#=GS B9WDE1/456-555      OS Candida dubliniensis CD36
#=GS B9WDE1/456-555      DE Mitochondrial respiratory chain complexes assembly protein, putative
#=GS B9WDE1/456-555      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; 
#=GS G2WCP9/460-540      AC G2WCP9
#=GS G2WCP9/460-540      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WCP9/460-540      DE K7_Afg3p
#=GS G2WCP9/460-540      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1PA83/460-540      AC N1PA83
#=GS N1PA83/460-540      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1PA83/460-540      DE Afg3p
#=GS N1PA83/460-540      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZQW5/460-540      AC A6ZQW5
#=GS A6ZQW5/460-540      OS Saccharomyces cerevisiae YJM789
#=GS A6ZQW5/460-540      DE ATP dependent metalloprotease
#=GS A6ZQW5/460-540      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GF03/424-504      AC H0GF03
#=GS H0GF03/424-504      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GF03/424-504      DE Afg3p
#=GS H0GF03/424-504      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS B3LS29/460-540      AC B3LS29
#=GS B3LS29/460-540      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LS29/460-540      DE ATP dependent metalloprotease
#=GS B3LS29/460-540      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GKJ5/460-540      AC C7GKJ5
#=GS C7GKJ5/460-540      OS Saccharomyces cerevisiae JAY291
#=GS C7GKJ5/460-540      DE Afg3p
#=GS C7GKJ5/460-540      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C4YPV3/457-554      AC C4YPV3
#=GS C4YPV3/457-554      OS Candida albicans WO-1
#=GS C4YPV3/457-554      DE Uncharacterized protein
#=GS C4YPV3/457-554      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS A0A1D8N4D7/497-578  AC A0A1D8N4D7
#=GS A0A1D8N4D7/497-578  OS Yarrowia lipolytica
#=GS A0A1D8N4D7/497-578  DE Peptidase family M41-domain-containing protein
#=GS A0A1D8N4D7/497-578  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GF SQ 17
P39925/460-540              PDVNGRQQIYLVHLKRLNLDP------LLT------------DDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGL-
Q5AJC2/457-554              PDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQLKNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAG--
Q6CHB1/497-578              PDMEGRKQIFAVHLAKLTLSP------EIK------------KDMDYVKGKLATLTPGFAGADIANCCNEAALIAARDNSVDVKFDHFERAIERVIAGIE
Q75EQ4/423-505              PDVEGRKAIYKVHLSKLNLDP------SLKTTP---------DTLDNFAGKLAALTPGFAGADISNACNEAALIAARHNDAFVEFRHFDQAIERVIAG--
R9XC24/433-515              PDVEGRKAIYKVHLSKLNVDP------SLKTTP---------ETLDNFAGKLAALTPGFAGADISNACNEAALIAARHNDAFVEFRHFDQAIERVIAG--
A0A0L8VRW1/460-540          PDVNGRQQIYLVHLKRLNLDP------LLT------------DDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGL-
H0GTS0/397-477              PDVNGRQQIYLVHLKRLNLDP------LLT------------DDMGNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGL-
A0A0L8RKF1/462-542          PDVNGRQQIYLVHLRKLNLDP------LLK------------DDMDNLSGKLATLTPGFTGADIANACNEAALIAARHNDQYITIYHFEQAIERVIAGL-
B9WDE1/456-555              PDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQLKNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPSVDTYHFEQAIERVIAGLE
G2WCP9/460-540              PDVNGRQQIYLVHLKRLNLDP------LLT------------DDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGL-
N1PA83/460-540              PDVNGRQQIYLVHLKRLNLDP------LLT------------DDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGL-
A6ZQW5/460-540              PDVNGRQQIYLVHLKRLNLDP------LLT------------DDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGL-
H0GF03/424-504              PDVNGRQQIYLVHLKRLNLDP------LLT------------DDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGL-
B3LS29/460-540              PDVNGRQQIYLVHLKRLNLDP------LLT------------DDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGL-
C7GKJ5/460-540              PDVNGRQQIYLVHLKRLNLDP------LLT------------DDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGL-
C4YPV3/457-554              PDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQLKNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAG--
A0A1D8N4D7/497-578          PDMEGRKQIFAVHLAKLTLSP------EIK------------KDMDYVKGKLATLTPGFAGADIANCCNEAALIAARDNSVDVKFDHFERAIERVIAGIE
#=GC scorecons              9976996797499947958560000003450000000000006565565979969999969999795999699999956553744499879999999930
#=GC scorecons_70           ***_******_***_**_*_*_______________________*__*_*****************_**********_*___*___************__
#=GC scorecons_80           ***_**_***_***_**_*______________________________****_*****_******_***_******_________************__
#=GC scorecons_90           **__**__*__***__*_*______________________________*_**_*****_****_*_***_******_________**__********__
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