# STOCKHOLM 1.0
#=GF ID 1.10.8.590/FF/000004
#=GF DE tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ
#=GF AC 1.10.8.590/FF/000004
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 89.528
#=GS A0A0H2ZF87/178-255  AC A0A0H2ZF87
#=GS A0A0H2ZF87/178-255  OS Pseudomonas aeruginosa UCBPP-PA14
#=GS A0A0H2ZF87/178-255  DE tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ
#=GS A0A0H2ZF87/178-255  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A0H2ZF87/178-255  DR EC; 2.1.1.200; 
#=GS Q7NIP3/169-239      AC Q7NIP3
#=GS Q7NIP3/169-239      OS Gloeobacter violaceus PCC 7421
#=GS Q7NIP3/169-239      DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS Q7NIP3/169-239      DR ORG; Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacteraceae; Gloeobacter; Gloeobacter violaceus; 
#=GS Q83CI4/172-239      AC Q83CI4
#=GS Q83CI4/172-239      OS Coxiella burnetii RSA 493
#=GS Q83CI4/172-239      DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS Q83CI4/172-239      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae; Coxiella; Coxiella burnetii; 
#=GS Q74D44/178-254      AC Q74D44
#=GS Q74D44/178-254      OS Geobacter sulfurreducens PCA
#=GS Q74D44/178-254      DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS Q74D44/178-254      DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter; Geobacter sulfurreducens; 
#=GS Q55896/163-239      AC Q55896
#=GS Q55896/163-239      OS Synechocystis sp. PCC 6803 substr. Kazusa
#=GS Q55896/163-239      DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS Q55896/163-239      DR ORG; Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis; Synechocystis sp. PCC 6803; 
#=GS A0A157TAG8/178-255  AC A0A157TAG8
#=GS A0A157TAG8/178-255  OS Enterobacter cloacae
#=GS A0A157TAG8/178-255  DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS A0A157TAG8/178-255  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex; Enterobacter cloacae; 
#=GS A0A157TAG8/178-255  DR EC; 2.1.1.200; 
#=GS A0A1G5LIC0/178-255  AC A0A1G5LIC0
#=GS A0A1G5LIC0/178-255  OS Acinetobacter baumannii
#=GS A0A1G5LIC0/178-255  DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS A0A1G5LIC0/178-255  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex; Acinetobacter baumannii; 
#=GS A0A1G5LIC0/178-255  DR EC; 2.1.1.200; 
#=GS A0A1S1BY51/178-255  AC A0A1S1BY51
#=GS A0A1S1BY51/178-255  OS Pseudomonas sp. HMSC059F05
#=GS A0A1S1BY51/178-255  DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS A0A1S1BY51/178-255  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC059F05; 
#=GS A0A1S1BY51/178-255  DR EC; 2.1.1.200; 
#=GS A0A3S5E4G9/178-255  AC A0A3S5E4G9
#=GS A0A3S5E4G9/178-255  OS Pseudomonas fluorescens
#=GS A0A3S5E4G9/178-255  DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS A0A3S5E4G9/178-255  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens; 
#=GS A0A3S5E4G9/178-255  DR EC; 2.1.1.200; 
#=GS A0A1F0ICF0/178-255  AC A0A1F0ICF0
#=GS A0A1F0ICF0/178-255  OS Pseudomonas sp. HMSC065H01
#=GS A0A1F0ICF0/178-255  DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS A0A1F0ICF0/178-255  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC065H01; 
#=GS A0A1F0ICF0/178-255  DR EC; 2.1.1.200; 
#=GS A0A2V2THQ3/178-255  AC A0A2V2THQ3
#=GS A0A2V2THQ3/178-255  OS Pseudomonas sp. RW410
#=GS A0A2V2THQ3/178-255  DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS A0A2V2THQ3/178-255  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. RW410; 
#=GS A0A2V2THQ3/178-255  DR EC; 2.1.1.200; 
#=GS W1MHY8/178-255      AC W1MHY8
#=GS W1MHY8/178-255      OS Pseudomonas aeruginosa VRFPA03
#=GS W1MHY8/178-255      DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS W1MHY8/178-255      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS W1MHY8/178-255      DR EC; 2.1.1.200; 
#=GS A0A1C7BIW8/178-255  AC A0A1C7BIW8
#=GS A0A1C7BIW8/178-255  OS Pseudomonas aeruginosa BL04
#=GS A0A1C7BIW8/178-255  DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS A0A1C7BIW8/178-255  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A1C7BIW8/178-255  DR EC; 2.1.1.200; 
#=GS A0A072ZPM2/178-255  AC A0A072ZPM2
#=GS A0A072ZPM2/178-255  OS Pseudomonas aeruginosa
#=GS A0A072ZPM2/178-255  DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS A0A072ZPM2/178-255  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A072ZPM2/178-255  DR EC; 2.1.1.200; 
#=GS A0A3S3TW13/178-255  AC A0A3S3TW13
#=GS A0A3S3TW13/178-255  OS Pseudomonas aeruginosa
#=GS A0A3S3TW13/178-255  DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS A0A3S3TW13/178-255  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS Q9HXI5/178-255      AC Q9HXI5
#=GS Q9HXI5/178-255      OS Pseudomonas aeruginosa PAO1
#=GS Q9HXI5/178-255      DE tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
#=GS Q9HXI5/178-255      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GF SQ 16
A0A0H2ZF87/178-255          ---SMLNTELVTADELELYYAHLERTLIDIGFLDPEKPRHLMSRLRRLYGRSAISKLEMNILRGILTETQKVARGLSYKRS
Q7NIP3/169-239              ---------MPEAEVLEGFYGHLERTLLAIGYLQEHTAERKLEKFRRLFNRAGLTAQEVALLRGVLRQIDWASTQNPARQ-
Q83CI4/172-239              -------QQLATADQMEGFYVHLEKTLVDIKFIDPKQPKMLMKRLRRLFNRAQIDETELNILRGILASIHRRDDC------
Q74D44/178-254              ----GEDRPLAGSAETEPLFEHMERTLMRIGYLNPQNPAHLMRSLRRIFARSELDSREVAILRGMMTQIDWAADQFKGKKG
Q55896/163-239              RLEDGSTMPLATNAQLDSYCQHLEKTLLNIEVLYPHTARSKMAKFRRIYQRAALNSEEVALLRGILGQIDWLAQQIK----
A0A157TAG8/178-255          ---SMLNTELVTADELELYYAHLERTLIDIGFLDPEKPRHLMSRLRRLYGRSAISKLEMNILRGILTETQKVARGLSYKRS
A0A1G5LIC0/178-255          ---SMLNTELVTADELELYYAHLERTLIDIGFLDPEKPRHLMSRLRRLYGRSAISKLEMNILRGILTETQKVARGLSYKRS
A0A1S1BY51/178-255          ---SMLNTELVTADELELYYAHLERTLIDIGFLDPEKPRHLMSRLRRLYGRSAISKLEMNILRGILTETQKVARGLSYKRS
A0A3S5E4G9/178-255          ---SMLNTELVTADELELYYAHLERTLIDIGFLDPEKPRHLMSRLRRLYGRSAISKLEMNILRGILTETQKVARGLSYKRS
A0A1F0ICF0/178-255          ---SMLNTELVTADELELYYAHLERTLIDIGFLDPEKPRHLMSRLRRLYGRSAISKLEMNILRGILTETQKVARGLSYKRS
A0A2V2THQ3/178-255          ---SMLNTELVTADELELYYAHLERTLIDIGFLDPEKPRHLMSRLRRLYGRSAISKLEMNILRGILTETQKVARGLSYKRS
W1MHY8/178-255              ---SMLNTELVTADELELYYAHLERTLIDIGFLDPEKPRHLMSRLRRLYGRSAISKLEMNILRGILTETQKVARGLSYKRS
A0A1C7BIW8/178-255          ---SMLNTELVTADELELYYAHLERTLIDIGFLDPEKPRHLMSRLRRLYGRSAISKLEMNILRGILTETQKVARGLSYKRS
A0A072ZPM2/178-255          ---SMLNTELVTADELELYYAHLERTLIDIGFLDPEKPRHLMSRLRRLYGRSAISKLEMNILRGILTETQKVARGLSYKRS
A0A3S3TW13/178-255          ---SMLNTELVTADELELYYAHLERTLIDIGFLDPEKPRHLMSRLRRLYGRSAISKLEMNILRGILTETQKVARGLSYKRS
Q9HXI5/178-255              ---SMLNTELVTADELELYYAHLERTLIDIGFLDPEKPRHLMSRLRRLYGRSAISKLEMNILRGILTETQKVARGLSYKRS
#=GC scorecons              000222233755655683664979799549667464465457456996749656443955699977556544644332332
#=GC scorecons_70           _________*_____**_**_******__*__*_*__*___*__*****_*__*___*__******_______________
#=GC scorecons_80           _________*______*____******__*__*________*___**_*_*______*___***_*_______________
#=GC scorecons_90           _____________________*_*_**__*_______________**___*______*___***_________________
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