# STOCKHOLM 1.0
#=GF ID 1.10.630.10/FF/000099
#=GF DE Uncharacterized protein
#=GF AC 1.10.630.10/FF/000099
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 65.532
#=GS C3YES8/2-373   AC C3YES8
#=GS C3YES8/2-373   OS Branchiostoma floridae
#=GS C3YES8/2-373   DE Uncharacterized protein
#=GS C3YES8/2-373   DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZPD2/1-434   AC C3ZPD2
#=GS C3ZPD2/1-434   OS Branchiostoma floridae
#=GS C3ZPD2/1-434   DE Uncharacterized protein
#=GS C3ZPD2/1-434   DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZV17/1-423   AC C3ZV17
#=GS C3ZV17/1-423   OS Branchiostoma floridae
#=GS C3ZV17/1-423   DE Uncharacterized protein
#=GS C3ZV17/1-423   DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZPD1/1-450   AC C3ZPD1
#=GS C3ZPD1/1-450   OS Branchiostoma floridae
#=GS C3ZPD1/1-450   DE Uncharacterized protein
#=GS C3ZPD1/1-450   DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3XSV5/28-499  AC C3XSV5
#=GS C3XSV5/28-499  OS Branchiostoma floridae
#=GS C3XSV5/28-499  DE Uncharacterized protein
#=GS C3XSV5/28-499  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZPC9/29-497  AC C3ZPC9
#=GS C3ZPC9/29-497  OS Branchiostoma floridae
#=GS C3ZPC9/29-497  DE Uncharacterized protein
#=GS C3ZPC9/29-497  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZVH7/27-507  AC C3ZVH7
#=GS C3ZVH7/27-507  OS Branchiostoma floridae
#=GS C3ZVH7/27-507  DE Uncharacterized protein
#=GS C3ZVH7/27-507  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZVF5/1-436   AC C3ZVF5
#=GS C3ZVF5/1-436   OS Branchiostoma floridae
#=GS C3ZVF5/1-436   DE Uncharacterized protein
#=GS C3ZVF5/1-436   DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZPD5/1-428   AC C3ZPD5
#=GS C3ZPD5/1-428   OS Branchiostoma floridae
#=GS C3ZPD5/1-428   DE Uncharacterized protein
#=GS C3ZPD5/1-428   DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZPD4/27-500  AC C3ZPD4
#=GS C3ZPD4/27-500  OS Branchiostoma floridae
#=GS C3ZPD4/27-500  DE Uncharacterized protein
#=GS C3ZPD4/27-500  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZPD0/29-500  AC C3ZPD0
#=GS C3ZPD0/29-500  OS Branchiostoma floridae
#=GS C3ZPD0/29-500  DE Uncharacterized protein
#=GS C3ZPD0/29-500  DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZPD8/1-437   AC C3ZPD8
#=GS C3ZPD8/1-437   OS Branchiostoma floridae
#=GS C3ZPD8/1-437   DE Uncharacterized protein
#=GS C3ZPD8/1-437   DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZPD7/1-442   AC C3ZPD7
#=GS C3ZPD7/1-442   OS Branchiostoma floridae
#=GS C3ZPD7/1-442   DE Uncharacterized protein
#=GS C3ZPD7/1-442   DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS C3ZPD6/1-434   AC C3ZPD6
#=GS C3ZPD6/1-434   OS Branchiostoma floridae
#=GS C3ZPD6/1-434   DE Uncharacterized protein
#=GS C3ZPD6/1-434   DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GF SQ 14
C3YES8/2-373           ---------------------------------------------------------------------------------------------------NQAYKEKRKFAYSALRNLGMRMGEGSMDR--REHQIRGSSA-LSE-G-DAQSR-----DIADSLTVSVANIICSMVFGKRYDYDDVKFVELTKIINKQVAKF--GSSQLMTVFSFLRFMPGVNSSNRILVECIDEVHAFLRQEITKHRETLDNENPRDFIDLLLTELQTQEHTDCFTEDNIVWIIQDLFVAGMGTTANTLRWGLLYIVLCPEEQQRVQAELDSVLGTGHDVPTPAHRSQPPYTEATIMEIQRIRAIAPLSGPHAPNEDTTFRGYDIPAGTQVIMNKSAIHSGLTSHNDIFTI-IQLFLDSDGKVVTRPESF---------IPFSTG---------RRACLGEQLAKMELFLLFSSLLKHFTLKLPEGAAAPSTDGCMGITLVPPRVNICITKR
C3ZPD2/1-434           --------------------------------LTEWRKQYGDVYTVRMGMEDVVVLNGYRAIKEALVDYKDAFSSRPNVYMLNLVSGFGKG--IGLTKFDHVYKEKRKFAYSALRNLGMRMGPGSMEENIREEARQLW---------DAQAR-----DIADNLTVSVANIICSMVFGKRYDYDDVKFVELTKIVNKLHAQL--KSSQLMTVFPFLRFIPGGRIVFVILFEYLNEVHTFIRQEITKHRETLDNKNPRDFIDLLLNELQTQEHTDCFTEENIVWIVQGLFLAGVETTANSLRWGLLYMVLCPEEQHKVQAELDSVLGADHDVPTLAHRSQLPYTEATIMEIQRIRAILPLNLPHATNEDTTFRGYDIPAGTQVLPNLWSANMDPEFWPDPEKFDPRRFLDSDGKVVTRQESF---------LPFSAG---------RRVCIGEQLAKMELFLLFSSLLKHFTFKLPEGAAAPSTDGSLGITLVPPGVNICITKR
C3ZV17/1-423           -----------------------------------------------MGMEDVVVLNGCRAIKEALVDYKDAFSSRPSVYVLNLFSGFGK-----------TYKEKRKFAYSALRNLGMRMGPGSMEENIREEGRQLCL--LSEQG-DANPR-----DIADNLTVSVANITCSMVFGKRYDYDDVTFVELTKSINKLFAEL--GSSQLMTVFPFLRFVPGVNSSNRIIVECLNEVQAYLRHEITKHRENLDNENPRDFIDLLLTELQTQEKTDCLTEENIVFIIQDLFTAGVETTATTLRWGLLYMVLCPEEQQKVQAELDSILGTDHDVPTLAHRSQLPYTEATIMEIQRIRAIGPLGGPHAPNEDTAFRGYDIPSGTQVLPNLWSAHMDPEFWPDPEKFDPRRFLDSDGNVVRRQESF---------MPFSTGKFF--FSNGRRACIGEQLAKMELFLLFSSLLRHFTFKLPEGAAAPSTVGCLGLTYVPPTVNMCITKR
C3ZPD1/1-450           ---------------------------APHLKLTEWRKQYGDVYTVRMGMEDVVVLNGYRAIKEALVDYKDAFSNRPDVYLLNLISGFGKD--IAISKFNQAYKEKRKFAYSALRNLGMRMGPGSMEENIREEARQLCMK-LSEQG-DAHPR-----DITDNLTVSVANIICSMVFGKRYDYDDEKFVELSKIVNKVAAQV--GSSQLMAVFPFLRFIPG--GKILILVECIEETHAFLREEITQHHETLDNENPRDFIDLLLNELQ---KTDCFTEENIDWIIQDLFFAGIETTVTSLRWGLLFMVLCPEEQQKVQAELDSVLGTDHDVPTLAHRSQLPYTEATIMEIQRIRAILPLGVPRAPNENTTFRGYDIPAGTQVLPNLWSAHMDPEYWSDPEKFDPRRFLDSDGKVVTRPESF---------MPFSTGKFFSKSTRSRRVCLGEQLAKMELFLIFSSLLKHFTFKLREGAAAPSTDGHMTITLVPPTINMCINRR
C3XSV5/28-499          -FKRRKNLPPSPSGSWPVVGHLLSLGRAPHLKLTEWRKQYGDVYTVRMGMEDVVVLNGYRAIKEALVDYKDAFSSRPNVYVLNLVSGFGKD--IAFTKFNPAYLEKRRFAVSALKNLGMKMGPGSVEEHIREEARQLCLK-LSEQG-DAHPR-----DIADSLTVSVSNIVCSMVFGKRYDHDDEKFVELMKIVHKVLSQLEHGSSQLMMVFPFLRFIPGVNSTNRILVECINKVHEFLRQEITKHREILDSENPRDFIDLILTELQTKEKTDCFTEENIVWIIQNMFFAGTETTANTLRWGILYMVLCPEEQQKVQSELDSVLGTDHDVPTLAHRSQLPYTEATIMETQRIRLVAPLNAPHAPNEDTTFRGYDIPAGTQVLTNLWSAHMDPEYWANPEKFDPRRFLDTEGKVVSRPDSY---------LPFSAG---------RRVCLGEQLAKMELFLLFSSLLKHFTFKLPEGAAAPSADDCMRVT--PPRVNMCITRR
C3ZPC9/29-497          -FKRRKNLPPSPSGSWPVVGHLLSLGRAPHLKLTEWRKQYGDVYTVRMGMEDVVVLNGYRAIKEALVDYKDAFSSRPSVYLLNLVSGFGKD--IALSKFNQAYLEKRRFAASALKTLGMRMGPGSVEEHIREEARQLCIK-LSEQG-DGHPR-----DIADNLTVSVANIICSMVFGKRYGYDDEKFVELTKIIHKLLSQFEHGSSQLMTVFPFLRFVPG---ANRILVECINKVHEFLRQEIIKHRETLDNENPRDFIDLILTELQTQEQTDCFTEENIVWIIQNMFFAGMETTANTLRWGLLYMVLCPEEQQKVHAELDSVLGTDHDVPTLAHRSQLPYTEATIMEIQRIRLVAPLNAPHAATEDTTFRGYDIPAGMQVLTNLWSAHMDPEYWPDPETFDPRRFLDSDGKVVSRPDSY---------LPFSAG---------RRVCLGEQLAKMELFLLFSSLLKHFTLKLPEGVAAPSADDCMGLS--PPTVNMCVTRR
C3ZVH7/27-507          FFKRRKNLPPSPSGSWPVVGHLLSLGRAPHLKLTEWRKRYGDVYTVRMGMEDVVVLNGCRAIKEALVDYKDAFSSRPSVYVLNLISGFGKN--IGVSKFNQAYKEKRKFAYSALRNLGIKMGPGSMEESIREEGRQLCLK-LSEQG-DARPR-----DITDNLTVSVANIICSMVFGKRYDYDDVTFVELTKSINKLVAQL--GSSQLMAVFPFLRFIPGVNSSNRVLVECLNEVQAYLRHEITKHRENLDNENPRDFIDLLLTELQTQEKTDCLTEENIMFIIQDLFTAGVGTTVTTLRWGLLYMVLCPEEQQKVQAELDSILGTDHDVPTLAHRSQLPYTEATIMEILRIRSIVPL-TPHAPNEDTTFRGYDIPSGTQVLPILWSAHMDPEFWPDPEKFNPCRFLDADGKVVTRPESIICLFFNFFSLSYSTG---------RRACLGKQLAKMELFLLFSSLLKHFTFKLPEGAAAPSTDGCLGLTLAPPIVNMCIIQR
C3ZVF5/1-436           --KRRKNLPPSPSGSWPVVGHLLSLGRAPHLKLTEWRKQYGDVYTVRMGMEDVVVLNGCRAIKEALVDYKDAFSSRPSVYVLNLFSGFGK-----------TYKEKRKFAYSALRNLGIKMGPGSMEESIREEGRQLCLK-LSEQG-DANPR-----DIADNLTVSVANITCSMVFGKRYDYDDVTFVELTKSINKLFAEL--GSSQLMTVFPFLRFVPGVNSSNRIIVECLNEVQAYLRHEITKHRENLDTENPRDFIDLLLTELQTQEKTDCFTEENIVFIIQDLFTAGVETTASTLRWGLLYMVLSPEEQQKVQAELDSILGTDHDVPTLAHRSQLPYTEATIMEIQRIRAIGPLGGPHAPNEDTTFRGYDIPSGTQVLPNLWSAHMDPEFWPDPEKFDPRRFLDSGGNVVRRQESF---------MPFSTG---------RRACIGEQLAKMELFLLFSSLVKHFTFKLPEG--------------------------
C3ZPD5/1-428           ----------------PVVGHLLSLGRAPHLKLTEWRKQYGDVYTVRMGMEDVVVLNGYRAIKEALVDYKDAFSSRPNVYVLNLVSGFGKGTCVLLSNF-RTYLEKRKFAYSALRNLGMRMGPGSMEENIRDEARQLCLK-LSEQG-DAKPR-----DITDNLTVSVANIICSMVFGKRYDYDDEKFLELSKIVNKLVASV--GSSQLMTVFPFLRFIPGVNSTNRILLECIEDVHEFLRQEITKHRETLDNENPRDFIDLILTELQTQEKTDCFTEENIVWMIQDLFVAGIETTITTLRWGLLYMVLCPEEQQKVQAELDSVLGTDHDVPTLAHRSQLPYTEATIMEIQRIRAIVPLSAPHAPNEDTTFRGYDIPAGTQVFPSLWSANMDPEFWPNPEKFDPRRFLDSDGKVVTRPESF---------MPFSTG---------RRVCLGEQLAKMELFLLFSSLLKHFTFK------------------------------
C3ZPD4/27-500          FFKRRKNLPPSPSGSWPVVGHLLSLGRAPHLKLTEWRKQYGDVYTVRMGMEDVVVLNGYRAIKEALVDYKDAFSSRPNIYMFNLLTGFGKD--IGLAKFNQAYKEKRKFAYSALRNLGMRMGPGSVEENIRDEARQLCLK-LSEQGPDAQAR-----DIADNLTVSVANIICSMVFGKRYDYDDVKFVELTKIVNKLIAQL--GSSQLMTVFPFLRFIPGVNSPKRILVEGINEVHVFLRQEITKHRETLDNENPRDFIDLLLIELQTQDKTDCVTEENIVWIIQDMFFAGIETTATTLRWGLLYMVLCPQEQQKVQAELDSVLGTGHDVPTLAHRSQLPYTKATVMEIQRIRAIVPLSSPHAPNEDTTFRGYDIPAGTQVLPNLWSANMDPEFWPDPEKFDPGRFLESDGKVVTRPESF---------MPFSTG---------RRVCLGEQLAKMELFLLFSSLLKHFTFKLPEGAAAPSTDGCMGITLVPPTINMCMSQR
C3ZPD0/29-500          -FKRRKMDPPSPSGSWPVVGHLLSLGRAPHLKLTEWRKQYGDVYTVRMGMEDVVVLNGYRAIKEALVDYKDAFSSRPNVYVLNLVSGFGED--IVMSPFNQAYKEKRKFAYSALRTLGMRMGPGSMEENIRDEARQLCLK-LSEQG-DAQPS-----DITDNLTVSVANIICSMVFGKRYDYDDENFLELSKVANKLVAQL--GSSQLMTVFPILRFVPGVNSSNRILVECMEEVHAFLRQEITKHRETMDKENPRDFIDLLLAELETQEKTDCFKEENIEWIIQDLFVAGVETTATTLRWGLLYMVLCPEEQQKVQAELDSVLGADHDVPTLAHRSQLPYTEATIMEIQRIRAIVPLAAPHTPNENTTFRGYDIPAGTQVFPNLWSANMDPEFWPDPEKFDPRRFLDSDGKVVTRPESY---------MPFSTG---------RRVCLGEQLAKMELFLLFSSLLKHVTFKLPEGAAAPSTDGCMGITLVPSRINMCISQR
C3ZPD8/1-437           --------------------------------LTEWRKQYGDVYTVRMGMEDVVVLNGYRAIKEALVDYKDAFSSRPNNYVLSLLTGFGKD--IVFSPFNQAYKEKRKFAYSALRNLGMRMGPGSVEENIREEARQLCLK-LSEQG-GAQPR-----DTADNLTVSVANIICSMVFGKRYDYDDEKFLQLSKIVNKLVARV--GSSQLMMVFPFLRFVPG----GRALLQIAKEVIAFVRQEITKHRETLDSENPRDFIDLLLIELQTQNKTDCFTEENIVWIIQDLFVAGLETTTTTLRWGLLYMVLCPEEQQKVQAELDSVLGTGHDVPTLAHRSQLPYTEATIMEIQRIRTITPLSGPHATTENTTFRGYAIPAGTQVFPNLWSANMDPEYWPDPEKFDPRRFLDSDVKLVTRPESF---------MPFSTG---------RRVCLGEQLAKMELFLLFSSLLKHFTFKLPEGAAAPSTDGITGITLVPPKVNMCITKC
C3ZPD7/1-442           ---------------------------APHLKLTEWRKQYGDVYTVRMGMEDVVVLNGYRAIKEALVDYKDAFSSRPNNYVLNIVSGSGKN--IAFSKFNQAYKEKRKFAYSALRQLGMRMGPGSMEENIRDEARQLCLKVLSEQR-DAQPR-----DIADNLTVSVANIICSMVFGKRYDYDDEKFLELSKIVNTLVAQV--GSSQLMSVFPYLRFIPG----GRILVEFTNEVLAFLRQEITRHRETLDHDNPRDFIDLLLIELQTHGKTD-FTEENIEWILQDLFIAGTETTVTTLQWGLLYMVLCPEEQQKVQAELDSVLGTDHGVPTLAHRSQLPYTEATIMEIQRIRAIFPLNLPHAPNEDTTFRGYDIPAGTQILPNLWSANMDPEFWPDPAKFDPRRFLDSDGKVVTRPESF---------LPFSTG---------RRVCLGEQLAKMSLFLLFNSMLKHFTFKLPEGATIPSTDGILGITLVPPKVNMCITKR
C3ZPD6/1-434           --------------------------------LTEWRKQYGDVYTVRMGMEDVVVLNGYRAIKEALVDYKDAFSSRPNVYVINLVTGCGKN--IAFSKFNQAYKEKRKFAHSALRNLGMRMGPGSMEENIREEAQQF----------DAHPRDITDNDITDNLTVSVANIICSMVFGKRYDYDDEKFLELSNIISKLAAQL--GSSQLMTVYPFLRFIPG----GRLLVECTNEILAFLRQEITRHRETLDDENPRDFIDLLLIELQTKEKTNYFTEENYEYIILDPFVAGTETTVTTLRWGLLYMVLCPEKQQKVQAELDSVLGTDHDVPTLAHRSQLPYTEATIMEIQRIRAILPLNLPHAPNEETTFRGYDIPAGTQILPNLWSANMDPEFWPDPKKFDPRRFLDSDGKVVTRPESF---------MPFSTG---------RRVCLGEQLAKMSLFLLFSSMLKHFTFKLPEGATVPSTDGILGITLVPPKVNMCITKR
#=GC scorecons         0011110011111111111111111113333355555555555555566666666666566666666666666666645655664565662004223344469699989969998799779979978746977567654406664508856800000986979999989979999999998899569689586668647550089999959877999699333246777865577557796998798968957999999997959987666987789897568777694994799557989989889989889889889999799769899979999979998998998899968399439887796989999899698986677777677776767756767679987787896968970000000006889790000000009969798999997999898978898979767755566555345453365256565445
#=GC scorecons_70      _______________________________________________***********_******************__*__**__*_**___________**_************************_****_***____***___**_**_____***************************__****_*_****_*____******_**********_____*****___**__**************_***********_****__**********__******_**_***__********************************************************_*_**__**********************_*****_*********_***************_*****_________******_________********************************___**__________*___*_*____
#=GC scorecons_80      ______________________________________________________________________________________________________*_******_****_*********_**__***__*___________**__*_____**_**********_*************__*_**_*___*__*____******_*******_**_______*_*____*__***_*******_**_***********_****___***_*****__***__*_**_***__*****************************_**************************_*_**__***_**_*********_****__*****_****_*_**__*_*_**********_*_***__________*****_________**_**************************_**__________________________
#=GC scorecons_90      ______________________________________________________________________________________________________*_******_****_**__**_**_*___*________________**__*_____**_*_********_*************__*_**_*___*_______******_**__***_**_________*_________*_***_***_**__********_*_***____**__****___*____*_**__**___*******_****************_**__*****_*****_**********_***_*_**__***__*_*********_***_________________________***____**_*_**___________***_*_________**_*_*******_*******_*****_*______________________________
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