# STOCKHOLM 1.0
#=GF ID 1.10.620.20/FF/000020
#=GF DE Ribonucleoside-diphosphate reductase small chain
#=GF AC 1.10.620.20/FF/000020
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 36.980
#=GS P42170/13-344      AC P42170
#=GS P42170/13-344      OS Caenorhabditis elegans
#=GS P42170/13-344      DE Ribonucleoside-diphosphate reductase small chain
#=GS P42170/13-344      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS P42170/13-344      DR GO; GO:0009792; 
#=GS P42170/13-344      DR EC; 1.17.4.1; 
#=GS H3FJK2/4-331       AC H3FJK2
#=GS H3FJK2/4-331       OS Pristionchus pacificus
#=GS H3FJK2/4-331       DE Uncharacterized protein
#=GS H3FJK2/4-331       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A2G5UJJ9/2-331   AC A0A2G5UJJ9
#=GS A0A2G5UJJ9/2-331   OS Caenorhabditis nigoni
#=GS A0A2G5UJJ9/2-331   DE Uncharacterized protein
#=GS A0A2G5UJJ9/2-331   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8XX72/2-328       AC A8XX72
#=GS A8XX72/2-328       OS Caenorhabditis briggsae
#=GS A8XX72/2-328       DE Protein CBR-RNR-2
#=GS A8XX72/2-328       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS H3FVE7/5-331       AC H3FVE7
#=GS H3FVE7/5-331       OS Pristionchus pacificus
#=GS H3FVE7/5-331       DE Uncharacterized protein
#=GS H3FVE7/5-331       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A2A6CEM8/17-344  AC A0A2A6CEM8
#=GS A0A2A6CEM8/17-344  OS Pristionchus pacificus
#=GS A0A2A6CEM8/17-344  DE Uncharacterized protein
#=GS A0A2A6CEM8/17-344  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GF SQ 6
P42170/13-344              -----------NAGASVPKHSSNKLKLEKELEKLEIVDQTKAASAEETNNESEVNELDADEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWE-KMNGDEQYFISRILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIRDETERNTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTHSNELISRDEGLHRDFACLLY-SKLQKKLTQQRIYDIIKDAVAIEQEFLTEALPVDMIGMNCRLMSQYIEFVADHLLVELGCDKLYKSKNPFDFMEN-------------------
H3FJK2/4-331               -------------------VSHK-------------VVEKKTVAVE----RTEEHNNDANEPLLVPEDNRFVLFPIKHLAIWQYYKKAVASFWTVEEVDLSQDINDWENKMNENERFFVSRVLAFFAASDGIVNENLVERFCNEVAYQEAKCFYGFQVAIENIHSEMYSLLIETYVKDADEKHKLFNAVKTIPIIGKKADWALRWIADKKSSFAERLIAFACVEGIFFSGSFAAIFWLKKRGLMPGLTHSNELISRDEGLHRDFACMLYRDHIVTKLPLERIHSIIADAVKIEQEYLTESLPVDMIGMNCRLMSQYIEYVADHLLGELELPKLYTTKNPFDFMENISVEGKTNFFEKKVSEYQK
A0A2G5UJJ9/2-331           TLAEIQNVEKENAEPAQQQQQHQSKKQIQDLSKLSI-------------EEPKGNALDADEPLLQDLDNRFVIFPLRHHEIWQFYKKAVASFWTVEEVDLGKDMNDWE-KMNGDEQYFISRVLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEMYSKLIETYIRDEKERMKLFNAIFEFEFIKKKADWALRWISDTKASFAERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTHSNELISRDEGLHRDFACLLY-SMLQNKLSQERIFEIIRDAVAIEQEFLTEALPVDMIGMNCRLMSQYIEFVADHLLQELGCDKLYNVKNPFDFMEN-------------------
A8XX72/2-328               TLAEIQNVEKENAEPA--QHQHQSKKKIQDLTKLSI--------------EPKGNALDADEPLLQDLDNRFVIFPLRHHEIWQFYKKAVASFWTVEEVDLGKDMNDWE-KMNGDEQYFISRVLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEMYSKLIETYIRDEKERMKLFNAIFEFEFIKKKADWALRWISDTKASFAERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTHSNELISRDEGLHRDFACLLY-SMLQNKLSQERIFEIIRDAVAIEQEFLTEALPVDMIGMNCRLMSQYIEFVADHLLQELGCDKLYNVKNPFDFMEN-------------------
H3FVE7/5-331               --------------------SHK-------------IVEKKADVFE----RTEEHNNDANEPLLVPEDNRFVLFPIKHRGIWQFYKKAVASFWTVEEVDLSQDINDWENRMNENERFFVSRVLAFFAASDGIVNENLVERFCNEVAYQEAKCFYGFQVAIENIHSEMYSLLIETYVKDADEKHKLFNAVKTIPIIGKKADWALRWIADKKSSFAERLIAFACVEGIFFSGSFAAIFWLKKRGLMPGLTHSNELISRDEGLHRDFACMLYRDHIVTKLPLERIHSIIADAVKIEQEYLTESLPVDMIGMNCRLMSQYIEYVADHLLGELELPKLFTSKNPFDFMENISVEGKTNFFEKKVSEYQK
A0A2A6CEM8/17-344          -------------------VSHK-------------VVEKKTVAVE----RTEEHNNDANEPLLVPEDNRFVLFPIKHLAIWQYYKKAVASFWTVEEVDLSQDINDWENKMNENERFFVSRVLAFFAASDGIVNENLVERFCNEVAYQEAKCFYGFQVAIENIHSEMYSLLIETYVKDADEKHKLFNAVKTIPIIGKKADWALRWIADKKSSFAERLIAFACVEGIFFSGSFAAIFWLKKRGLMPGLTHSNELISRDEGLHRDFACMLYRDHIVTKLPLERIHSIIADAVKIEQEYLTESLPVDMIGMNCRLMSQYIEYVADHLLGELELPKLYTTKNPFDFMENISVEGKTNFFEKKVSEYQK
#=GC scorecons             0000000000022111001256510200112022122121321113000054645449969979443999996996794499679999999999999999569699991799569679699799999999999999949995999445996599999699999999999499999669549636999972554595999999999959595999999999959999999999959999999999999999999999999999999969915364499447995499499959999799959999999999999999997999999399544998449999999991111111111111111111
#=GC scorecons_70          _____________________*___________________________________**_****___*****_**_**__********************__******_***__*_*********************_***_***___***_*****************_********__**_******_____*_**********_*_*_**********_***********_***********************************______**__***__**_***_********_*************************_**___***__*********___________________
#=GC scorecons_80          _________________________________________________________**_****___*****_**__*__**_*****************__*_****_***__*_**_******************_***_***___**__*****_***********_*****__*__*___****______*_**********_*_*_**********_***********_********************************_**______**__***__**_***_********_*************************_**___***__*********___________________
#=GC scorecons_90          _________________________________________________________**_**_*___*****_**__*__**__****************__*_****__**__*__*_**_***************_***_***___**__*****_***********_*****__*__*___****______*_**********_*_*_**********_***********_********************************_**______**___**__**_***_****_***_******************_******_**___**___*********___________________
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