# STOCKHOLM 1.0
#=GF ID 1.10.601.10/FF/000006
#=GF DE RNA polymerase sigma factor
#=GF AC 1.10.601.10/FF/000006
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 1.549
#=GS Q84LK8/147-409      AC Q84LK8
#=GS Q84LK8/147-409      OS Oryza sativa Japonica Group
#=GS Q84LK8/147-409      DE RNA polymerase sigma factor
#=GS Q84LK8/147-409      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS Q84LK8/147-409      DR GO; GO:0009536; GO:0016987; 
#=GS I1QGT9/147-409      AC I1QGT9
#=GS I1QGT9/147-409      OS Oryza glaberrima
#=GS I1QGT9/147-409      DE RNA polymerase sigma factor
#=GS I1QGT9/147-409      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; 
#=GS A0A0E0ASS2/147-409  AC A0A0E0ASS2
#=GS A0A0E0ASS2/147-409  OS Oryza glumipatula
#=GS A0A0E0ASS2/147-409  DE RNA polymerase sigma factor
#=GS A0A0E0ASS2/147-409  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; 
#=GS A0A0D3GXV6/6-271    AC A0A0D3GXV6
#=GS A0A0D3GXV6/6-271    OS Oryza barthii
#=GS A0A0D3GXV6/6-271    DE RNA polymerase sigma factor
#=GS A0A0D3GXV6/6-271    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; 
#=GS A0A0E0I923/147-409  AC A0A0E0I923
#=GS A0A0E0I923/147-409  OS Oryza sativa f. spontanea
#=GS A0A0E0I923/147-409  DE RNA polymerase sigma factor
#=GS A0A0E0I923/147-409  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; 
#=GF SQ 5
Q84LK8/147-409              ---VSSSPLSVKSSERSDLGTASAVLTKDVALLAEETDILATQLKASQLYSVDSSKSNEELQSKGQVFVRSTRLLERRSKRRYAPRASIADVSCSADNSKKKEKSKKYGRVLEPDEPFKLFLRDRETTEFLTAKEERHLFSKIQILMKIEEAHRKLEVQCGREPTLAEWAEAVGMSSKELQSSIRTGRRCREKMARSNFRLVIHVARKYEGYGLDIQDLVQDGCSGLMKTFEKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRLIR
I1QGT9/147-409              ---VSSSPLSVKSSERSDLGTASAVLTKDVALLAEETDILATQLKASQLYSVDSSKSNEELQSKGQVFVRSTRLLERRSKRRYAPRASIADVSCSADNSKKKEKSKKYGRVLEPDEPFKLFLRDRETTEFLTAKEERHLFSKIQILMKIEEAHRKLEVQCGREPTLAEWAEAVGMSSKELQSSIRTGRRCREKMARSNFRLVIHVARKYEGYGLDIQDLVQDGCSGLMKTFEKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRLIR
A0A0E0ASS2/147-409          ---VSSSPLSVKSSERSDLGTASAVLTKEVALLAEETDILATQLKASQLYSVDSSKSNEELQSKGQVFVRSTRLLERRSKRRYAPRASIADVSCSADNSKKKEKSKKYGRVLEPDEPFKLFLRDRETTEFLTAKEERHLFSKIQILMKIEEAHRKLEVQCGREPTLAEWAEAVGMSSKELQSSIRTGRRCREKMARSNFRLVIHVARKYEGYGLDIQDLVQDGCSGLMKTFEKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRLIR
A0A0D3GXV6/6-271            STSVSSSPLSVKSSERSDLGTASAVLTKDVALLAEETDILATQLKASQLYSVDSSKSNEELQSKGQVFVRSTRLLERRSKRRYAPRASIADVSCSADNSKKKEKSKKYGRVLEPDEPFKLFLRDRETTEFLTAKEERHLFSKIQILMKIEEAHRKLEVQCGREPTLAEWAEAVGMSSKELQSSIRTGRRCREKMARSNFRLVIHVARKYEGYGLDIQDLVQDGCSGLMKTFEKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRLIR
A0A0E0I923/147-409          ---VSSSPLSVKSSERSDLGTASAVLTKDVALLAEETDILATQLKASQLYSVDSSKSNEELQSKGQVFVRSTRLLERRSKRRYAPRASIADVSCSADNSKKKEKSKKYGRVLEPDEPFKLFLRDRETTEFLTAKEERHLFSKIQILMKIEEAHRKLEVQCGREPTLAEWAEAVGMSSKELQSSIRTGRRCREKMARSNFRLVIHVARKYEGYGLDIQDLVQDGCSGLMKTFEKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRLIR
#=GC scorecons              00099999999999999999999999997999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999
#=GC scorecons_70           ___***********************************************************************************************************************************************************************************************************************************************************************
#=GC scorecons_80           ___***********************************************************************************************************************************************************************************************************************************************************************
#=GC scorecons_90           ___*************************_*********************************************************************************************************************************************************************************************************************************************
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