# STOCKHOLM 1.0
#=GF ID 1.10.600.10/FF/000051
#=GF DE Geranylgeranyl diphosphate synthetase
#=GF AC 1.10.600.10/FF/000051
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 84.600
#=GS 1wmwD00/1-330     AC Q5SMD0
#=GS 1wmwD00/1-330     OS Thermus thermophilus HB8
#=GS 1wmwD00/1-330     DE Geranylgeranyl diphosphate synthetase
#=GS 1wmwD00/1-330     DR CATH; 1wmw; D:2-325; 
#=GS 1wmwD00/1-330     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS 1wmwD00/1-330     DR GO; GO:0004311; GO:0033386; 
#=GS Q9RUJ1/7-329      AC Q9RUJ1
#=GS Q9RUJ1/7-329      OS Deinococcus radiodurans R1
#=GS Q9RUJ1/7-329      DE Geranylgeranyl diphosphate synthase
#=GS Q9RUJ1/7-329      DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus; Deinococcus radiodurans; 
#=GS Q9RUJ1/7-329      DR GO; GO:0008299; 
#=GS 1wmwC00/1-330     AC Q5SMD0
#=GS 1wmwC00/1-330     OS Thermus thermophilus HB8
#=GS 1wmwC00/1-330     DE Geranylgeranyl diphosphate synthetase
#=GS 1wmwC00/1-330     DR CATH; 1wmw; C:1-328; 
#=GS 1wmwC00/1-330     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS 1wmwC00/1-330     DR GO; GO:0004311; GO:0033386; 
#=GS 1wmwB00/1-330     AC Q5SMD0
#=GS 1wmwB00/1-330     OS Thermus thermophilus HB8
#=GS 1wmwB00/1-330     DE Geranylgeranyl diphosphate synthetase
#=GS 1wmwB00/1-330     DR CATH; 1wmw; B:2-325; 
#=GS 1wmwB00/1-330     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS 1wmwB00/1-330     DR GO; GO:0004311; GO:0033386; 
#=GS 1wmwA00/1-330     AC Q5SMD0
#=GS 1wmwA00/1-330     OS Thermus thermophilus HB8
#=GS 1wmwA00/1-330     DE Geranylgeranyl diphosphate synthetase
#=GS 1wmwA00/1-330     DR CATH; 1wmw; A:1-328; 
#=GS 1wmwA00/1-330     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS 1wmwA00/1-330     DR GO; GO:0004311; GO:0033386; 
#=GS Q5SMD0/1-330      AC Q5SMD0
#=GS Q5SMD0/1-330      OS Thermus thermophilus HB8
#=GS Q5SMD0/1-330      DE Geranylgeranyl diphosphate synthetase
#=GS Q5SMD0/1-330      DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GS Q5SMD0/1-330      DR GO; GO:0004311; GO:0033386; 
#=GS A3MSH1/1-334      AC A3MSH1
#=GS A3MSH1/1-334      OS Pyrobaculum calidifontis JCM 11548
#=GS A3MSH1/1-334      DE Polyprenyl synthetase
#=GS A3MSH1/1-334      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum calidifontis; 
#=GS A3MSH1/1-334      DR GO; GO:0004311; GO:0033386; 
#=GS A0R029/1-361      AC A0R029
#=GS A0R029/1-361      OS Mycolicibacterium smegmatis MC2 155
#=GS A0R029/1-361      DE Polyprenyl synthetase
#=GS A0R029/1-361      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycolicibacterium; Mycolicibacterium smegmatis; 
#=GS A0R029/1-361      DR GO; GO:0004311; GO:0033386; 
#=GS A0A0D6IJZ6/1-361  AC A0A0D6IJZ6
#=GS A0A0D6IJZ6/1-361  OS Mycolicibacterium smegmatis
#=GS A0A0D6IJZ6/1-361  DE Polyprenyl synthetase
#=GS A0A0D6IJZ6/1-361  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycolicibacterium; Mycolicibacterium smegmatis; 
#=GS Q7X3F5/1-330      AC Q7X3F5
#=GS Q7X3F5/1-330      OS Thermus thermophilus
#=GS Q7X3F5/1-330      DE Geranylgeranyl diphosphate synthetase
#=GS Q7X3F5/1-330      DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus; Thermus thermophilus; 
#=GF SQ 10
1wmwD00/1-330             M---VPAP--------EAIRQALQERLLARLDHPDP---LYRDLLQDYPRRGGKMLRGLLTVYSALAHG-----APLEAGLEAATALELFQNWVLVHDDIEDGSEERRGRPALHRL----------------HPMPLALNAGDAMHAEMWGLLAEGLARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFD----------LRPEDYFRMVAHKAAYYTAVAPLRLGALLAGKTP--PAAYEEGGLRLGTAFQIVDDVLNLEGGEA-YGKERAGDLYEGKR-TLILLRFLEEAPPEERARALALLALPREAKPEAEVGWLLERLLASRALAWAKAEAKRLQAEGLALLEAAFQDLPGKEALDHLRGLLAALVERRA
Q9RUJ1/7-329              ARVLSLLP--------ET--------------SATPELARFYALLRDYPQRGGKGIRSELLLASARAHGLSESDTGWESALWLAAALELFQNWVLVHDDIEDDSEERRGRPALHHL----------------CGMPVALNVGDALHAYMWAAVGKANVPGAFE-----EFLQMVYRTAEGQHLDLAWVEGREWG----------LRPADYLQMVGLKTAHYTVIVPLRLGALAAGMAP--QDAFTPAGLALGTAFQIRDDVLNLAGDPVKYGKEIGGDLLEGKR-TLIVLDWLTTAPDDRKAIFLDQMRRHRADKDPAVIDEIHRWLLESGSVEAAQDYAQAQAAEGLDLLEKALADAPDAQAAAALLASVRELATREK
1wmwC00/1-330             M---VPAP--------EAIRQALQERLLARLDHPDP---LYRDLLQDYPRRGGKMLRGLLTVYSALAHG-----APLEAGLEAATALELFQNWVLVHDDIEDGSEERRGRPALHRL----------------HPMPLALNAGDAMHAEMWGLLAEGLARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFD----------LRPEDYFRMVAHKAAYYTAVAPLRLGALLAGKTP--PAAYEEGGLRLGTAFQIVDDVLNLEGGEA-YGKERAGDLYEGKR-TLILLRFLEEAPPEERARALALLALPREAKPEAEVGWLLERLLASRALAWAKAEAKRLQAEGLALLEAAFQDLPGKEALDHLRGLLAALVERRA
1wmwB00/1-330             M---VPAP--------EAIRQALQERLLARLDHPDP---LYRDLLQDYPRRGGKMLRGLLTVYSALAHG-----APLEAGLEAATALELFQNWVLVHDDIEDGSEERRGRPALHRL----------------HPMPLALNAGDAMHAEMWGLLAEGLARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFD----------LRPEDYFRMVAHKAAYYTAVAPLRLGALLAGKTP--PAAYEEGGLRLGTAFQIVDDVLNLEGGEA-YGKERAGDLYEGKR-TLILLRFLEEAPPEERARALALLALPREAKPEAEVGWLLERLLASRALAWAKAEAKRLQAEGLALLEAAFQDLPGKEALDHLRGLLAALVERRA
1wmwA00/1-330             M---VPAP--------EAIRQALQERLLARLDHPDP---LYRDLLQDYPRRGGKMLRGLLTVYSALAHG-----APLEAGLEAATALELFQNWVLVHDDIEDGSEERRGRPALHRL----------------HPMPLALNAGDAMHAEMWGLLAEGLARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFD----------LRPEDYFRMVAHKAAYYTAVAPLRLGALLAGKTP--PAAYEEGGLRLGTAFQIVDDVLNLEGGEA-YGKERAGDLYEGKR-TLILLRFLEEAPPEERARALALLALPREAKPEAEVGWLLERLLASRALAWAKAEAKRLQAEGLALLEAAFQDLPGKEALDHLRGLLAALVERRA
Q5SMD0/1-330              M---VPAP--------EAIRQALQERLLARLDHPDP---LYRDLLQDYPRRGGKMLRGLLTVYSALAHG-----APLEAGLEAATALELFQNWVLVHDDIEDGSEERRGRPALHRL----------------HPMPLALNAGDAMHAEMWGLLAEGLARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFD----------LRPEDYFRMVAHKAAYYTAVAPLRLGALLAGKTP--PAAYEEGGLRLGTAFQIVDDVLNLEGGEA-YGKERAGDLYEGKR-TLILLRFLEEAPPEERARALALLALPREAKPEAEVGWLLERLLASRALAWAKAEAKRLQAEGLALLEAAFQDLPGKEALDHLRGLLAALVERRA
A3MSH1/1-334              MDVVSRLHQKYGAEVEKALVRYLSIG-LAE---------DFREAVLYQVKTGGKRLRPLLTLAAAEAVS-----GQWRPALPAAAIVELIHNYSLIYDDIIDRGDVRRGLPTVRKA----------------FGDNAAILVGIWYREAIEEAVLDTPKPTLFAKEV----AEVIKAIDEGERLDILFEAAGRSDPYFVQARWREVTLDDYIKMVSLKTGA-LIAAAAKWGVLSVSDDRGLAEAAWNFGMAAGVAFQIIDDVLDIYGDPKKFGKEIGKDIKEHKRGNAVVAVALSHLGEGERRRLLEILA--REVVEEADVREAVALLDSVG----AREEALRLAARYREEAERHLAKIPNNGTLKELLDFIVA---REY
A0R029/1-361              MDTAAPSAVELAGAVTEQLREYLRER-RSDCAYIGPVYAELTAGVEEFVLRGGKRVRPAFAYWGWRSVIEPADAVAGPDVLRLFSALELLQACALIHDDVIDDSATRRGLPTVHRLFTEQHHERGWLGSERQFGLSAAILAGDLALSWADDIVAGADLPVDAHRRVQTVWRHIRTEVLGGQYLDIVTESSGD------------ESVASALNVNTFKTASYTVARPLQLGAAAAADRPDVQELFHRIGNDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKR-TVLLAEALELADASDPAAAALLRRSVGTELSDTQVRELCDAIESVGALAAVEQRIETLTRDALDVLAAANVHPQAKAGLSEL---ARSAANR-T
A0A0D6IJZ6/1-361          MDTAAPSAVELAGAVTEQLREYLRER-RSDCAYIGPVYAELTAGVEEFVLRGGKRVRPAFAYWGWRSVIEPADAVAGPDVLRLFSALELLQACALIHDDVIDDSATRRGLPTVHRLFTEQHHERGWLGSERQFGLSAAILAGDLALSWADDIVAGADLPVDAHRRVQTVWRHIRTEVLGGQYLDIVTESSGD------------ESVASALNVNTFKTASYTVARPLQLGAAAAADRPDVQELFHRIGNDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKR-TVLLAEALELADASDPAAAALLRRSVGTELSDTQVRELCDAIESVGALAAVEQRIETLTRDALDVLAAANVHPQAKAGLSEL---ARSAANR-T
Q7X3F5/1-330              M---VPAP--------EAIRQALQERLLARLDHPDP---LYRDLLQDYPRRGGKMLRGLLTVYSALAHG-----APLEAGLEAATALELFQNWVLVHDDIEDGSEERRGRPALHRL----------------HPMPLALNAGDAMHAEMWGLLAEGLARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFD----------LRPEDYFRMVAHKAAYYTAVAPLRLGALLAGKTP--PAAYEEGGLRLGTAFQIVDDVLNLEGGEA-YGKERAGDLYEGKR-TLILLRFLEEAPPEERARALALLALPREAKPEAEVGWLLERLLASRALAWAKAEAKRLQAEGLALLEAAFQDLPGKEALDHLRGLLAALVERRA
#=GC scorecons            7111454500000010754433634513432233360013544464555469994694465435536440000044344493555779957655967997494754999496676600000000000000004545496469643452534465453354454346223335643454397599653435742300000000004444655465449674665547666975475436004455343944695999649999553965514995365973569907566533953644455645535452264444564844534363455554265446447455464465564354645457449222445343923
#=GC scorecons_70         *_______________*_____*_____________________*_____****__*__*______*_____________*____****_*___******_*_*__***_******_____________________**_***_________*____________*______*______**_***_____*_____________________*___***__*___**_***__*___*_________*__**_****_****___*_____**____**__***_*__*___*__*_____*_______________*_*______*________*______*____*__*__*_________*__*_________*__
#=GC scorecons_80         *_______________*__________________________________***__*_______________________*_____***_*___*_****_*_*__***_*__*_______________________*___*_____________________________________**_**______*_________________________*_*______*___**__*_____________*___*_***__****___*_____**____**___**_*______*__________________________*___________________________________________*__*_________*__
#=GC scorecons_90         ___________________________________________________***__*_______________________*______**_____*__**__*____***_*__________________________*___*_____________________________________*__**________________________________*____________*_________________*___*_***__****___*_____**____*____**________*_________________________________________________________________________*_________*__
//