# STOCKHOLM 1.0 #=GF ID 1.10.565.10/FF/000052 #=GF DE Ultraspiracle nuclear receptor #=GF AC 1.10.565.10/FF/000052 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 81.193 #=GS 2nxxD00/1-235 AC A1JUG2 #=GS 2nxxD00/1-235 OS Tribolium castaneum #=GS 2nxxD00/1-235 DE Ultraspiracle nuclear receptor #=GS 2nxxD00/1-235 DR CATH; 2nxx; D:180-406; #=GS 2nxxD00/1-235 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; #=GS 2nxxC00/1-235 AC A1JUG2 #=GS 2nxxC00/1-235 OS Tribolium castaneum #=GS 2nxxC00/1-235 DE Ultraspiracle nuclear receptor #=GS 2nxxC00/1-235 DR CATH; 2nxx; C:180-404; #=GS 2nxxC00/1-235 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; #=GS 2nxxB00/1-235 AC A1JUG2 #=GS 2nxxB00/1-235 OS Tribolium castaneum #=GS 2nxxB00/1-235 DE Ultraspiracle nuclear receptor #=GS 2nxxB00/1-235 DR CATH; 2nxx; B:178-405; #=GS 2nxxB00/1-235 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; #=GS 2nxxA00/1-235 AC A1JUG2 #=GS 2nxxA00/1-235 OS Tribolium castaneum #=GS 2nxxA00/1-235 DE Ultraspiracle nuclear receptor #=GS 2nxxA00/1-235 DR CATH; 2nxx; A:180-403; #=GS 2nxxA00/1-235 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; #=GS Q5TP98/309-526 AC Q5TP98 #=GS Q5TP98/309-526 OS Anopheles gambiae #=GS Q5TP98/309-526 DE AGAP009890-PA #=GS Q5TP98/309-526 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; #=GS W4YNJ8/401-479_603-723 AC W4YNJ8 #=GS W4YNJ8/401-479_603-723 OS Strongylocentrotus purpuratus #=GS W4YNJ8/401-479_603-723 DE Uncharacterized protein #=GS W4YNJ8/401-479_603-723 DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; #=GS W4ZJQ2/697-922 AC W4ZJQ2 #=GS W4ZJQ2/697-922 OS Strongylocentrotus purpuratus #=GS W4ZJQ2/697-922 DE Uncharacterized protein #=GS W4ZJQ2/697-922 DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; #=GS D6WJH7/173-407 AC D6WJH7 #=GS D6WJH7/173-407 OS Tribolium castaneum #=GS D6WJH7/173-407 DE Ultraspiracle #=GS D6WJH7/173-407 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; #=GS A1JUG2/173-407 AC A1JUG2 #=GS A1JUG2/173-407 OS Tribolium castaneum #=GS A1JUG2/173-407 DE Ultraspiracle nuclear receptor #=GS A1JUG2/173-407 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; #=GS E9HV90/173-398 AC E9HV90 #=GS E9HV90/173-398 OS Daphnia pulex #=GS E9HV90/173-398 DE Uncharacterized protein #=GS E9HV90/173-398 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; #=GS Q4H2U9/258-504 AC Q4H2U9 #=GS Q4H2U9/258-504 OS Ciona intestinalis #=GS Q4H2U9/258-504 DE Nuclear receptor #=GS Q4H2U9/258-504 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS B7PMS2/176-400 AC B7PMS2 #=GS B7PMS2/176-400 OS Ixodes scapularis #=GS B7PMS2/176-400 DE Retinoid X receptor, putative #=GS B7PMS2/176-400 DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; #=GS L7M2M1/206-433 AC L7M2M1 #=GS L7M2M1/206-433 OS Rhipicephalus pulchellus #=GS L7M2M1/206-433 DE Putative retinoid x receptor alpha a #=GS L7M2M1/206-433 DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Rhipicephalus; Rhipicephalus pulchellus; #=GS O61448/174-399 AC O61448 #=GS O61448/174-399 OS Amblyomma americanum #=GS O61448/174-399 DE Retinoid X receptor #=GS O61448/174-399 DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Amblyomminae; Amblyomma; Amblyomma americanum; #=GS A1XQQ1/173-398 AC A1XQQ1 #=GS A1XQQ1/173-398 OS Daphnia magna #=GS A1XQQ1/173-398 DE Retinoic acid receptor RXR-alpha-A #=GS A1XQQ1/173-398 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; #=GS A0A0P6IAN3/251-476 AC A0A0P6IAN3 #=GS A0A0P6IAN3/251-476 OS Daphnia magna #=GS A0A0P6IAN3/251-476 DE Retinoic acid receptor RXR-alpha-A #=GS A0A0P6IAN3/251-476 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; #=GF SQ 16 2nxxD00/1-235 MTSNLQADMPLERIIEAEKRVECNDPLVALVVNEN--NTTVNNICQATHKQLFQLVQWAKLVPHFTSLPLTDQVQLLRAGWNELLIAAFSHRSMQAQDAIVLATGLTVNKSTAHAVGV---GN-------------IYD--RVLSELVNKMKEMKMDKTELGCLRAIILYNPDVRGIKSVQEVEMLREKIYGVLEEYTRTTHPNEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDVPIDTFLMEMLEGTTDS--------------------- 2nxxC00/1-235 MTSNLQADMPLERIIEAEKRVECNDPLVALVVNEN--NTTVNNICQATHKQLFQLVQWAKLVPHFTSLPLTDQVQLLRAGWNELLIAAFSHRSMQAQDAIVLATGLTVNKSTAHAVGV---GN-------------IYD--RVLSELVNKMKEMKMDKTELGCLRAIILYNPDVRGIKSVQEVEMLREKIYGVLEEYTRTTHPNEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDVPIDTFLMEMLEGTTDS--------------------- 2nxxB00/1-235 MTSNLQADMPLERIIEAEKRVECNDPLVALVVNEN--NTTVNNICQATHKQLFQLVQWAKLVPHFTSLPLTDQVQLLRAGWNELLIAAFSHRSMQAQDAIVLATGLTVNKSTAHAVGV---GN-------------IYD--RVLSELVNKMKEMKMDKTELGCLRAIILYNPDVRGIKSVQEVEMLREKIYGVLEEYTRTTHPNEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDVPIDTFLMEMLEGTTDS--------------------- 2nxxA00/1-235 MTSNLQADMPLERIIEAEKRVECNDPLVALVVNEN--NTTVNNICQATHKQLFQLVQWAKLVPHFTSLPLTDQVQLLRAGWNELLIAAFSHRSMQAQDAIVLATGLTVNKSTAHAVGV---GN-------------IYD--RVLSELVNKMKEMKMDKTELGCLRAIILYNPDVRGIKSVQEVEMLREKIYGVLEEYTRTTHPNEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDVPIDTFLMEMLEGTTDS--------------------- Q5TP98/309-526 ---DEDTDQPQNN----------NT--IPSLMNHPFYGQGPETIYETSARLLFMAVKWAKNLPSFASLTFRDQVILLEESWAELFLLNAIQWCMPIDTTACTLFSLNEHCNSANNSGFFKPGQ-------------LAQDLRILNDTLCRFKSVLVDPAEFACMKAIVLFRSEARGLKDPVQIENLQDQ-----AQHSRTQFPGQIARFGRLLLMLPLLRAVNSHKIESIYFQKTIGNTPMEKVLCDMYKN------------------------- W4YNJ8/401-479_603-723 SI------------------IHPYS--VSPNRNMP--LTSHDLLYEGAARLLFMTVKWARGMPAFLTLPFSDQAILLEESWGELFVLGACQWSLSAECGTV---RLLNEPLTPNSTGQLVSAETLNSLKKDQSDTSIQHDVRILQDIVCRVRELQADPMEFACLKALTLFRPDSRGLREVMTVERLQDETQLTLAEYNHAHYLTQRARFGKLLLLLPSVRSVRSK--------------------------------------------------- W4ZJQ2/697-922 ------NDMPVEKILDAELAVEPNN---GPYVDTP--RDPVTNICQAADKQLFTLVEWAKRIPHFTELPLDDQVTLLRAGWNELLIAAFSHRSIQVKDGILLATGLHVHRNSAHSAGV---GT-------------IFD--RVLTELVAKMREMKMDKTELGCLRAIVLFNPDAKNLTSVQKVEELREKVYASLEEYCRNQYTDEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPNNS--------------------- D6WJH7/173-407 STSNLQADMPLERIIEAEKRVECNDPLVALVVNEN--NTTVNNICQATHKQLFQLVQWAKLVPHFTSLPLTDQVQLLRAGWNELLIAAFSHRSMQAQDAIVLATGLTVNKSTAHAVGV---GN-------------IYD--RVLSELVNKMKEMKMDKTELGCLRAIILYNPDVRGIKSVQEVEMLREKIYGVLEEYTRTTHPNEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDVPIDTFLMEMLEGTTDS--------------------- A1JUG2/173-407 STSNLQADMPLERIIEAEKRVECNDPLVALVVNEN--NTTVNNICQATHKQLFQLVQWAKLVPHFTSLPLTDQVQLLRAGWNELLIAAFSHRSMQAQDAIVLATGLTVNKSTAHAVGV---GN-------------IYD--RVLSELVNKMKEMKMDKTELGCLRAIILYNPDVRGIKSVQEVEMLREKIYGVLEEYTRTTHPNEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDVPIDTFLMEMLEGTTDS--------------------- E9HV90/173-398 ----GQGDMPIDRVLEAEKRVECKD---EPQVNSA--TAALGNICAATDKQLFQLVEWAKHIPHFTELPLDDQVVLLRAGWNELLIAAFSHRSVGVKDGIVLATGLVIHRNSAHQAGV---GS-------------IFD--RVLTELVSKMREMKLDLAELGCLRAIILFNPDPKGLKSVSQVEALREKVYATLEEYTRTNYADEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIESFLLEMLEAPA----------------------- Q4H2U9/258-504 -----HDDMPVDKILQAELASDPKM---EELINMQ--EPIDTSVCKAADHQLFTLVEWAKRVPMFGTLPLDDQVTLLRAGWNELLIASFSHRSIEIPDGIILASGLRVYRQSAHSAGV---GA-------------IFD--RVLTELIAKMRDMSMDRTELGCLRAIVLFNPDAKDLTDPAYIETLREKVYASLEVYCKSKYPDQAGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGNTPIDQFLMDKL-APHDTEATSSPSTQATQNNDINLAGV B7PMS2/176-400 ------AEMPLERILEAELRVEPKG---GSAPES---QDPVSSICQAADRQLHQLVEWAKHIPHFVELPLEDRMVLLKAGWNELLIAAFSHRSIGVRDGIVLATGLVVQRHSAHGAGV---GA-------------IFD--RVLTELVAKMREMKMDRTELGCLRAVVLFNPEAKGLRSTAQVEALREKVYAALEEHCRQQYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDNFLLSMLEAPSDA--------------------- L7M2M1/206-433 ------PEMPLERILEAELRVEPHT---GTLSESAQQQDPVSSICQAADRQLHQLVQWAKHIPHFEELPIEDRMVLLKAGWNELLIAAFSHRSIDVRDGIVLATGLVVQRHSAHSAGV---GA-------------IFD--RVLTELVAKMREMKMDRTELGCLRAVVLFNPEAKGLRSTAQVEALREKVYAALEDHCRQQYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDNFLITMLEAPSDA--------------------- O61448/174-399 ------PEMPLERILEAELRVESQT---GTLSESAQQQDPVSSICQAADRQLHQLVQWAKHIPHFEELPLEDRMVLLKAGWNELLIAAFSHRSVDVRDGIVLATGLVVQRHSAHGAGV---GA-------------IFD--RVLTELVAKMREMKMDRTELGCLLAVVLFNPEAKGLRTCPSGGPEGESV-SALEEHCRQQYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDNFLLSMLEAPSD---------------------- A1XQQ1/173-398 ----GQGDMPIDRVLEAEKRVECKD---EPQVNSA--TAALGNICAATDKQLFQLVEWAKHIPHFTELPLDDQVVLLRAGWNELLIAAFSHRSVGVKDGIVLATGLVIHRNSAHQAGV---GS-------------IFD--RVLTELVSKMREMKLDLAELGCLRAIILFNPDPKGLKSVSQVEALREKVYATLEEYTRTNYADEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIESFLLEMLEAPA----------------------- A0A0P6IAN3/251-476 ----GQGDMPIDRVLEAEKRVECKD---EPQVNSA--TAALGNICAATDKQLFQLVEWAKHIPHFTELPLDDQVVLLRAGWNELLIAAFSHRSVGVKDGIVLATGLVIHRNSAHQAGV---GS-------------IFD--RVLTELVSKMREMKLDLAELGCLRAIILFNPDPKGLKSVSQVEALREKVYATLEEYTRTNYADEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIESFLLEMLEAPA----------------------- #=GC scorecons 000012355634443455235534400143346330034444477565466974695998359594497639764995669699776556767535455665546935443676459500073000000000000074600979476747677755945976986966976774776555346837676443366674754654656996899959967977667556556656566546553563455443221000000000000000000000 #=GC scorecons_70 _________*______________________*__________**_*__*_**__*_***__*_*__***_***_**_*********__****______**___**______**__*____*______________*_*__***_***_*****__*__********_*****_***_____**_***_____****_*__*__*_********_********_*__*___*_*_**__*____*_______________________________ #=GC scorecons_80 ___________________________________________*_______*___*_***__*_*__**__**__**___*_**______*_*____________*______*___*____*______________*____***_*_*_*______*__*__**_*__**_**__*_______*_*_*________*_*________**_****_**_****__*___________________________________________________ #=GC scorecons_90 ___________________________________________________*___*_**___*_*__*___*___**___*_**_____________________*__________*________________________*_*____________*__*__*__*__*______________*_______________________**_****_**__*________________________________________________________ //