# STOCKHOLM 1.0
#=GF ID 1.10.472.80/FF/000057
#=GF DE GTPase-activating protein
#=GF AC 1.10.472.80/FF/000057
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 79.680
#=GS P48566/359-551      AC P48566
#=GS P48566/359-551      OS Saccharomyces cerevisiae S288C
#=GS P48566/359-551      DE GTPase-activating protein GYP3
#=GS P48566/359-551      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P48566/359-551      DR GO; GO:0000131; GO:0000133; GO:0000329; GO:0005096; GO:0005737; GO:0005770; GO:0005829; GO:0005886; GO:0005934; GO:0005935; GO:0006887; GO:0006897; GO:0032880; GO:0043087; GO:0070649; GO:0071944; GO:0090630; 
#=GS Q12317/276-472      AC Q12317
#=GS Q12317/276-472      OS Saccharomyces cerevisiae S288C
#=GS Q12317/276-472      DE GTPase-activating protein MSB4
#=GS Q12317/276-472      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS Q12317/276-472      DR GO; GO:0000131; GO:0000133; GO:0005096; GO:0005934; GO:0006887; GO:0070649; 
#=GS A0A1D8PN15/357-509  AC A0A1D8PN15
#=GS A0A1D8PN15/357-509  OS Candida albicans SC5314
#=GS A0A1D8PN15/357-509  DE Rab GTPase-activating protein
#=GS A0A1D8PN15/357-509  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS A0A1H6PH27/458-614  AC A0A1H6PH27
#=GS A0A1H6PH27/458-614  OS Yarrowia lipolytica
#=GS A0A1H6PH27/458-614  DE Rab-GTPase-TBC domain-containing protein
#=GS A0A1H6PH27/458-614  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS Q758G3/344-511      AC Q758G3
#=GS Q758G3/344-511      OS Eremothecium gossypii ATCC 10895
#=GS Q758G3/344-511      DE AEL201Wp
#=GS Q758G3/344-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS R9XI61/344-511      AC R9XI61
#=GS R9XI61/344-511      OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9XI61/344-511      DE AaceriAEL201Wp
#=GS R9XI61/344-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS A0A0L8VI53/359-551  AC A0A0L8VI53
#=GS A0A0L8VI53/359-551  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VI53/359-551  DE MSB3p Rab GTPase-activating protein
#=GS A0A0L8VI53/359-551  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS J8Q3F5/357-549      AC J8Q3F5
#=GS J8Q3F5/357-549      OS Saccharomyces arboricola H-6
#=GS J8Q3F5/357-549      DE Msb3p
#=GS J8Q3F5/357-549      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; 
#=GS H0GM43/359-551      AC H0GM43
#=GS H0GM43/359-551      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GM43/359-551      DE Msb3p
#=GS H0GM43/359-551      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8RBQ0/359-552  AC A0A0L8RBQ0
#=GS A0A0L8RBQ0/359-552  OS Saccharomyces eubayanus
#=GS A0A0L8RBQ0/359-552  DE MSB3-like protein
#=GS A0A0L8RBQ0/359-552  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS C4YQX2/357-511      AC C4YQX2
#=GS C4YQX2/357-511      OS Candida albicans WO-1
#=GS C4YQX2/357-511      DE Uncharacterized protein
#=GS C4YQX2/357-511      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS Q6CDM5/458-614      AC Q6CDM5
#=GS Q6CDM5/458-614      OS Yarrowia lipolytica CLIB122
#=GS Q6CDM5/458-614      DE YALI0B22792p
#=GS Q6CDM5/458-614      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS N1P3X6/274-470      AC N1P3X6
#=GS N1P3X6/274-470      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P3X6/274-470      DE Msb4p
#=GS N1P3X6/274-470      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LIV3/276-472      AC B3LIV3
#=GS B3LIV3/276-472      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LIV3/276-472      DE GTPase-activating protein MSB4
#=GS B3LIV3/276-472      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WMC4/276-472      AC G2WMC4
#=GS G2WMC4/276-472      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WMC4/276-472      DE K7_Msb4p
#=GS G2WMC4/276-472      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GSS4/276-472      AC C7GSS4
#=GS C7GSS4/276-472      OS Saccharomyces cerevisiae JAY291
#=GS C7GSS4/276-472      DE Msb4p
#=GS C7GSS4/276-472      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZN98/276-472      AC A6ZN98
#=GS A6ZN98/276-472      OS Saccharomyces cerevisiae YJM789
#=GS A6ZN98/276-472      DE Multicopy suppression of a budding defect
#=GS A6ZN98/276-472      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VQC4/359-551      AC B5VQC4
#=GS B5VQC4/359-551      OS Saccharomyces cerevisiae AWRI1631
#=GS B5VQC4/359-551      DE YNL293Wp-like protein
#=GS B5VQC4/359-551      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZSI5/359-551      AC A6ZSI5
#=GS A6ZSI5/359-551      OS Saccharomyces cerevisiae YJM789
#=GS A6ZSI5/359-551      DE GTPase-activating protein
#=GS A6ZSI5/359-551      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GS56/359-551      AC C7GS56
#=GS C7GS56/359-551      OS Saccharomyces cerevisiae JAY291
#=GS C7GS56/359-551      DE Msb3p
#=GS C7GS56/359-551      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LPD1/359-551      AC B3LPD1
#=GS B3LPD1/359-551      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LPD1/359-551      DE GTPase activating protein for Ypt6
#=GS B3LPD1/359-551      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1P4V7/359-551      AC N1P4V7
#=GS N1P4V7/359-551      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P4V7/359-551      DE Msb3p
#=GS N1P4V7/359-551      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WLH4/359-551      AC G2WLH4
#=GS G2WLH4/359-551      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WLH4/359-551      DE K7_Msb3p
#=GS G2WLH4/359-551      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GZW0/359-552      AC H0GZW0
#=GS H0GZW0/359-552      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GZW0/359-552      DE Msb3p
#=GS H0GZW0/359-552      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GF SQ 24
P48566/359-551              -NINLEGVNIDQGVLMLCVKEYIPEVWSYIKPS-IDHHQKNNKTFSPSNKKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVSLAVLKL--SEHDLSKIKPRNNSLNYS----WGSNLNQ------RGGSMGQEDSDMEIFQVIQTFPKTLLNPNEIFEKIIFKRRFNLNRLDQDEIDRCRK------
Q12317/276-472              YESDLEGANVDQGVLVLCIKEYLPEIWSHIESSYMNGNGSTDQISGPA--------SGEEYLCRLPTLTLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVALGILKL--SESEFLESKSQKLFRQYSSYTFGGSNDSDSTFKRLKNKIKTQEEADMEILQVIQNFPKRLLNPNDIFEKVLMKKKVALNGITQEKIDRGRE------
A0A1D8PN15/357-509          HSANLEGVHTDQGVLMLCVKEYIPQLWQVLGKN-FDGE----------------TLSEDKILSRLPPVTLVTSSWFMSVFVGILPIETTLRLWDILWYEGSKTIFRFSLTIFKMCSDSPEFNTKQNRRSG---------------------SGSGGGGESEQIELFQFMQNFPKKILDANLLVDLC-FKKIG---------------------
A0A1H6PH27/458-614          HDTNLEGVNVDQGVLMLLVQKSLPAVWRHIGVG-LEG--------APS--------EGMDLVRNLPPITLCTASWFMSVYIGTLPIETTLRIWDCLFYEGSKTLFRIALTLMKQ--SEPEFVGL-----------------------------------NDPMEIFQVVQTSPKSMLDASHLMESC-FKRYNDFGHISQDEIAQLRKIVR-QK
Q758G3/344-511              HNVNLEGVNIDQGVLMLCIKEYLPEFWSRIWPE-SDGKKASN---------------RNEFLYKLPPMTLCTASWFMSCFIGIVPIETTLRIWDCLFYEESHILFKISLAIIRL--SEPEFPQRQRRLKN---------------------------RDDEDMEVFQVIQTFPKSLLDPNDIFDKVIFRKRIRFNSLNQEEIDRCRKYVMGQR
R9XI61/344-511              HNVNLEGVNIDQGVLMLCIKEYLPEFWGRIWPE-SDGKKASN---------------RNEFLYKLPPMTLCTASWFMSCFIGIVPIETTLRIWDCLFYEESHILFKISLAIIKL--SEPEFPQRQRRLKN---------------------------RDDEDMEVFQVIQTFPKSLLDPNDIFDKVIFRKRIRFNSLNQEEIDRCRKYVMGQR
A0A0L8VI53/359-551          -NINLEGVNIDQGVLMLCVKEYIPEVWSYIKPS-IDHHQKNNKTFSPSNKKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVSLAVLKL--SEHDLSKIKPRNNSLNYS----WGSNLNQ------RGGSMGQEDSDMEIFQVIQTFPKTLLNPNEIFEKIIFKRRFNLNRLDQDEIDRCRK------
J8Q3F5/357-549              -NINLEGVNIDQGVLMLCVKEYIPEVWSYIKPS-IDHHQKNNKTFSPSNNKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKFSLAVLKL--SEHELSKIKPRVNSLNHS----WGSNSTQ------RNGPMGQEDSDMEIFQVIQTFPKTLLNPNEIFEKIIFKRRFNLNRLDQDEIDRCRK------
H0GM43/359-551              -NINLEGVNIDQGVLMLCVKEYIPEVWSYIKPS-IDHHQKNNKTFSPSNKKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVSLAVLKL--SEHDLSKIKPRNNSLNYS----WGSNLNQ------RGGSMGQEDSDMEIFQVIQTFPKTLLNPNEIFEKIIFKRRFNLNRLDQDEIDRCRK------
A0A0L8RBQ0/359-552          -NINLEGVNIDQGVLMLCVKEYIPEVWSYIKPS-IDHHQQNNKTFSPSNNKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGIVPIETTLRIWDCLFYEESHFLFKTSLAVLKL--SEHELSKTKPRSNSLNHS----WTSNTNQ------RNGSMGQEDSDMEIFQVIQTFPKTLLNPNEIFEKIIFKRRFNLNRLDQDEIDRCRKF-----
C4YQX2/357-511              HSANLEGVHTDQGVLMLCVKEYIPQLWQVLGKN-FDGE----------------TLSEDKILSRLPPVTLVTSSWFMSVFVGILPIETTLRLWDILWYEGSKTIFRFSLTIFKMCSDSPEFNTKQNRRSG---------------------SGSGGGGESEQIELFQFMQNFPKKILDANLLIDLC-FKKIGGY-------------------
Q6CDM5/458-614              HDTNLEGVNVDQGVLMLLVQKSLPAVWRHIGVG-LEG--------APS--------EGMDLVRNLPPITLCTASWFMSVYIGTLPIETTLRIWDCLFYEGSKTLFRIALTLMKQ--SEPEFVGL-----------------------------------NDPMEIFQVVQTSPKSMLDASHLMESC-FKRYNDFGHISQDEIAQLRKIVR-QK
N1P3X6/274-470              YESDLEGANVDQGVLVLCIKEYLPEIWSHIESSYMNGNGSTDQISGPA--------SGEEYLCRLPTLTLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVALGILKL--SESEFLESKSQKLFRQYSSYTFGGSNDSDSTFKRLKNKIKTQEEADMEILQVIQNFPKRLLNPNDIFEKVLMKKKVALNGITQEKIDRGRE------
B3LIV3/276-472              YESDLEGANVDQGVLVLCIKEYLPEIWSHIESSYMNGNGSTDQISGPT--------SGEEYLCRLPTLTLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVALGILKL--SESEFLESKSQKLFRQYSSYTFGGSNDSDSTFKRLKNKIKTQEEADMEILQVIQNFPKRLLNPNDIFEKVLMKKKVALNGITQEKIDRGRE------
G2WMC4/276-472              YESDLEGANVDQGVLVLCIKEYLPEIWSHIESSYMNGNGSSDQISGPA--------SGEEYLCRLPTLTLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVALGILKL--SESEFLESKSQKLFRQYSSYTFGGSNDSDSTFKRLKNKIKTQEEADMEILQVIQNFPKRLLNPNDIFEKVLMKKKVALNGITQEKIDRGRE------
C7GSS4/276-472              YESDLEGANVDQGVLVLCIKEYLPEIWSHIESSYMNGNGSTDQISGPT--------SGEEYLCRLPTLTLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVALGILKL--SESEFLESKSQKLFRQYSSYTFGGSNDSDSTFKRLKNKIKTQEEADMEILQVIQNFPKRLLNPNDIFEKVLMKKKVALNGITQEKIDRGRE------
A6ZN98/276-472              YESDLEGANVDQGVLVLCIKEYLPEIWSHIESSYMNGNGSTDQISGPT--------SGEEYLCRLPTLTLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVALGILKL--SESEFLESKSQKLFRQYSSYTFGGSNDSDSTFKRLKNKIKTQEEADMEILQVIQNFPKRLLNPNDIFEKVLMKKKVALNGITQEKIDRGRE------
B5VQC4/359-551              -NINLEGVNIDQGVLMLCVKEYIPEVWSYIKPS-IDHHQKNNKTFSPSNKKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVSLAVLKL--SEHDLSKIKPRNNSLNYS----WGSNLNQ------RGGSMGQEDSDMEIFQVIQTFPKTLLNPNEIFEKIIFKRRFNLNRLDQDEIDRCRK------
A6ZSI5/359-551              -NINLEGVNIDQGVLMLCVKEYIPEVWSYIKPS-IDHHQKNNKTFSPSNKKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVSLAVLKL--SEHDLSKIKPRNNSLNYS----WGSNLNQ------RGGSMGQEDSDMEIFQVIQTFPKTLLNPNEIFEKIIFKRRFNLNRLDQDEIDRCRK------
C7GS56/359-551              -NINLEGVNIDQGVLMLCVKEYIPEVWSYIKPS-IDHHQKNNKTFSPSNKKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVSLAVLKL--SEHDLSKIKPRNNSLNYS----WGSNLNQ------RGGSMGQEDSDMEIFQVIQTFPKTLLNPNEIFEKIIFKRRFNLNRLDQDEIDRCRK------
B3LPD1/359-551              -NINLEGVNIDQGVLMLCVKEYIPEVWSYIKPS-IDHHQKNNKTFSPSNKKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVSLAVLKL--SEHDLSKIKPRNNSLNYS----WGSNLNQ------RGGSMGQEDSDMEIFQVIQTFPKTLLNPNEIFEKIIFKRRFNLNRLDQDEIDRCRK------
N1P4V7/359-551              -NINLEGVNIDQGVLMLCVKEYIPEVWSYIKPS-IDHHQKNNKTFSPSNKKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVSLAVLKL--SEHDLSKIKPRNNSLNYS----WGSNLNQ------RGGSMGQEDSDMEIFQVIQTFPKTLLNPNEIFEKIIFKRRFNLNRLDQDEIDRCRK------
G2WLH4/359-551              -NINLEGVNIDQGVLMLCVKEYIPEVWSYIKPS-IDHHQKNNKTFSPSNNKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVSLAVLKL--SEHDLSKIKPRNNSLNYS----WGSNLNQ------RGGSMGQEDSDMEIFQVIQTFPKTLLNPNEIFEKIIFKRRFNLNRLDQDEIDRCRK------
H0GZW0/359-552              -NINLEGVNIDQGVLMLCVKEYIPEIWSYIKPS-IDHHQKNNKTFSPSNNKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHFLFKVSLAVLKL--SEHELSKIKPRNNSLNYS----WGSNLNQ------KNGLMGQEDNDMEIFQVIQTFPKTLLNPNEIFEKIIFKRRFNLNKLDQDEIDRCRKF-----
#=GC scorecons              254799967699999797777769659547445046532223222353101111113446574699659979799999687967999999979979799696579756956686007747634353533312330000233312200000033222346546797797796799469667476755368743355343654655364000000
#=GC scorecons_70           ___******_***************_*__*_____*_______________________*_*_****_**********_***********************_***_**_*_**__**_**_________________________________________********_***_*****_***___***________*__*___*_______
#=GC scorecons_80           ____***_*_*****_*_****_*__*__*_______________________________*__**__**_*******_***__**********_****_*__***__*___*___**_*__________________________________________**__**_*_***__*__*___*____*________________________
#=GC scorecons_90           ____***___*****_*______*__*_____________________________________**__**_*_*****_*_*__*******_**_*_**_*___*___*___*__________________________________________________*__*__*__**__*___________*________________________
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